| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675365
Identifier: 75675365
GI number: 75675365
Start: 1280428
End: 1280991
Strand: Direct
Name: 75675365
Synonym: Nwi_1172
Alternate gene names: NA
Gene position: 1280428-1280991 (Clockwise)
Preceding gene: 75675363
Following gene: 75675366
Centisome position: 37.64
GC content: 66.84
Gene sequence:
>564_bases ATGCCATCGATACTTCTGACCGGTCCCGCGGTCGAACCCTGGTCGGTCGAGGAGGCCAAGAGTTTCCTGCGGGCCGAGAA CGATGACGATGACGCGGTGATCGCGTCGCTGATCGCCGCCGCGCGAAGCCATGTCGAGGCGATGACGCGCTGCGCCCTGA TCGCGCAGACCTGGCGCTTCGTGCTGGACCAGTGGCCGAAAGACGGCCGCATCAGGCCGGGCCGGGGACCGTTGCGGACG CTCGCCGCGGCGCGCGTTTATAACTCGGCGGGGATCGCCACGCCGATCGATGCCGGGACGTTCGTTCTCGACAAGGCGGC GGGCGTGATCGCTTCATCCGTCTGGGTGTTTCCGGGGCGCGCCAGCGGGGGCATCGAACTCGATATCGAGATCGGATTCG GCGACGCCGCTTCCGATGTGCCTGACGTGTTGCGCCACGCGGTGCGGACGCTGGTCACGCACTGGTATGAAAACCGCGGT CTTGTCGCCATTGGCCAGAGCGTCGCGATGATGCCGGCCAGCGTCAGCGCCATGATCGCGAGCTATCGCGTGCACGCGCT CTGA
Upstream 100 bases:
>100_bases CCGCCTGTCAACGTCATGGCGCCGGCGTTTCCGACACTCTGCGGCGTATCGCGTCAGAGCGCGCCGCACCCTGTCAGGCG CAATAAAAAGAGGATATCCC
Downstream 100 bases:
>100_bases TCGCCTTCGCTCTCTCGGAAAAGGACATCACCATGACCAGCGCCAATGCAGCGCTCCGCGCCGCCGTTCACGATGCGCTT GCGGCCGACAGCGGCCTTCA
Product: phiE125 gp8 hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPSILLTGPAVEPWSVEEAKSFLRAENDDDDAVIASLIAAARSHVEAMTRCALIAQTWRFVLDQWPKDGRIRPGRGPLRT LAAARVYNSAGIATPIDAGTFVLDKAAGVIASSVWVFPGRASGGIELDIEIGFGDAASDVPDVLRHAVRTLVTHWYENRG LVAIGQSVAMMPASVSAMIASYRVHAL
Sequences:
>Translated_187_residues MPSILLTGPAVEPWSVEEAKSFLRAENDDDDAVIASLIAAARSHVEAMTRCALIAQTWRFVLDQWPKDGRIRPGRGPLRT LAAARVYNSAGIATPIDAGTFVLDKAAGVIASSVWVFPGRASGGIELDIEIGFGDAASDVPDVLRHAVRTLVTHWYENRG LVAIGQSVAMMPASVSAMIASYRVHAL >Mature_186_residues PSILLTGPAVEPWSVEEAKSFLRAENDDDDAVIASLIAAARSHVEAMTRCALIAQTWRFVLDQWPKDGRIRPGRGPLRTL AAARVYNSAGIATPIDAGTFVLDKAAGVIASSVWVFPGRASGGIELDIEIGFGDAASDVPDVLRHAVRTLVTHWYENRGL VAIGQSVAMMPASVSAMIASYRVHAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19964; Mature: 19833
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSILLTGPAVEPWSVEEAKSFLRAENDDDDAVIASLIAAARSHVEAMTRCALIAQTWRF CCCEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDQWPKDGRIRPGRGPLRTLAAARVYNSAGIATPIDAGTFVLDKAAGVIASSVWVFPGR HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCC ASGGIELDIEIGFGDAASDVPDVLRHAVRTLVTHWYENRGLVAIGQSVAMMPASVSAMIA CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH SYRVHAL HHHHHCC >Mature Secondary Structure PSILLTGPAVEPWSVEEAKSFLRAENDDDDAVIASLIAAARSHVEAMTRCALIAQTWRF CCEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLDQWPKDGRIRPGRGPLRTLAAARVYNSAGIATPIDAGTFVLDKAAGVIASSVWVFPGR HHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCC ASGGIELDIEIGFGDAASDVPDVLRHAVRTLVTHWYENRGLVAIGQSVAMMPASVSAMIA CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHH SYRVHAL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA