Click here to switch to the map view.

The map label for this gene is 75675512

Identifier: 75675512

GI number: 75675512

Start: 1451258

End: 1452052

Strand: Direct

Name: 75675512

Synonym: Nwi_1320

Alternate gene names: NA

Gene position: 1451258-1452052 (Clockwise)

Preceding gene: 75675511

Following gene: 75675513

Centisome position: 42.66

GC content: 62.26

Gene sequence:

>795_bases
TTGGACTCCCCCCCAGATCCATCGTCAGAACGTCCGCCGGAACCTCCGCGTGAACCGATCCTGACCCTGCCGGGGCCGTT
GACCGCCTATATCGGCCTTCTGGCGGCCATTCATGTTATGTGGTCGTCTGTTCCGCCTGATCTGGAATATTGGATCATCG
AGGCGTTCGGCTTCATTCCGAAGCGGTACGATCCGAGTCTCCTGGCGACGGCGTTTCCAGGAGGAAGCGGCGCCAAGGTC
TGGACCTTCGTGACCTATTCGCTGCTGCACGCCAATCTCAGTCACATCGGTTTCAATATTTTGTGGTTGCTGCCCTTCGG
CAGCGCGCTGGCGCGCCGTTTCGGCGGCTTCAGGTTTTTTCTTTTCATGGCGGTAGCCGCCGTCGCCGGCGCGGCCGCGC
ATCTTGTAACCCACGAGCATAGTATCGCGCCGATGATCGGTGCGTCAGGATCGGTGTCCGGCGCGATGGCCGCGTCGATC
CGGTTCGCCTTCGCGCAGGGAAGCTTTCTGTCCTTCGGGCGCGGCGATGCCGACGCCGCCGCGCAGGTGCCGGCGCTGTC
GTTGACGCGCGCATTGCAAAACCCCCGCGTGCTCGCGTTCCTCGCGGTCTGGTTTGGTATCAACATCATCTTCGGCATGG
GATCGATCGCGATCGGCTCCGAGCCCGGCAGCGTTGCGTGGCAAGCTCACATGGGCGGCTTTATGGCGGGCCTTCTATTG
TTTTCGTTGTTTGATCCGGTGCCTCGTCCGGCGCGCGACCCCGACGACGCGTCTTCCGGGGCGGATCATTTTTAA

Upstream 100 bases:

>100_bases
ATTTGATGGGTTTCATCAGCCGGATCGAACCTCGTTTGCACAATCTCCTTATGCAGCTTATTCAGCCTATCGTCCCCTTG
AGCCCGTCAGGTCGCCGCCC

Downstream 100 bases:

>100_bases
CGACGGCTTGCGATGCAGGCTGATTTCATTCATCATCCACTCGGTCAGGCGAGTTTGAATCCGTTCTCGTGATGGAAACG
ATGCCCCTGTCGGTGCGTTT

Product: rhomboid-like protein

Products: NA

Alternate protein names: Rhomboid-Like Protein; Peptidase; Rhombiod Family Transmembrane Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MDSPPDPSSERPPEPPREPILTLPGPLTAYIGLLAAIHVMWSSVPPDLEYWIIEAFGFIPKRYDPSLLATAFPGGSGAKV
WTFVTYSLLHANLSHIGFNILWLLPFGSALARRFGGFRFFLFMAVAAVAGAAAHLVTHEHSIAPMIGASGSVSGAMAASI
RFAFAQGSFLSFGRGDADAAAQVPALSLTRALQNPRVLAFLAVWFGINIIFGMGSIAIGSEPGSVAWQAHMGGFMAGLLL
FSLFDPVPRPARDPDDASSGADHF

Sequences:

>Translated_264_residues
MDSPPDPSSERPPEPPREPILTLPGPLTAYIGLLAAIHVMWSSVPPDLEYWIIEAFGFIPKRYDPSLLATAFPGGSGAKV
WTFVTYSLLHANLSHIGFNILWLLPFGSALARRFGGFRFFLFMAVAAVAGAAAHLVTHEHSIAPMIGASGSVSGAMAASI
RFAFAQGSFLSFGRGDADAAAQVPALSLTRALQNPRVLAFLAVWFGINIIFGMGSIAIGSEPGSVAWQAHMGGFMAGLLL
FSLFDPVPRPARDPDDASSGADHF
>Mature_264_residues
MDSPPDPSSERPPEPPREPILTLPGPLTAYIGLLAAIHVMWSSVPPDLEYWIIEAFGFIPKRYDPSLLATAFPGGSGAKV
WTFVTYSLLHANLSHIGFNILWLLPFGSALARRFGGFRFFLFMAVAAVAGAAAHLVTHEHSIAPMIGASGSVSGAMAASI
RFAFAQGSFLSFGRGDADAAAQVPALSLTRALQNPRVLAFLAVWFGINIIFGMGSIAIGSEPGSVAWQAHMGGFMAGLLL
FSLFDPVPRPARDPDDASSGADHF

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27980; Mature: 27980

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSPPDPSSERPPEPPREPILTLPGPLTAYIGLLAAIHVMWSSVPPDLEYWIIEAFGFIP
CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
KRYDPSLLATAFPGGSGAKVWTFVTYSLLHANLSHIGFNILWLLPFGSALARRFGGFRFF
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHCCHHHH
LFMAVAAVAGAAAHLVTHEHSIAPMIGASGSVSGAMAASIRFAFAQGSFLSFGRGDADAA
HHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHH
AQVPALSLTRALQNPRVLAFLAVWFGINIIFGMGSIAIGSEPGSVAWQAHMGGFMAGLLL
HHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEHHHHHHHHHHHHH
FSLFDPVPRPARDPDDASSGADHF
HHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDSPPDPSSERPPEPPREPILTLPGPLTAYIGLLAAIHVMWSSVPPDLEYWIIEAFGFIP
CCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC
KRYDPSLLATAFPGGSGAKVWTFVTYSLLHANLSHIGFNILWLLPFGSALARRFGGFRFF
CCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHHHHHHCCHHHH
LFMAVAAVAGAAAHLVTHEHSIAPMIGASGSVSGAMAASIRFAFAQGSFLSFGRGDADAA
HHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHH
AQVPALSLTRALQNPRVLAFLAVWFGINIIFGMGSIAIGSEPGSVAWQAHMGGFMAGLLL
HHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEHHHHHHHHHHHHH
FSLFDPVPRPARDPDDASSGADHF
HHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA