| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675470
Identifier: 75675470
GI number: 75675470
Start: 1410836
End: 1411714
Strand: Direct
Name: 75675470
Synonym: Nwi_1278
Alternate gene names: NA
Gene position: 1410836-1411714 (Clockwise)
Preceding gene: 75675469
Following gene: 75675472
Centisome position: 41.47
GC content: 54.95
Gene sequence:
>879_bases ATGGCTCAAAAGCCGTCGAAAATTCGCGAATTTCAGAAGCGGTTCCCTGATGAAGAGGCTTGCCTGACGCATTTGATGCG CACCCGGTTTGGCGAACGTCTGACCTGCTTCAAGTGTCAGAAGCAGGCGACCTATTACCGGGTCAAAAACCGCCGCTCCT TTGAGTGCGAGCATTGCGGCTATCAGGTGTATCCGACTGCCGGAACGCCGTTCGAAAAGACACGCACCAGCCTGCGGGAT TGGTTCTATGTCATGTTTCTGTTCTGCGAGACGCGGAACGGCGTGGCCGCGAAAGAAGTGCAGCGTCAGCTAGGCGTGAC CTACAAGACCGCTTGGCGCATGTGCCATCTTATCCGGCTCTATATGGGCTACGTCGATGGCGACTATCCAATGGGCGGGC CCGGTAAGACCGTTGAGGCGGACGAAACGTTCATCGGCGGCAAGGACAAGGCTGGCAAAGACGACAAAGCAATTGTCATG GGGATGATCGAGCGTGGTGGCGATGTCGTTACGCGCGTCGTCCATGCTCGTACAAAGGCGCATATCTTGCCGCACATCGT TCGGTTTGTGAAAGAAGGTTCGCGCGTCCACACGGACGAGGCGTCAAACTTCAAGCTTCTCAAGGAGAAGTATGGCTACG ATCACGAAGCGGTTGATCACTCTGCGAAGGAGTACGTTCGCGGTGACGTACACACTAACTCAATCGAGTCGTTCTGGTCT CAGGTGAAGCGTGGGATCAACGGGACCTATGTTTGGGTTTCGAAAAAGCACTTGCAGCTTTACCTTCGCGAGTTCGAGTA TCGCCATAACTTGCGGAAGCAACCCGGCCTGATGTTCGAGCTTCTTTTGCAGGCGTTCCCGAAGGTACGGGTTGAGTGA
Upstream 100 bases:
>100_bases CTTGCCGAGTTAGGGCTTAGGCCAGCCCGGATATATACCCTATGGACATGTAGAACATACCGTGATATAGAATGGGCATT CTCCTAGGAGGGAGAGTGCA
Downstream 100 bases:
>100_bases CCATAGCCTGCAAAAGCTGATCGAAGCGCTTTCTCACCTTACTGTCTGAAGACATGGCGGTCCTCTTGCAAAAAGGAATA AATGTTTCCTGTCGCGGCCT
Product: ISSpo3, transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MAQKPSKIREFQKRFPDEEACLTHLMRTRFGERLTCFKCQKQATYYRVKNRRSFECEHCGYQVYPTAGTPFEKTRTSLRD WFYVMFLFCETRNGVAAKEVQRQLGVTYKTAWRMCHLIRLYMGYVDGDYPMGGPGKTVEADETFIGGKDKAGKDDKAIVM GMIERGGDVVTRVVHARTKAHILPHIVRFVKEGSRVHTDEASNFKLLKEKYGYDHEAVDHSAKEYVRGDVHTNSIESFWS QVKRGINGTYVWVSKKHLQLYLREFEYRHNLRKQPGLMFELLLQAFPKVRVE
Sequences:
>Translated_292_residues MAQKPSKIREFQKRFPDEEACLTHLMRTRFGERLTCFKCQKQATYYRVKNRRSFECEHCGYQVYPTAGTPFEKTRTSLRD WFYVMFLFCETRNGVAAKEVQRQLGVTYKTAWRMCHLIRLYMGYVDGDYPMGGPGKTVEADETFIGGKDKAGKDDKAIVM GMIERGGDVVTRVVHARTKAHILPHIVRFVKEGSRVHTDEASNFKLLKEKYGYDHEAVDHSAKEYVRGDVHTNSIESFWS QVKRGINGTYVWVSKKHLQLYLREFEYRHNLRKQPGLMFELLLQAFPKVRVE >Mature_291_residues AQKPSKIREFQKRFPDEEACLTHLMRTRFGERLTCFKCQKQATYYRVKNRRSFECEHCGYQVYPTAGTPFEKTRTSLRDW FYVMFLFCETRNGVAAKEVQRQLGVTYKTAWRMCHLIRLYMGYVDGDYPMGGPGKTVEADETFIGGKDKAGKDDKAIVMG MIERGGDVVTRVVHARTKAHILPHIVRFVKEGSRVHTDEASNFKLLKEKYGYDHEAVDHSAKEYVRGDVHTNSIESFWSQ VKRGINGTYVWVSKKHLQLYLREFEYRHNLRKQPGLMFELLLQAFPKVRVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003220 [H]
Pfam domain/function: PF03811 Ins_element1 [H]
EC number: NA
Molecular weight: Translated: 34159; Mature: 34028
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKPSKIREFQKRFPDEEACLTHLMRTRFGERLTCFKCQKQATYYRVKNRRSFECEHCG CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHCC YQVYPTAGTPFEKTRTSLRDWFYVMFLFCETRNGVAAKEVQRQLGVTYKTAWRMCHLIRL EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH YMGYVDGDYPMGGPGKTVEADETFIGGKDKAGKDDKAIVMGMIERGGDVVTRVVHARTKA HHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH HILPHIVRFVKEGSRVHTDEASNFKLLKEKYGYDHEAVDHSAKEYVRGDVHTNSIESFWS HHHHHHHHHHHCCCEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH QVKRGINGTYVWVSKKHLQLYLREFEYRHNLRKQPGLMFELLLQAFPKVRVE HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure AQKPSKIREFQKRFPDEEACLTHLMRTRFGERLTCFKCQKQATYYRVKNRRSFECEHCG CCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHCC YQVYPTAGTPFEKTRTSLRDWFYVMFLFCETRNGVAAKEVQRQLGVTYKTAWRMCHLIRL EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH YMGYVDGDYPMGGPGKTVEADETFIGGKDKAGKDDKAIVMGMIERGGDVVTRVVHARTKA HHHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHH HILPHIVRFVKEGSRVHTDEASNFKLLKEKYGYDHEAVDHSAKEYVRGDVHTNSIESFWS HHHHHHHHHHHCCCEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH QVKRGINGTYVWVSKKHLQLYLREFEYRHNLRKQPGLMFELLLQAFPKVRVE HHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6306577; 9847077; 11016950 [H]