| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675375
Identifier: 75675375
GI number: 75675375
Start: 1288837
End: 1290759
Strand: Direct
Name: 75675375
Synonym: Nwi_1182
Alternate gene names: NA
Gene position: 1288837-1290759 (Clockwise)
Preceding gene: 75675374
Following gene: 75675376
Centisome position: 37.88
GC content: 64.9
Gene sequence:
>1923_bases ATGACAGACACACCTAATCTCGGGTTGCCGTATATCGACGGCAGCCAGGCCCAGAAGCACGTCACTCACAATGAGGCGCT GCGCATACTCGACGCGGCGATCCAGATCGGCGTGCTCGATCGGACGCTCACCACGCCGCCGTCGAGCCCGGCGGCGGGTG AACGGTACGTCGTCGCAGGCGGTGCGACCGGCGATTGGGCCGGGAAGGATGATGCGATCGCGACCTGGCAGGACGACGCC TGGGCGTTCCTTACGCCGAAGGCGGGATGGTGCATCTGGTCGGCGGCGGATGAGAGCCTGTTCGTGTTCGACGGCTCCGC GTGGCAGGGCGCGGGTGGCGCTGCTTCGCTCGACAGCGTTGCGCAGCTCGGCGTCAACGCCGCCGCCAGCACGCCTAATC TGCTGACGGTCAAATCCAACGCCGCGCTGTTTGCAGCCATCGACGCCGTCGATGGCGGCACCGGCGACGTGCGGCTTCAG GTCTCGAAGGAGGGTTCGGCCAACACGGCGTCAGTATTTTTCTCGAACGGCTTTTCAGGACGGGCCGAGTTCGGTCTTGT CGGGGCGGACGCCTTCAAGCTCAAGGTGTCGGCGGACGGCTCAGGCTGGATCGAGGCTCTCGATATCGATCAGGATACCG GCAATGTGGCGCTGCCGCGCGGACTGGCGCTGACGGGCGTTGTTGCTCCCGCGCAGATCACGGCCGATCAGGACGACTAC GCCCCGGCGGGACTTGCGGCCGCTTCGGTGCTGCAAATCAGCACGGACGCCCCGCGCGGCCTTTCGGGCCTGGCTGGCGG AACCGAAGGGCGTTGTCTCATCATCATCAACGTGGGCGGCCAGCCGGTCACGCTGCTGAATGAAAGCGCCTTGTCGTCGG CGTCAAATCGTTTTTCCCTCAACGACAGCCTTGTGATCTCGGCGAAACAGGCCGCAATTCTGCGTTATGACGGCACCGCG GCGCGCTGGCAGGCGATCGCTGGCGGGGTGGCCGGAGCGGGGGCTTCAGGGGGCGGATTCATCTCCCCGCCGCAAGGACG CCTGACGCTTGCGAGCGGCGTGCCGGTGATGACGACGACGCAGAGCGCGAAGAGCACGCTCTATTACACGCCGTACCAGG GTAACCAGATTCCGATCTACAACGGCACTGAGATGGTGCCCATGGCATTCGCCGAACTGTCCGTCGCGACCACGGACACG ACGAAGAATCCGGCAGCGATCGGCGCCGGCAAGGTCAACGACTGGTTCGTCTGGAACGACGGCGGCACGTTGCGGCTTTC GCATGGTCCCGACTGGACCAGCGACACAACGCGCAGCGCGGGCACCGCGTTGACGAGGGTCAATGGCATTCTTCTCAACG CGGTGGCCATCACCAACGGTCCGGCGGCTTCACGCGGCACTTACGTCGGCACGACGCGGAGCAATGGTTCCTCGCTCCTC GACTGGATTTCGGGAAGCACCGCATCCGGCGGCGGCATGGCCTCCTTGAATGTCTGGAACGCCTTCAACCGCGCCGATGT CACGACGACAGTCTCCGACAGCACGGGGTCATGGAGCTACAGCAGCTCGGCCGTCCGCCCATCCGGGAACAGCACGTCGA ACCGAATTCAGTTCGTCAGCGGCCTGGCCGAGGAGGGGATTTCCATGATGCTCTCGCAACGCATAGCGACCGCGACAGCA GCCGGCGCGCTGGGAAGGATCGGAATAGGGCTGGATTCGACATCGGCCTATTCGTTCCATGCGCTCGGCGTGTCTCCGGC TAGTGGAGTGGTGTTCAACGCCGCGCTCACAGTGCAGGGAGCGACACCTCCGCAGTTGGGCGCTCATTATCTTCAGGCGC TTGAGAGCGGCGACGGGACGAACGCCACGACGTTCGTCGGCGGTGGTGAGCCCTATCAGTTCAGCGCGCGATTGCGGATG TAG
Upstream 100 bases:
>100_bases CGGTGCGCCTCAGGCAAGCCTGCATCTTCGCGTCGCGCAAATCTCGGCGACCGTCGGCGCGGGTCACCCCACTGAGCTTA CTCTCACCCTCTGAGTTGCC
Downstream 100 bases:
>100_bases GCGCGGCTTGCGAACAGGTCGCGCTGGACCGGGCATCCGCCCTCTTGATCGTTCGCGCCGGCGAACCTCGTCGACGCGCC GCAGGCAGTCGCGTCTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 640; Mature: 639
Protein sequence:
>640_residues MTDTPNLGLPYIDGSQAQKHVTHNEALRILDAAIQIGVLDRTLTTPPSSPAAGERYVVAGGATGDWAGKDDAIATWQDDA WAFLTPKAGWCIWSAADESLFVFDGSAWQGAGGAASLDSVAQLGVNAAASTPNLLTVKSNAALFAAIDAVDGGTGDVRLQ VSKEGSANTASVFFSNGFSGRAEFGLVGADAFKLKVSADGSGWIEALDIDQDTGNVALPRGLALTGVVAPAQITADQDDY APAGLAAASVLQISTDAPRGLSGLAGGTEGRCLIIINVGGQPVTLLNESALSSASNRFSLNDSLVISAKQAAILRYDGTA ARWQAIAGGVAGAGASGGGFISPPQGRLTLASGVPVMTTTQSAKSTLYYTPYQGNQIPIYNGTEMVPMAFAELSVATTDT TKNPAAIGAGKVNDWFVWNDGGTLRLSHGPDWTSDTTRSAGTALTRVNGILLNAVAITNGPAASRGTYVGTTRSNGSSLL DWISGSTASGGGMASLNVWNAFNRADVTTTVSDSTGSWSYSSSAVRPSGNSTSNRIQFVSGLAEEGISMMLSQRIATATA AGALGRIGIGLDSTSAYSFHALGVSPASGVVFNAALTVQGATPPQLGAHYLQALESGDGTNATTFVGGGEPYQFSARLRM
Sequences:
>Translated_640_residues MTDTPNLGLPYIDGSQAQKHVTHNEALRILDAAIQIGVLDRTLTTPPSSPAAGERYVVAGGATGDWAGKDDAIATWQDDA WAFLTPKAGWCIWSAADESLFVFDGSAWQGAGGAASLDSVAQLGVNAAASTPNLLTVKSNAALFAAIDAVDGGTGDVRLQ VSKEGSANTASVFFSNGFSGRAEFGLVGADAFKLKVSADGSGWIEALDIDQDTGNVALPRGLALTGVVAPAQITADQDDY APAGLAAASVLQISTDAPRGLSGLAGGTEGRCLIIINVGGQPVTLLNESALSSASNRFSLNDSLVISAKQAAILRYDGTA ARWQAIAGGVAGAGASGGGFISPPQGRLTLASGVPVMTTTQSAKSTLYYTPYQGNQIPIYNGTEMVPMAFAELSVATTDT TKNPAAIGAGKVNDWFVWNDGGTLRLSHGPDWTSDTTRSAGTALTRVNGILLNAVAITNGPAASRGTYVGTTRSNGSSLL DWISGSTASGGGMASLNVWNAFNRADVTTTVSDSTGSWSYSSSAVRPSGNSTSNRIQFVSGLAEEGISMMLSQRIATATA AGALGRIGIGLDSTSAYSFHALGVSPASGVVFNAALTVQGATPPQLGAHYLQALESGDGTNATTFVGGGEPYQFSARLRM >Mature_639_residues TDTPNLGLPYIDGSQAQKHVTHNEALRILDAAIQIGVLDRTLTTPPSSPAAGERYVVAGGATGDWAGKDDAIATWQDDAW AFLTPKAGWCIWSAADESLFVFDGSAWQGAGGAASLDSVAQLGVNAAASTPNLLTVKSNAALFAAIDAVDGGTGDVRLQV SKEGSANTASVFFSNGFSGRAEFGLVGADAFKLKVSADGSGWIEALDIDQDTGNVALPRGLALTGVVAPAQITADQDDYA PAGLAAASVLQISTDAPRGLSGLAGGTEGRCLIIINVGGQPVTLLNESALSSASNRFSLNDSLVISAKQAAILRYDGTAA RWQAIAGGVAGAGASGGGFISPPQGRLTLASGVPVMTTTQSAKSTLYYTPYQGNQIPIYNGTEMVPMAFAELSVATTDTT KNPAAIGAGKVNDWFVWNDGGTLRLSHGPDWTSDTTRSAGTALTRVNGILLNAVAITNGPAASRGTYVGTTRSNGSSLLD WISGSTASGGGMASLNVWNAFNRADVTTTVSDSTGSWSYSSSAVRPSGNSTSNRIQFVSGLAEEGISMMLSQRIATATAA GALGRIGIGLDSTSAYSFHALGVSPASGVVFNAALTVQGATPPQLGAHYLQALESGDGTNATTFVGGGEPYQFSARLRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65126; Mature: 64994
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTPNLGLPYIDGSQAQKHVTHNEALRILDAAIQIGVLDRTLTTPPSSPAAGERYVVAG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCEECCCCCCCCCCCEEEEEC GATGDWAGKDDAIATWQDDAWAFLTPKAGWCIWSAADESLFVFDGSAWQGAGGAASLDSV CCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHH AQLGVNAAASTPNLLTVKSNAALFAAIDAVDGGTGDVRLQVSKEGSANTASVFFSNGFSG HHHCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCC RAEFGLVGADAFKLKVSADGSGWIEALDIDQDTGNVALPRGLALTGVVAPAQITADQDDY CCEEEEEECCEEEEEEECCCCCCEEEEECCCCCCCEECCCCEEEEEEECCEEEECCCCCC APAGLAAASVLQISTDAPRGLSGLAGGTEGRCLIIINVGGQPVTLLNESALSSASNRFSL CCCCHHHEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHCCCCEEEC NDSLVISAKQAAILRYDGTAARWQAIAGGVAGAGASGGGFISPPQGRLTLASGVPVMTTT CCCEEEEECCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEC QSAKSTLYYTPYQGNQIPIYNGTEMVPMAFAELSVATTDTTKNPAAIGAGKVNDWFVWND CCCCCEEEECCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCEECCCCCCEEEEECC GGTLRLSHGPDWTSDTTRSAGTALTRVNGILLNAVAITNGPAASRGTYVGTTRSNGSSLL CCEEEECCCCCCCCCCCCCCCCHHEEECCEEEEEEEEECCCCCCCCCEEEEECCCCCHHH DWISGSTASGGGMASLNVWNAFNRADVTTTVSDSTGSWSYSSSAVRPSGNSTSNRIQFVS HHHCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH GLAEEGISMMLSQRIATATAAGALGRIGIGLDSTSAYSFHALGVSPASGVVFNAALTVQG HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEEC ATPPQLGAHYLQALESGDGTNATTFVGGGEPYQFSARLRM CCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECC >Mature Secondary Structure TDTPNLGLPYIDGSQAQKHVTHNEALRILDAAIQIGVLDRTLTTPPSSPAAGERYVVAG CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCEECCCCCCCCCCCEEEEEC GATGDWAGKDDAIATWQDDAWAFLTPKAGWCIWSAADESLFVFDGSAWQGAGGAASLDSV CCCCCCCCCCCCEEEECCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHH AQLGVNAAASTPNLLTVKSNAALFAAIDAVDGGTGDVRLQVSKEGSANTASVFFSNGFSG HHHCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCC RAEFGLVGADAFKLKVSADGSGWIEALDIDQDTGNVALPRGLALTGVVAPAQITADQDDY CCEEEEEECCEEEEEEECCCCCCEEEEECCCCCCCEECCCCEEEEEEECCEEEECCCCCC APAGLAAASVLQISTDAPRGLSGLAGGTEGRCLIIINVGGQPVTLLNESALSSASNRFSL CCCCHHHEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHCCCCEEEC NDSLVISAKQAAILRYDGTAARWQAIAGGVAGAGASGGGFISPPQGRLTLASGVPVMTTT CCCEEEEECCEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEC QSAKSTLYYTPYQGNQIPIYNGTEMVPMAFAELSVATTDTTKNPAAIGAGKVNDWFVWND CCCCCEEEECCCCCCEEEEECCCCCCEEEEEEEEEEECCCCCCCCEECCCCCCEEEEECC GGTLRLSHGPDWTSDTTRSAGTALTRVNGILLNAVAITNGPAASRGTYVGTTRSNGSSLL CCEEEECCCCCCCCCCCCCCCCHHEEECCEEEEEEEEECCCCCCCCCEEEEECCCCCHHH DWISGSTASGGGMASLNVWNAFNRADVTTTVSDSTGSWSYSSSAVRPSGNSTSNRIQFVS HHHCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH GLAEEGISMMLSQRIATATAAGALGRIGIGLDSTSAYSFHALGVSPASGVVFNAALTVQG HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEEEEEEC ATPPQLGAHYLQALESGDGTNATTFVGGGEPYQFSARLRM CCCHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA