| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675383
Identifier: 75675383
GI number: 75675383
Start: 1295501
End: 1296892
Strand: Direct
Name: 75675383
Synonym: Nwi_1190
Alternate gene names: NA
Gene position: 1295501-1296892 (Clockwise)
Preceding gene: 75675382
Following gene: 75675384
Centisome position: 38.08
GC content: 65.09
Gene sequence:
>1392_bases ATGGACCAGACCTCGATCGAACGGCTGAAGGACTACCTTGCGCAGCTTCCGCCGAAATCGCAGGCGTTGTTGATGCGGGA GTTCGAGCGCGCGGTGGAGCGCGGCGAAGACGCTGCGGTCGCGAACCTCGTTCTCGGGGAGCTGCGCCGGATTGACCCCC AATCGGGTGACAGCGAGCAGCGGAGTGAAGACCCGGTCCGGCATCTGTTCCGTCCCCTCGATCCGTTTCTCGTGGAAGAC AATGTCGTGCCGCGCTCCGGCCAGATCCGGCGCAACTCGCTCGTGCCGGTCTGGCGTTGGCTGGCGCGCGAGGGCGCGCC GGATGACGCGCGCGCGTTCGAGGCCGTGCTGGCGGCTGAGGCCGGATCGGCATCCGGGATCGAGACGGCGGCACGGGTTT TCCAGCCGGTGGCGGCAGCCGCCATCCTGCGAATCCTTACGGATAGTTCCGGCATCAACCGCCAGCGGACGCTTGGCCGC ATCAGCGCTCCCGGCGTCATTGAAGATCTGCCCGCGATCGCGGCGGTTCTGCACGCGCGCGAAGCCCTCGACACCCTGAA TATTCGGCTGCCTGGTTTTCTGCCTGTCTTCGGCGAGCCGCAGATCGCCTCCCTGATGACGGCGCTCAATGTTCCTTCCC TGCAAACGCCGGCGGCCTTGCCGTTTGCGTTGTCGCTGGTGATGCAGCGCCTGTCGGCACCGTGGCAGATCATCCGCCTC GCGGTTCAGGTCGCGGGGTCGGACGATGAGATACGCGTGGCGGCGACGCCTTATGGCGTGGCCGTCAAGATGGCGCTCGA CGATCTGTCGCAGACGTCGGCCGTTCTGCGGGCCGATATCCGGCGCGGCCGGTTCGAGAATGTCTCCCGGCACTTGAAGA CCTTGCACGACGGTGTTCGCGGGCTAAGGACCGAGCTTGATATCCGAACCGATTCCGGCTGGGGGCGTCAGCTCGCGGCG ATCAGGGTCGATATTTCCGAGGTTCTGCAATCGGAGATCGAAGGCGTCGCCGGCCGTGTGCGGCGTATTTTGCGTCAGCG GCCCGACAAGGACATTCCAGCCGGCGCAAAACTCGACTCGATCGAGGTCGAGGAAACCGCCGCGTTGATCGATTTTGTCG CGGTATGCCGGACCTACGCCAGCGAACTGGCCATCAACGAAGTCACGACGCGCACCTATTCGGACTTGCAGCATTACGTC GAGAGGACCTCCGAAACCCTTGTCGAAGCGCTTCGCAACGGCGATGAGCGCGTGCGGGCGTTCCGGCAGCAGCAGGTCAA GGCGGTGATCCGTTTTTGCGAGGTTCTGTTCGGCCGGGATTACTCGTCGCTGATGAGCCGGGCGGCGGACCACGCGCTCA CGGCCGAACGCAAATCGTCGCGGGCAGGGTGA
Upstream 100 bases:
>100_bases TCCTCCGGCCCGGCGCAACGCATCCTTAAGACCGCGTCTGATATGAGGCGCTACGGGCTTTCCGGTGTCCGCGCGATCGT TCGCGTGAAGATGTGCGTGC
Downstream 100 bases:
>100_bases GCGGGCGTCCGTGTTTCCGATAAACGCTATTAAATCATGCGGTTGTGGATGTTTACCGTCAATTGTGCCGCAATTGTCAA TTGCGTCCGTATTCCAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MDQTSIERLKDYLAQLPPKSQALLMREFERAVERGEDAAVANLVLGELRRIDPQSGDSEQRSEDPVRHLFRPLDPFLVED NVVPRSGQIRRNSLVPVWRWLAREGAPDDARAFEAVLAAEAGSASGIETAARVFQPVAAAAILRILTDSSGINRQRTLGR ISAPGVIEDLPAIAAVLHAREALDTLNIRLPGFLPVFGEPQIASLMTALNVPSLQTPAALPFALSLVMQRLSAPWQIIRL AVQVAGSDDEIRVAATPYGVAVKMALDDLSQTSAVLRADIRRGRFENVSRHLKTLHDGVRGLRTELDIRTDSGWGRQLAA IRVDISEVLQSEIEGVAGRVRRILRQRPDKDIPAGAKLDSIEVEETAALIDFVAVCRTYASELAINEVTTRTYSDLQHYV ERTSETLVEALRNGDERVRAFRQQQVKAVIRFCEVLFGRDYSSLMSRAADHALTAERKSSRAG
Sequences:
>Translated_463_residues MDQTSIERLKDYLAQLPPKSQALLMREFERAVERGEDAAVANLVLGELRRIDPQSGDSEQRSEDPVRHLFRPLDPFLVED NVVPRSGQIRRNSLVPVWRWLAREGAPDDARAFEAVLAAEAGSASGIETAARVFQPVAAAAILRILTDSSGINRQRTLGR ISAPGVIEDLPAIAAVLHAREALDTLNIRLPGFLPVFGEPQIASLMTALNVPSLQTPAALPFALSLVMQRLSAPWQIIRL AVQVAGSDDEIRVAATPYGVAVKMALDDLSQTSAVLRADIRRGRFENVSRHLKTLHDGVRGLRTELDIRTDSGWGRQLAA IRVDISEVLQSEIEGVAGRVRRILRQRPDKDIPAGAKLDSIEVEETAALIDFVAVCRTYASELAINEVTTRTYSDLQHYV ERTSETLVEALRNGDERVRAFRQQQVKAVIRFCEVLFGRDYSSLMSRAADHALTAERKSSRAG >Mature_463_residues MDQTSIERLKDYLAQLPPKSQALLMREFERAVERGEDAAVANLVLGELRRIDPQSGDSEQRSEDPVRHLFRPLDPFLVED NVVPRSGQIRRNSLVPVWRWLAREGAPDDARAFEAVLAAEAGSASGIETAARVFQPVAAAAILRILTDSSGINRQRTLGR ISAPGVIEDLPAIAAVLHAREALDTLNIRLPGFLPVFGEPQIASLMTALNVPSLQTPAALPFALSLVMQRLSAPWQIIRL AVQVAGSDDEIRVAATPYGVAVKMALDDLSQTSAVLRADIRRGRFENVSRHLKTLHDGVRGLRTELDIRTDSGWGRQLAA IRVDISEVLQSEIEGVAGRVRRILRQRPDKDIPAGAKLDSIEVEETAALIDFVAVCRTYASELAINEVTTRTYSDLQHYV ERTSETLVEALRNGDERVRAFRQQQVKAVIRFCEVLFGRDYSSLMSRAADHALTAERKSSRAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51082; Mature: 51082
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQTSIERLKDYLAQLPPKSQALLMREFERAVERGEDAAVANLVLGELRRIDPQSGDSEQ CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHH RSEDPVRHLFRPLDPFLVEDNVVPRSGQIRRNSLVPVWRWLAREGAPDDARAFEAVLAAE HCCCHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHC AGSASGIETAARVFQPVAAAAILRILTDSSGINRQRTLGRISAPGVIEDLPAIAAVLHAR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHH EALDTLNIRLPGFLPVFGEPQIASLMTALNVPSLQTPAALPFALSLVMQRLSAPWQIIRL HHHHHHCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH AVQVAGSDDEIRVAATPYGVAVKMALDDLSQTSAVLRADIRRGRFENVSRHLKTLHDGVR HHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH GLRTELDIRTDSGWGRQLAAIRVDISEVLQSEIEGVAGRVRRILRQRPDKDIPAGAKLDS HHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC IEVEETAALIDFVAVCRTYASELAINEVTTRTYSDLQHYVERTSETLVEALRNGDERVRA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FRQQQVKAVIRFCEVLFGRDYSSLMSRAADHALTAERKSSRAG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDQTSIERLKDYLAQLPPKSQALLMREFERAVERGEDAAVANLVLGELRRIDPQSGDSEQ CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHH RSEDPVRHLFRPLDPFLVEDNVVPRSGQIRRNSLVPVWRWLAREGAPDDARAFEAVLAAE HCCCHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHC AGSASGIETAARVFQPVAAAAILRILTDSSGINRQRTLGRISAPGVIEDLPAIAAVLHAR CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHH EALDTLNIRLPGFLPVFGEPQIASLMTALNVPSLQTPAALPFALSLVMQRLSAPWQIIRL HHHHHHCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH AVQVAGSDDEIRVAATPYGVAVKMALDDLSQTSAVLRADIRRGRFENVSRHLKTLHDGVR HHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH GLRTELDIRTDSGWGRQLAAIRVDISEVLQSEIEGVAGRVRRILRQRPDKDIPAGAKLDS HHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC IEVEETAALIDFVAVCRTYASELAINEVTTRTYSDLQHYVERTSETLVEALRNGDERVRA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH FRQQQVKAVIRFCEVLFGRDYSSLMSRAADHALTAERKSSRAG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA