| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is cynS [H]
Identifier: 75675494
GI number: 75675494
Start: 1436341
End: 1436829
Strand: Direct
Name: cynS [H]
Synonym: Nwi_1302
Alternate gene names: 75675494
Gene position: 1436341-1436829 (Clockwise)
Preceding gene: 75675492
Following gene: 162139848
Centisome position: 42.22
GC content: 59.71
Gene sequence:
>489_bases ATGAAGCGATCCGACCTCACCGAAAAGATTCTCGACATCAAGCGCGAGAAGGAATGGAGCTGGTCATACATCGCCGGCGA GATCGGCGGTTGTTCCGATATCCTGATCGTCAGCGCATTGCTCGGCCACATGAAGCTGACCAAGTCGCAGGCGGCGGTTG CCGGAAAGCTGTTCGGCCTTTCCAAGACGGAAATCGCGATGCTCAACGAGGTGCCTGTGCGCGGCGCGGGCGTTCCCATG CCGCCGACCGATCCCTTGATCTATCGCCTGTACGAACTGGTAATGATCAACGGACCGGCGCTGAAAGTGCTGATCGAGGA AGAGTTTGGCGATGGCATCATGTCGGCGATCGACTTCGACCTCGAGCTTGCGCGCGTCGCCAGCCCGAAGGGCGATCGCG TCAAGATCGGCATGTGCGGCAAGTTCCTTCCGTTCAAGTATACCGCCGCCAGCGAGCAGCATCGGGAGCGTCACCTCGAA GAGGCCTGA
Upstream 100 bases:
>100_bases CTTCTGGCCTTCAAACCCCGTATTCCAGCCGAATCCGCCATGGCACGGGCATTGCAATGGATGGGTGGTCCAAGGCTAGC TTTTCAGACGGGAGACAACG
Downstream 100 bases:
>100_bases TTCAACTGCGTTGGATCAGAGCCCTCGCTTATCTTTTTGTTCGAACATGATCTTATCGGATCATGTTCTAACGGCTCGAC CCGGCTTGGTTATCGTGGAG
Product: cyanate hydratase
Products: NA
Alternate protein names: Cyanase; Cyanate hydrolase; Cyanate lyase [H]
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKRSDLTEKILDIKREKEWSWSYIAGEIGGCSDILIVSALLGHMKLTKSQAAVAGKLFGLSKTEIAMLNEVPVRGAGVPM PPTDPLIYRLYELVMINGPALKVLIEEEFGDGIMSAIDFDLELARVASPKGDRVKIGMCGKFLPFKYTAASEQHRERHLE EA
Sequences:
>Translated_162_residues MKRSDLTEKILDIKREKEWSWSYIAGEIGGCSDILIVSALLGHMKLTKSQAAVAGKLFGLSKTEIAMLNEVPVRGAGVPM PPTDPLIYRLYELVMINGPALKVLIEEEFGDGIMSAIDFDLELARVASPKGDRVKIGMCGKFLPFKYTAASEQHRERHLE EA >Mature_162_residues MKRSDLTEKILDIKREKEWSWSYIAGEIGGCSDILIVSALLGHMKLTKSQAAVAGKLFGLSKTEIAMLNEVPVRGAGVPM PPTDPLIYRLYELVMINGPALKVLIEEEFGDGIMSAIDFDLELARVASPKGDRVKIGMCGKFLPFKYTAASEQHRERHLE EA
Specific function: Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide [H]
COG id: COG1513
COG function: function code P; Cyanate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cyanase family [H]
Homologues:
Organism=Escherichia coli, GI1786535, Length=145, Percent_Identity=40, Blast_Score=104, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008076 - InterPro: IPR003712 - InterPro: IPR010982 [H]
Pfam domain/function: PF02560 Cyanate_lyase [H]
EC number: =4.2.1.104 [H]
Molecular weight: Translated: 17920; Mature: 17920
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRSDLTEKILDIKREKEWSWSYIAGEIGGCSDILIVSALLGHMKLTKSQAAVAGKLFGL CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKTEIAMLNEVPVRGAGVPMPPTDPLIYRLYELVMINGPALKVLIEEEFGDGIMSAIDFD CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCC LELARVASPKGDRVKIGMCGKFLPFKYTAASEQHRERHLEEA HHHHHHCCCCCCEEEEEECCCCCCEEECCCCHHHHHHCCCCC >Mature Secondary Structure MKRSDLTEKILDIKREKEWSWSYIAGEIGGCSDILIVSALLGHMKLTKSQAAVAGKLFGL CCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC SKTEIAMLNEVPVRGAGVPMPPTDPLIYRLYELVMINGPALKVLIEEEFGDGIMSAIDFD CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCC LELARVASPKGDRVKIGMCGKFLPFKYTAASEQHRERHLEEA HHHHHHCCCCCCEEEEEECCCCCCEEECCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA