| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is purL [H]
Identifier: 75675500
GI number: 75675500
Start: 1440187
End: 1442400
Strand: Direct
Name: purL [H]
Synonym: Nwi_1308
Alternate gene names: 75675500
Gene position: 1440187-1442400 (Clockwise)
Preceding gene: 75675499
Following gene: 75675501
Centisome position: 42.33
GC content: 65.09
Gene sequence:
>2214_bases GTGATTGTCCGCAACGAACCTCCAATCACGCCTGAACTCGTCGCCTCGCACGGCCTCAAGCCGGACGAGTATGAGCGCAT CCTGAAGCTGCTCGGCCGGACGCCGACATTCACCGAACTCGGTATCTTCTCGGCGATGTGGAACGAGCATTGCTCGTACA AGTCCTCGCGTATCCATCTGCGCGGGCTGCCGACGAAGGCGCCTTGGGTGATCCAGGGCCCCGGCGAGAATGCCGGCGTC ATCGACATCGGCGACGGGCAGGCGGTGGTGTTCAAGATGGAGAGCCACAACCATCCGAGCTACATCGAGCCTTATCAGGG CGCGACCACCGGCGTCGGCGGCATCCTGCGCGATGTCTTCACCATGGGCGCGCGCCCGATCGCCTGCCTTAACGCGCTGA GCTTCGGTGATCCGTCGCATCCGAAAACGCGACACCTCGTCTCCGGCGTGGTGGCTGGCGTCGGCGGCTACGGCAATTCG TTCGGGGTGCCGACCGTGGGCGGGCAGGTGCGCTTTCACACCCGCTATGACGGCAACATCCTCGTCAACGCCATGGCGGT CGGTCTCGCCGATGCCGACAGGATTTTCTATGCGGCGGCGTCGGGCGTGAACATGCCGATCGTCTATCTCGGCTCCAAGA CCGGCCGCGACGGCATCCACGGCGCGACCATGGCGTCGGCCGAGTTCGACGACGACAGCGAGGAGAAGCGTCCGACCGTT CAGGTCGGCGATCCCTTCGCTGAAAAGCTGCTGCTGGAAGCCTGTCTCGAAATCATGGCGAAGGGATGCGTCGTCGCCAT CCAGGACATGGGCGCGGCGGGGCTGACGTGCTCGGCGGTGGAAATGGGCGCCAAGGGCGATCTCGGCGTCGATCTCGATC TCGACAGCGTGCCGACGCGCGAAACCGGCATGAGCGCCTACGAGATGATGCTTTCGGAGAGCCAGGAGCGGATGCTCATG GTGCTCAAGCCCGAGAAGGAAAAGGAAGCGGAGGCGATCTTCAGGAAGTGGGGGCTCGATTTCGCGATTGTCGGCTCCAC CACGCCGGGCAGGCGCTTCGTGGTTCGGCACGGCGGCGATGTGATGGCCGACCTGCCGATCAAGGAGCTTGAATCGGAAG CGCCCTTGTATGACCGGCCGCATGTGCCGTCGCCGCAATTGCCCGTCATTCAGGCGCGCGACGTCGCGCCGTCCCTGACG ACAGCCGACGCGCTGGAGAAGCTGCTCGCGATGCCCGAACTGTGCTCCAAGCGCTGGGTATGGGAGCAGTACGACCATGT CATCGGCGGCAACACGGTGCAGCGTCCCGGCGGCGATGCGGCGGTGGTGCGCGTCGAGGACGGGCCGAAGGGTCTCGCGC TGACGGTTGATGTGACGCCGCGCTATTGCGAGGCCGATCCGTTTGAGGGCGGCAAGCAGGCGGTGGCCGAAGCCTGGCGC AACATCACGGCAGTCGGCGGACGTCCGCTGGCGATCACCGACAACCTGAACTTCGGCAATCCGGAACGGCCTGAGAACAT GGGCCAGTTCGTCGGCTGCCTGAAAGGCATCGCGGCGGCCTGCACCGCGCTGGATTTCCCGGTCGTGTCCGGCAACGTCT CCCTTTATAACGAGACTAACGGCCGCGGCATTCTGCCGACGCCCACCATCGGCGGCGTCGGGCTGCTCGATGACTTCACG AAATCGGCCTCGCTTGCCTTCAAGGCAGAGGGGCATCCGATCCTGCTGATCGGCGACACCCAGGGATGGCTCGGCCAGTC GGTTTACCTGCGCGACATTTGCCGGCGCGAGGAGGGAGCGCCGCCGCCGGTCGATCTCGCCGCGGAGAAGCGCAACGGCG ATGTGGTGCGCGGCATGATCCACGCCGGCACCGCGACGGCCGTTCATGACGTGTCTGACGGCGGGCTTCTCGTCGCGCTG GCGGAAATGGCGATGGCTGATGGCATCGGCGCGGCACTCGATGCCGCTCCGGCGGCGATCGTGCCGTATGCGTGGTGGTT CGGCGAGGATCAGGCGCGCTATATCGTGACCGTTCACGAGCGGGATCTGTTGAGCGTTTTTACCAAGCTCAAGGCGGTGA ACGTGCCCTGCATTCAGATCGGGCTCACGGGTGGTCATGAGATCGCTATCGCAGGCGAGCGCGCTGTCGACCTCAAGGTC TTGCGGCAAGGCTTTGAAAGCTGGCTGCCGGACTACATGGCCGGAAAGCCGTGA
Upstream 100 bases:
>100_bases TAAATCGATCCGGCCATATGCTGAGCCAAGATAGAGATGTTATTATTCAGACGGCGAGAAAAATAATAGGGTTAGACAGT GGCTCTGGAGCCTGCTTGTA
Downstream 100 bases:
>100_bases TGCGCCGGGAGACGACGTATGGCGCACGCGGTTGCGGCGAACACGCAGGCGCGGGCCGTCTTGCCGCGGCCGTCTTGCGG TTGAACCGGTTCGTGCAAAT
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II [H]
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MIVRNEPPITPELVASHGLKPDEYERILKLLGRTPTFTELGIFSAMWNEHCSYKSSRIHLRGLPTKAPWVIQGPGENAGV IDIGDGQAVVFKMESHNHPSYIEPYQGATTGVGGILRDVFTMGARPIACLNALSFGDPSHPKTRHLVSGVVAGVGGYGNS FGVPTVGGQVRFHTRYDGNILVNAMAVGLADADRIFYAAASGVNMPIVYLGSKTGRDGIHGATMASAEFDDDSEEKRPTV QVGDPFAEKLLLEACLEIMAKGCVVAIQDMGAAGLTCSAVEMGAKGDLGVDLDLDSVPTRETGMSAYEMMLSESQERMLM VLKPEKEKEAEAIFRKWGLDFAIVGSTTPGRRFVVRHGGDVMADLPIKELESEAPLYDRPHVPSPQLPVIQARDVAPSLT TADALEKLLAMPELCSKRWVWEQYDHVIGGNTVQRPGGDAAVVRVEDGPKGLALTVDVTPRYCEADPFEGGKQAVAEAWR NITAVGGRPLAITDNLNFGNPERPENMGQFVGCLKGIAAACTALDFPVVSGNVSLYNETNGRGILPTPTIGGVGLLDDFT KSASLAFKAEGHPILLIGDTQGWLGQSVYLRDICRREEGAPPPVDLAAEKRNGDVVRGMIHAGTATAVHDVSDGGLLVAL AEMAMADGIGAALDAAPAAIVPYAWWFGEDQARYIVTVHERDLLSVFTKLKAVNVPCIQIGLTGGHEIAIAGERAVDLKV LRQGFESWLPDYMAGKP
Sequences:
>Translated_737_residues MIVRNEPPITPELVASHGLKPDEYERILKLLGRTPTFTELGIFSAMWNEHCSYKSSRIHLRGLPTKAPWVIQGPGENAGV IDIGDGQAVVFKMESHNHPSYIEPYQGATTGVGGILRDVFTMGARPIACLNALSFGDPSHPKTRHLVSGVVAGVGGYGNS FGVPTVGGQVRFHTRYDGNILVNAMAVGLADADRIFYAAASGVNMPIVYLGSKTGRDGIHGATMASAEFDDDSEEKRPTV QVGDPFAEKLLLEACLEIMAKGCVVAIQDMGAAGLTCSAVEMGAKGDLGVDLDLDSVPTRETGMSAYEMMLSESQERMLM VLKPEKEKEAEAIFRKWGLDFAIVGSTTPGRRFVVRHGGDVMADLPIKELESEAPLYDRPHVPSPQLPVIQARDVAPSLT TADALEKLLAMPELCSKRWVWEQYDHVIGGNTVQRPGGDAAVVRVEDGPKGLALTVDVTPRYCEADPFEGGKQAVAEAWR NITAVGGRPLAITDNLNFGNPERPENMGQFVGCLKGIAAACTALDFPVVSGNVSLYNETNGRGILPTPTIGGVGLLDDFT KSASLAFKAEGHPILLIGDTQGWLGQSVYLRDICRREEGAPPPVDLAAEKRNGDVVRGMIHAGTATAVHDVSDGGLLVAL AEMAMADGIGAALDAAPAAIVPYAWWFGEDQARYIVTVHERDLLSVFTKLKAVNVPCIQIGLTGGHEIAIAGERAVDLKV LRQGFESWLPDYMAGKP >Mature_737_residues MIVRNEPPITPELVASHGLKPDEYERILKLLGRTPTFTELGIFSAMWNEHCSYKSSRIHLRGLPTKAPWVIQGPGENAGV IDIGDGQAVVFKMESHNHPSYIEPYQGATTGVGGILRDVFTMGARPIACLNALSFGDPSHPKTRHLVSGVVAGVGGYGNS FGVPTVGGQVRFHTRYDGNILVNAMAVGLADADRIFYAAASGVNMPIVYLGSKTGRDGIHGATMASAEFDDDSEEKRPTV QVGDPFAEKLLLEACLEIMAKGCVVAIQDMGAAGLTCSAVEMGAKGDLGVDLDLDSVPTRETGMSAYEMMLSESQERMLM VLKPEKEKEAEAIFRKWGLDFAIVGSTTPGRRFVVRHGGDVMADLPIKELESEAPLYDRPHVPSPQLPVIQARDVAPSLT TADALEKLLAMPELCSKRWVWEQYDHVIGGNTVQRPGGDAAVVRVEDGPKGLALTVDVTPRYCEADPFEGGKQAVAEAWR NITAVGGRPLAITDNLNFGNPERPENMGQFVGCLKGIAAACTALDFPVVSGNVSLYNETNGRGILPTPTIGGVGLLDDFT KSASLAFKAEGHPILLIGDTQGWLGQSVYLRDICRREEGAPPPVDLAAEKRNGDVVRGMIHAGTATAVHDVSDGGLLVAL AEMAMADGIGAALDAAPAAIVPYAWWFGEDQARYIVTVHERDLLSVFTKLKAVNVPCIQIGLTGGHEIAIAGERAVDLKV LRQGFESWLPDYMAGKP
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family [H]
Homologues:
Organism=Homo sapiens, GI31657129, Length=685, Percent_Identity=25.5474452554745, Blast_Score=122, Evalue=2e-27, Organism=Escherichia coli, GI48994899, Length=755, Percent_Identity=24.635761589404, Blast_Score=127, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17553022, Length=438, Percent_Identity=24.2009132420091, Blast_Score=92, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6321498, Length=736, Percent_Identity=23.2336956521739, Blast_Score=111, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 78780; Mature: 78780
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRNEPPITPELVASHGLKPDEYERILKLLGRTPTFTELGIFSAMWNEHCSYKSSRIHL CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEE RGLPTKAPWVIQGPGENAGVIDIGDGQAVVFKMESHNHPSYIEPYQGATTGVGGILRDVF EECCCCCCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH TMGARPIACLNALSFGDPSHPKTRHLVSGVVAGVGGYGNSFGVPTVGGQVRFHTRYDGNI HHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCE LVNAMAVGLADADRIFYAAASGVNMPIVYLGSKTGRDGIHGATMASAEFDDDSEEKRPTV EEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCHHCCCEE QVGDPFAEKLLLEACLEIMAKGCVVAIQDMGAAGLTCSAVEMGAKGDLGVDLDLDSVPTR EECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHEECCCCCCCCEEECCCCCCCC ETGMSAYEMMLSESQERMLMVLKPEKEKEAEAIFRKWGLDFAIVGSTTPGRRFVVRHGGD HHCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCC VMADLPIKELESEAPLYDRPHVPSPQLPVIQARDVAPSLTTADALEKLLAMPELCSKRWV EEECCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC WEQYDHVIGGNTVQRPGGDAAVVRVEDGPKGLALTVDVTPRYCEADPFEGGKQAVAEAWR HHHHHHHHCCCEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH NITAVGGRPLAITDNLNFGNPERPENMGQFVGCLKGIAAACTALDFPVVSGNVSLYNETN CEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEECCC GRGILPTPTIGGVGLLDDFTKSASLAFKAEGHPILLIGDTQGWLGQSVYLRDICRREEGA CCEECCCCCCCCCCHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCC PPPVDLAAEKRNGDVVRGMIHAGTATAVHDVSDGGLLVALAEMAMADGIGAALDAAPAAI CCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHCCCCHH VPYAWWFGEDQARYIVTVHERDLLSVFTKLKAVNVPCIQIGLTGGHEIAIAGERAVDLKV HCEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHHHHHH LRQGFESWLPDYMAGKP HHHHHHHHCCHHHCCCC >Mature Secondary Structure MIVRNEPPITPELVASHGLKPDEYERILKLLGRTPTFTELGIFSAMWNEHCSYKSSRIHL CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEE RGLPTKAPWVIQGPGENAGVIDIGDGQAVVFKMESHNHPSYIEPYQGATTGVGGILRDVF EECCCCCCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHH TMGARPIACLNALSFGDPSHPKTRHLVSGVVAGVGGYGNSFGVPTVGGQVRFHTRYDGNI HHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCE LVNAMAVGLADADRIFYAAASGVNMPIVYLGSKTGRDGIHGATMASAEFDDDSEEKRPTV EEEEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCEEECCCCCCCCHHCCCEE QVGDPFAEKLLLEACLEIMAKGCVVAIQDMGAAGLTCSAVEMGAKGDLGVDLDLDSVPTR EECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEHHEECCCCCCCCEEECCCCCCCC ETGMSAYEMMLSESQERMLMVLKPEKEKEAEAIFRKWGLDFAIVGSTTPGRRFVVRHGGD HHCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCC VMADLPIKELESEAPLYDRPHVPSPQLPVIQARDVAPSLTTADALEKLLAMPELCSKRWV EEECCCHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCC WEQYDHVIGGNTVQRPGGDAAVVRVEDGPKGLALTVDVTPRYCEADPFEGGKQAVAEAWR HHHHHHHHCCCEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHH NITAVGGRPLAITDNLNFGNPERPENMGQFVGCLKGIAAACTALDFPVVSGNVSLYNETN CEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEECCC GRGILPTPTIGGVGLLDDFTKSASLAFKAEGHPILLIGDTQGWLGQSVYLRDICRREEGA CCEECCCCCCCCCCHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCCC PPPVDLAAEKRNGDVVRGMIHAGTATAVHDVSDGGLLVALAEMAMADGIGAALDAAPAAI CCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHCCCCHH VPYAWWFGEDQARYIVTVHERDLLSVFTKLKAVNVPCIQIGLTGGHEIAIAGERAVDLKV HCEEEECCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHHHHHH LRQGFESWLPDYMAGKP HHHHHHHHCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA