| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is yusP [H]
Identifier: 75675345
GI number: 75675345
Start: 1263841
End: 1265391
Strand: Direct
Name: yusP [H]
Synonym: Nwi_1152
Alternate gene names: 75675345
Gene position: 1263841-1265391 (Clockwise)
Preceding gene: 75675344
Following gene: 75675346
Centisome position: 37.15
GC content: 66.22
Gene sequence:
>1551_bases ATGAATACTTATGAGCGCCTGGGTCGGGGTCCGTCCGGTCCCCCGATTTCGTCCGGCGAAGGCGCGGCACGTCCCGGTTT CGCTGAAGGCGAGGGCGATGCGCCGCCGGTCGTCGTGTCGCCCGCCCAGCCGGGCCGGAGCGAGATCCGCACCATCCTGG TCAGCCTGATGCTGACCATGTTTCTCGCCGCCCTCGACCAGACCATCGTCGCAACCGCGCTGCCGACCATCGGCCGCCAG TTCCACGACGTCACCACGCTGGCGTGGATCATCACGGCGTATCTTCTGGCGTCGACAGCGGTCGCGCCGTTGTTCGGCAC GCTGAGCGATATTTACGGCCGCCGCGCCATGATCGTCACCGCGCTTGGCCTGTTCATCGCGGGTTCGGTCCTGTGTGCGC TGGCGCAGAACATGGCGACGCTGATCGTGGCGCGCGGCGTGCAGGGCATCGGCGGCGGCGGCATCCTGCCCTTGGTGCAG ACAATCATTTCCGATGTGGTGACGCCGCGGGAGCGCGGCCAGTACCAGGCTTATTTCAGCGGCGTGTGGACCGCGGCCGG CATCGCCGGGCCGGTGCTTGGCGGCGTATTCGCCGAGCACCTGCACTGGTCGATGATCTTCTGGATCAACGTGCCGCTCG GGCTCGTCTCGCTGGCGTTGCTGTTGCCGAAGATGGGCGGCATCCCGGCGTTTCACCGCCGCCGCAAAGTGGACTGGACC GGCGGCCTGCTGTTGATGACGTCGGCTGTGGTATTCATGCTGGTGCTGACATGGGGCGGCAACCGTTTCGCCTGGTTCTC GCGGGAAATCGTCGCCATGCTGGGAATCTCGCTGGTGCTTGCCGCCGTCTTCGTCTGGCACGCGCGCAAGGCGTCCGAAC CCTTCCTGCCGCTGTCGCTGATAGGCGGTTCGGTGGTTCCGTATGCGATAGCCGCGAGTGCTCTCGCGCTCAGTGCGATC ATCGGGATCACCGTGCATCTGCCGTTGTATTACCAGGCCGTCCATCATCTCGGCGTCAGCGAATCCGGACTGGCGCTGAT TCCGATCGCGGCGGTTTCGACCGGCGGCGCGATGCTTGCGGGCCGCGCCATGACGCATACCCTCCATTACAAACGGATCG CGATCGTCGGCACCGCGTTCGCGGCTGTGATGGCCGCGATCATGGCTGCGGTGACGATGCCGCTATGGCCGCTGCTGGCG ATGCTCTCGCTGTTCGCGTTTGGTCTCGGCACCATCTTTCCGGTCAGCGTGGTGTCGCTGCAGAATGCGGTGATGCGCGA GCAGGTCGGAACCGTCACCGGCGCGATGAACTTTTTTCGCGCGCTCGCCTGTTCCTTCGTCGTCGCCGCGTTCGCCGCCA TCCTGCTGATGACACTGGGAACCGACGCCATGATCGGCCATGAGGGAGGCGGCCGGCTCAGTGCGATCCAGGCGTCGGAC CTCACGAGGGCGTTCCGTTACGTGTTCGCCGCCACGGCCGCGATGATGGCCGCCGCCGCGTTGCTGCTGGTGCGAATGGA AGAGCGGCCGCTGGCCGGCCCTTCGGCCTGA
Upstream 100 bases:
>100_bases TTCTTTGCCCGTCGCTGTCGGAAGTCGCACCCCACCATTAAATAGCAAGTAGAAAACCGCGGCAGCCTCCGCGCCTTGAG CCAGATCATATTCCGTCCGC
Downstream 100 bases:
>100_bases TCCGCGCGGGGGAGGTTCGTCGCCGGGGACTTTCACAGCTTCACGGAAGCGCTGAAATCTCCAGCCTTTTGATCTGATGC GTTTTCTTCACGCGAACCAG
Product: major facilitator transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MNTYERLGRGPSGPPISSGEGAARPGFAEGEGDAPPVVVSPAQPGRSEIRTILVSLMLTMFLAALDQTIVATALPTIGRQ FHDVTTLAWIITAYLLASTAVAPLFGTLSDIYGRRAMIVTALGLFIAGSVLCALAQNMATLIVARGVQGIGGGGILPLVQ TIISDVVTPRERGQYQAYFSGVWTAAGIAGPVLGGVFAEHLHWSMIFWINVPLGLVSLALLLPKMGGIPAFHRRRKVDWT GGLLLMTSAVVFMLVLTWGGNRFAWFSREIVAMLGISLVLAAVFVWHARKASEPFLPLSLIGGSVVPYAIAASALALSAI IGITVHLPLYYQAVHHLGVSESGLALIPIAAVSTGGAMLAGRAMTHTLHYKRIAIVGTAFAAVMAAIMAAVTMPLWPLLA MLSLFAFGLGTIFPVSVVSLQNAVMREQVGTVTGAMNFFRALACSFVVAAFAAILLMTLGTDAMIGHEGGGRLSAIQASD LTRAFRYVFAATAAMMAAAALLLVRMEERPLAGPSA
Sequences:
>Translated_516_residues MNTYERLGRGPSGPPISSGEGAARPGFAEGEGDAPPVVVSPAQPGRSEIRTILVSLMLTMFLAALDQTIVATALPTIGRQ FHDVTTLAWIITAYLLASTAVAPLFGTLSDIYGRRAMIVTALGLFIAGSVLCALAQNMATLIVARGVQGIGGGGILPLVQ TIISDVVTPRERGQYQAYFSGVWTAAGIAGPVLGGVFAEHLHWSMIFWINVPLGLVSLALLLPKMGGIPAFHRRRKVDWT GGLLLMTSAVVFMLVLTWGGNRFAWFSREIVAMLGISLVLAAVFVWHARKASEPFLPLSLIGGSVVPYAIAASALALSAI IGITVHLPLYYQAVHHLGVSESGLALIPIAAVSTGGAMLAGRAMTHTLHYKRIAIVGTAFAAVMAAIMAAVTMPLWPLLA MLSLFAFGLGTIFPVSVVSLQNAVMREQVGTVTGAMNFFRALACSFVVAAFAAILLMTLGTDAMIGHEGGGRLSAIQASD LTRAFRYVFAATAAMMAAAALLLVRMEERPLAGPSA >Mature_516_residues MNTYERLGRGPSGPPISSGEGAARPGFAEGEGDAPPVVVSPAQPGRSEIRTILVSLMLTMFLAALDQTIVATALPTIGRQ FHDVTTLAWIITAYLLASTAVAPLFGTLSDIYGRRAMIVTALGLFIAGSVLCALAQNMATLIVARGVQGIGGGGILPLVQ TIISDVVTPRERGQYQAYFSGVWTAAGIAGPVLGGVFAEHLHWSMIFWINVPLGLVSLALLLPKMGGIPAFHRRRKVDWT GGLLLMTSAVVFMLVLTWGGNRFAWFSREIVAMLGISLVLAAVFVWHARKASEPFLPLSLIGGSVVPYAIAASALALSAI IGITVHLPLYYQAVHHLGVSESGLALIPIAAVSTGGAMLAGRAMTHTLHYKRIAIVGTAFAAVMAAIMAAVTMPLWPLLA MLSLFAFGLGTIFPVSVVSLQNAVMREQVGTVTGAMNFFRALACSFVVAAFAAILLMTLGTDAMIGHEGGGRLSAIQASD LTRAFRYVFAATAAMMAAAALLLVRMEERPLAGPSA
Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. EmrB family [H]
Homologues:
Organism=Escherichia coli, GI1789042, Length=344, Percent_Identity=27.906976744186, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1790195, Length=244, Percent_Identity=31.9672131147541, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1788710, Length=467, Percent_Identity=25.0535331905782, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI87081983, Length=427, Percent_Identity=25.2927400468384, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1788392, Length=328, Percent_Identity=28.0487804878049, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI1790146, Length=282, Percent_Identity=25.177304964539, Blast_Score=66, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323735, Length=439, Percent_Identity=27.3348519362187, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6322958, Length=449, Percent_Identity=26.0579064587973, Blast_Score=120, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6319770, Length=393, Percent_Identity=26.2086513994911, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6325455, Length=253, Percent_Identity=29.6442687747036, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6321663, Length=377, Percent_Identity=23.8726790450928, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6320324, Length=186, Percent_Identity=30.1075268817204, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322071, Length=217, Percent_Identity=24.4239631336406, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6325414, Length=213, Percent_Identity=24.4131455399061, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004638 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 54048; Mature: 54048
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTYERLGRGPSGPPISSGEGAARPGFAEGEGDAPPVVVSPAQPGRSEIRTILVSLMLTM CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH FLAALDQTIVATALPTIGRQFHDVTTLAWIITAYLLASTAVAPLFGTLSDIYGRRAMIVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ALGLFIAGSVLCALAQNMATLIVARGVQGIGGGGILPLVQTIISDVVTPRERGQYQAYFS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHCCCHHHHHH GVWTAAGIAGPVLGGVFAEHLHWSMIFWINVPLGLVSLALLLPKMGGIPAFHRRRKVDWT HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCCHHHHCCCCCCC GGLLLMTSAVVFMLVLTWGGNRFAWFSREIVAMLGISLVLAAVFVWHARKASEPFLPLSL CHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IGGSVVPYAIAASALALSAIIGITVHLPLYYQAVHHLGVSESGLALIPIAAVSTGGAMLA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCHHHH GRAMTHTLHYKRIAIVGTAFAAVMAAIMAAVTMPLWPLLAMLSLFAFGLGTIFPVSVVSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNAVMREQVGTVTGAMNFFRALACSFVVAAFAAILLMTLGTDAMIGHEGGGRLSAIQASD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHH LTRAFRYVFAATAAMMAAAALLLVRMEERPLAGPSA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNTYERLGRGPSGPPISSGEGAARPGFAEGEGDAPPVVVSPAQPGRSEIRTILVSLMLTM CCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHH FLAALDQTIVATALPTIGRQFHDVTTLAWIITAYLLASTAVAPLFGTLSDIYGRRAMIVT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ALGLFIAGSVLCALAQNMATLIVARGVQGIGGGGILPLVQTIISDVVTPRERGQYQAYFS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHCCCHHHHHH GVWTAAGIAGPVLGGVFAEHLHWSMIFWINVPLGLVSLALLLPKMGGIPAFHRRRKVDWT HHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCCCHHHHCCCCCCC GGLLLMTSAVVFMLVLTWGGNRFAWFSREIVAMLGISLVLAAVFVWHARKASEPFLPLSL CHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH IGGSVVPYAIAASALALSAIIGITVHLPLYYQAVHHLGVSESGLALIPIAAVSTGGAMLA HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCCHHHH GRAMTHTLHYKRIAIVGTAFAAVMAAIMAAVTMPLWPLLAMLSLFAFGLGTIFPVSVVSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNAVMREQVGTVTGAMNFFRALACSFVVAAFAAILLMTLGTDAMIGHEGGGRLSAIQASD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHH LTRAFRYVFAATAAMMAAAALLLVRMEERPLAGPSA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]