| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is nadE [H]
Identifier: 75675418
GI number: 75675418
Start: 1347381
End: 1349132
Strand: Direct
Name: nadE [H]
Synonym: Nwi_1225
Alternate gene names: 75675418
Gene position: 1347381-1349132 (Clockwise)
Preceding gene: 75675417
Following gene: 75675421
Centisome position: 39.6
GC content: 65.18
Gene sequence:
>1752_bases ATGACCGAAACAACCTTCAAGATCACGCTCGGCCAACTAAACCCGACGGTCGGAGACATCGTCGGCAATGCGGCCAAGGC CCGCGCCGCGCGCGCTCAGGCGAAGGCCGACGGCGCCGCGCTGGTGGCTCTTCCCGAACTGTTCATCGCCGGCTATCCGC CCGAGGATCTGGTTCTGAGGCCGGCATTTCAGGCTGCCTGCCGCGAGGCGATCGAAGCTCTCGCGCGAGAGACCAGTGAC GGCGGCCCGGCCATGCTGATCGGCACTCCATGGGTCGATGACGGCAAGCTCTACAATGCCTATGCGTTGCTGGACGAGGG GCGGGTCGCGGCGCTTCGTTTCAAAGTCAATCTGCCGAACTACGGCGTGTTCGACGAAAAGCGCGTGTTCGCGCGGGGAC CGGTCGGAGGCCCGTTGAAGATTCGGGGCGTGCGGATCGGCGTGCCGATCTGTGAAGATACCTGGGTTGAGGAATCCGCC GAGTACGAGAACGTCGTCGAATGCCTCGCTGAAACCGGCGCGGAAATTCTCGTCGTTCCCAATGGGTCGCCCTACGCAAA GGGCAAGAGCGATATCAGGCTGTCGATCTCGGTCGCGCGCGTGACCGAGAGCGATCTGCCGCTGGTCTATCTCAATCAGG TCGGCGGCCAGGATGAACTGGTGTTCGACGGCGCTTCTTTCGTGCTGAACGCCGATCGCTCGCTGGCGGCGCAGCTTCCC TTTTTCGAGGAAAGCGTCTTCACGCTGCAATGGACCAGGTCTGCCGAGGGGTGGCGCTGCGCCGGACCGGTCGCGCCGCA GATCGACGGCGACAAGGCCGACTATGCCGCCTGCGTGCTGGGGTTGCGCGACTATGTCCGGAAGAACGGGTTTCCCGGCG TTCTGCTCGGCGTGTCCGGCGGAATCGACTCGGCCTTGTGCGCGGCCATCGCCGTCGACGCTCTCGGGGCCGAGCAGGTT CGCGGCGTCATGCTGCCGTTCCGTTTTACGGCGCAGGTCTCGCTCGACGATGCGGCAAGGCTCGCGACGGCGCTCGGCAT TCGCTACGACGTGCTGCCGATCGCGCAGGCGGTGAATGGCTTCGAGGAGATTCTCTCCGGCGTGTTCGCGGGCGCGCCTC GCGATATTACCGAGGAGAACCTGCAATCCCGCGCTCGCGGCACGCTTCTGATGGCGATGTCCAACAAGCTCGGTGCGATG GTGGTGACCACCGGCAACAAATCGGAAATGTCGGTGGGGTACGCCACGCTGTACGGCGACATGAACGGCGGCTTCAATCC GATCAAGGATATCTACAAGACCGAGGTGCTCCGGATGGCTAGCCTGCGCAACGCGTGGAAACCGGACGGCGCGCTTGGTC CATCGGGCGAGGTGATCCCGCCCGGCGCCATCTCGCGGCCGCCGACGGCCGAGTTGCGCGAAGGCCAGCTGGATCAGGAT TCGCTGCCGCCCTACGATCTGCTCGACGCGATTCTCGAGCGGTTGGTCGAGCGGGAGGAACCGCTCGCGGCGATCGTCGC GGAAGGGTTCGACCACGACGTGGTCGTGCGCGTCGATCGCCTGCTGAATGCCGCCGAGTACAAGCGCCGGCAGGCGGCGC CGGGCGTCAAGGTCACGCGCCGGAATTTCGGCCGCGACCGTCGCTATCCGATCACCAACCGGTTTCGCGATTCCGGCGAA TCATTGCCGGCGCCGGATGAGACCCTCGTCTCCCGCGGCAGCCGGAGTTCCGCCGAAGCCTTTCAGGAATGA
Upstream 100 bases:
>100_bases GACGGGCATGTTTTCTTGATCCGCCGCTGTCCATGCCGCTCGAACCCGCTATAACTCCGCCATATTGCAGCAAGGCGAGG CCGGCGGGTAACAAGCATCC
Downstream 100 bases:
>100_bases TGCGAGGAATGACCGGCGAATCGGAGGCCTTCCGCTTCTGATGTAAACACAACCGGAAAACTGCTGCTCGCCCTACTGCG CGGGTATGAACGTGGGTCCC
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MTETTFKITLGQLNPTVGDIVGNAAKARAARAQAKADGAALVALPELFIAGYPPEDLVLRPAFQAACREAIEALARETSD GGPAMLIGTPWVDDGKLYNAYALLDEGRVAALRFKVNLPNYGVFDEKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESA EYENVVECLAETGAEILVVPNGSPYAKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLP FFEESVFTLQWTRSAEGWRCAGPVAPQIDGDKADYAACVLGLRDYVRKNGFPGVLLGVSGGIDSALCAAIAVDALGAEQV RGVMLPFRFTAQVSLDDAARLATALGIRYDVLPIAQAVNGFEEILSGVFAGAPRDITEENLQSRARGTLLMAMSNKLGAM VVTTGNKSEMSVGYATLYGDMNGGFNPIKDIYKTEVLRMASLRNAWKPDGALGPSGEVIPPGAISRPPTAELREGQLDQD SLPPYDLLDAILERLVEREEPLAAIVAEGFDHDVVVRVDRLLNAAEYKRRQAAPGVKVTRRNFGRDRRYPITNRFRDSGE SLPAPDETLVSRGSRSSAEAFQE
Sequences:
>Translated_583_residues MTETTFKITLGQLNPTVGDIVGNAAKARAARAQAKADGAALVALPELFIAGYPPEDLVLRPAFQAACREAIEALARETSD GGPAMLIGTPWVDDGKLYNAYALLDEGRVAALRFKVNLPNYGVFDEKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESA EYENVVECLAETGAEILVVPNGSPYAKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLP FFEESVFTLQWTRSAEGWRCAGPVAPQIDGDKADYAACVLGLRDYVRKNGFPGVLLGVSGGIDSALCAAIAVDALGAEQV RGVMLPFRFTAQVSLDDAARLATALGIRYDVLPIAQAVNGFEEILSGVFAGAPRDITEENLQSRARGTLLMAMSNKLGAM VVTTGNKSEMSVGYATLYGDMNGGFNPIKDIYKTEVLRMASLRNAWKPDGALGPSGEVIPPGAISRPPTAELREGQLDQD SLPPYDLLDAILERLVEREEPLAAIVAEGFDHDVVVRVDRLLNAAEYKRRQAAPGVKVTRRNFGRDRRYPITNRFRDSGE SLPAPDETLVSRGSRSSAEAFQE >Mature_582_residues TETTFKITLGQLNPTVGDIVGNAAKARAARAQAKADGAALVALPELFIAGYPPEDLVLRPAFQAACREAIEALARETSDG GPAMLIGTPWVDDGKLYNAYALLDEGRVAALRFKVNLPNYGVFDEKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESAE YENVVECLAETGAEILVVPNGSPYAKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLPF FEESVFTLQWTRSAEGWRCAGPVAPQIDGDKADYAACVLGLRDYVRKNGFPGVLLGVSGGIDSALCAAIAVDALGAEQVR GVMLPFRFTAQVSLDDAARLATALGIRYDVLPIAQAVNGFEEILSGVFAGAPRDITEENLQSRARGTLLMAMSNKLGAMV VTTGNKSEMSVGYATLYGDMNGGFNPIKDIYKTEVLRMASLRNAWKPDGALGPSGEVIPPGAISRPPTAELREGQLDQDS LPPYDLLDAILERLVEREEPLAAIVAEGFDHDVVVRVDRLLNAAEYKRRQAAPGVKVTRRNFGRDRRYPITNRFRDSGES LPAPDETLVSRGSRSSAEAFQE
Specific function: It is not known if this NAD synthase uses NH(3) or glutamine as the N donor [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 62692; Mature: 62561
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETTFKITLGQLNPTVGDIVGNAAKARAARAQAKADGAALVALPELFIAGYPPEDLVLR CCCEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCHHCEEC PAFQAACREAIEALARETSDGGPAMLIGTPWVDDGKLYNAYALLDEGRVAALRFKVNLPN HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEECCC YGVFDEKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESAEYENVVECLAETGAEILVVP CCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE NGSPYAKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLP CCCCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCEEEECCCEEEEECCCHHHHCCC FFEESVFTLQWTRSAEGWRCAGPVAPQIDGDKADYAACVLGLRDYVRKNGFPGVLLGVSG CCCCCEEEEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC GIDSALCAAIAVDALGAEQVRGVMLPFRFTAQVSLDDAARLATALGIRYDVLPIAQAVNG CCHHHHHHHHHHHHCCHHHHCCEEECEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHH FEEILSGVFAGAPRDITEENLQSRARGTLLMAMSNKLGAMVVTTGNKSEMSVGYATLYGD HHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEEEC MNGGFNPIKDIYKTEVLRMASLRNAWKPDGALGPSGEVIPPGAISRPPTAELREGQLDQD CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC SLPPYDLLDAILERLVEREEPLAAIVAEGFDHDVVVRVDRLLNAAEYKRRQAAPGVKVTR CCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHH RNFGRDRRYPITNRFRDSGESLPAPDETLVSRGSRSSAEAFQE HHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHCC >Mature Secondary Structure TETTFKITLGQLNPTVGDIVGNAAKARAARAQAKADGAALVALPELFIAGYPPEDLVLR CCEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCHHCEEC PAFQAACREAIEALARETSDGGPAMLIGTPWVDDGKLYNAYALLDEGRVAALRFKVNLPN HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEEEEEEEECCC YGVFDEKRVFARGPVGGPLKIRGVRIGVPICEDTWVEESAEYENVVECLAETGAEILVVP CCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEE NGSPYAKGKSDIRLSISVARVTESDLPLVYLNQVGGQDELVFDGASFVLNADRSLAAQLP CCCCCCCCCCCEEEEEEEEEECCCCCCEEEEECCCCCCEEEECCCEEEEECCCHHHHCCC FFEESVFTLQWTRSAEGWRCAGPVAPQIDGDKADYAACVLGLRDYVRKNGFPGVLLGVSG CCCCCEEEEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC GIDSALCAAIAVDALGAEQVRGVMLPFRFTAQVSLDDAARLATALGIRYDVLPIAQAVNG CCHHHHHHHHHHHHCCHHHHCCEEECEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHH FEEILSGVFAGAPRDITEENLQSRARGTLLMAMSNKLGAMVVTTGNKSEMSVGYATLYGD HHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECCCCCEEEEECCCCCCCEEEEEEEEEC MNGGFNPIKDIYKTEVLRMASLRNAWKPDGALGPSGEVIPPGAISRPPTAELREGQLDQD CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC SLPPYDLLDAILERLVEREEPLAAIVAEGFDHDVVVRVDRLLNAAEYKRRQAAPGVKVTR CCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHH RNFGRDRRYPITNRFRDSGESLPAPDETLVSRGSRSSAEAFQE HHCCCCCCCCCHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8431308; 8195100 [H]