| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is zraS [C]
Identifier: 75675331
GI number: 75675331
Start: 1248011
End: 1250677
Strand: Direct
Name: zraS [C]
Synonym: Nwi_1138
Alternate gene names: 75675331
Gene position: 1248011-1250677 (Clockwise)
Preceding gene: 75675330
Following gene: 75675338
Centisome position: 36.68
GC content: 64.19
Gene sequence:
>2667_bases ATGGCGGGAAATGAACCCAATGAGGCGCTTGCGCTGCGGGCCCCGATTCAGGCACTCAGGACCCGGCGCAGGCGCATTCC GCGCCCGCCGCGACAGGCCCCGCCGAATTCCATGACGCCAGATCCCGACATCGATTCACCGCAGGTCGGGCAGGAGCCGG CGCGGCGGAGCGGCAGCATCCTCCTGGTCCTGCTGGTCGCGGGCGCGATCGTCACGGCCGCCGTGGCGTTCATGGCGCTG GGGCGTACCGAAGCCCAGCCCTATATTCTGGCGCTGCTGGCCTTGCTGGCGATGGTCGGCCTGTTCACGCTGTTCGCGTT CGCGGCCGGGATCGTTCGCTTCGCGGACCGCACGGTCGATGATCCGCTGATGCGTCCGATAGCCGATCATGCCTTCGACG GCATCGCCGTCACCGATTCCGGCGGGCACATCGTTTATGCCAACTCCGCATATCTCACCCTGACCGGAGCTGCGTCGATG CAGGACGTGCGGCCGGTGGAGCGCGTATTCATCGGCAACCCTGATGTTTCCGAAGCGGTGTTCCGTCTTTTGAAGGCGGC GCGGGAGGGTAAGCGCCAGCAGGAAGAGGTGCGCGTGGCCGCCGCCGACGGCACCAACGGTCGCTGGCTGCGATTGCGGG TTCGCCCGCTCGCACAGGCGAAGCGGTACGCCAGATACGCCGTGTGGTCGATCGCCGACATCACCCGCGACCGCGAGCGG CAAGAAGATGTGTTTCAGGAACTGCGCCATGCGATCGAATATCTCGATCATGCGCCGTGCGGCTTCTTCTCTGTCAACCA GTCAGGCGATCTCGTCTATGTCAATGCCACGCTTGCCAACTGGCTGGATCACGATCTGGCGGAGATCGGTTCGGGGGGCC TGAAGCTGACCGACATCGTTTCGGGAGACGGCGCGGCTTTGCTGACGTCGATCATCGCCGCGCCTGGCGAAGTCCGCACC GAGGTCTTCGATATCGATCTGCGGATGCGCAACGGCAAGACCATGCCGGCGCGCCTGTATCATAAGCTGGCCTTCGGCGC CGACGGCGTGCCGGGGCCGTCGCGGACGCTGGTGGTCAGCCGCGCCCGCGACGAACGCGTCGATCCGCAGCGGGCGGCTG AAGTGCGCTTCATGCGCTTCTTCGACCACACGCCGATGGCGATCGCGACGGTCGATAAGTCCGGCGTTGTCGGTCGCGCC AATGCGCGGTTTGCGAAGCTCGCGCAAAGCCTCAGTCCGGACGGCGCCGTCGCCAGGTCGATTCTCGCCGCTGTCAACGA GCGCGATCGCGGCCAACTGAGCGCGGCGATTCTCGCCGCGGCGGACGGGCAGGGTGATATTCCGCCGGTCGAAGTGATGT TGAGTGGCGCGCGCGAGCGGTGGGGGCAGTTCTTCGTCACCGCGGTGGAGGACGATCACGATGCGGAAGCCGCGATCGTC TACATGCTCGAGACGACCGAGCGGCGCACGCTCGAGAGCCAGATCAATCAATCCCAAAAGATGGAGTCGGTCGGCCAGCT CGCCGGTGGCATCGCGCATGATTTCAACAATGTTCTGTCCGCCATCATGATGGCGAACGACTTCCTGCTGAACGCGCACA AGCCGACCGATCCGTCTTTTCAGGACATCATGCAGATCAAGCAGAACGCCAATCGCGCTGCCGCTTTGGTGCGGCAGTTG CTGGCGTTCTCGCGGCGGCAGACCTTGCAGCCGAAGGTGCTCGATCTCGGCGACACCCTGAGTGACATCGGCATGTTGCT GAAACGTTTGATCGGCGAAAAGGTCACTTTCCCCGGCGTCGTTCATGGCCGAGACCTGTGGCCGGTCAAGGCCGACGTCT CGCAGTTCGAGCAGGTGATCGTCAATCTCGTGGTCAATGCGCGCGACGCCATGCCGGACGGCGGCAAGCTCGCGATCCGC ACCACGAACGTCGCGGCCGCGGAGGTCGCGACGTTCGGCCACAAGGGATTGCCGCCCGCCGACTACGTGCTCGTCGAGAT CAGCGACACCGGCACCGGCATTCCGCCCGATATCGTCGACAAGATTTTCGAGCCGTTTTTTTCCACCAAGGAGGTAGGCA AGGGTACCGGGCTCGGCCTGTCCACGGTCTACGGCATCGTGAAGCAGACCGGCGGTTTCATCTACGTCGACTCCAGAACG GGCGAGGGCACGACGTTCCGTATCTTCCTGCCGCGCCATCACCCCCAGGCCGAGGCGCTGCCGGCGTCGCCCGGCCTTCT CGGCGAGGCAAAGGAGCCGTCCTCAACAGCCAAGCCGGTGAATACCGATCTGACCGGGCAGGGCACCATCCTGCTGGTGG AAGACGAGGAGGGGTTGCGCTCGCTCAATGCGCGTGGCCTGCGTTCGCGCGGCTACAGCGTGATCGAGGCTTCCAACGGC ATCGAAGCACTGGAAGCGCTCGACGAGAAGGACGGTGCTGTCGATCTGGTGGTCTCCGACGTCGTTATGCCCGAAATGGA CGGGCCGACCCTGCTGCGGAAAATGCGGGTGCGCAATCCCAACCTCAAGATCATTTTTGTGTCGGGTTACGCGGAAGAAG CGTTCGACAAGAGTCTGCCGGAAAACGAGCAGTTCGCTTTCCTGGCGAAGCCTTTCGCGCTCAGTGCGCTGATTGCCAAG GTCAAGGAGACGATGACGGCGGCATAA
Upstream 100 bases:
>100_bases CGAAATCATCGGTTACGTCATGGGGTTGAAGCGCGGCCTTTCGGGACGCCGGGTTTGAGGCCGGCCAGCGGGCAATGGGA ACAGCATCGGGGCAGCGAAA
Downstream 100 bases:
>100_bases TTGTTAGGCGGCAGCATTTCCACTCGTCATGGCCGGGCTTTGTCCCGGCCATCCACGTCTTGCTGACGAAAGAAGAACCT GGATGCCCGGCACAAGGCCT
Product: Signal transduction histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 888; Mature: 887
Protein sequence:
>888_residues MAGNEPNEALALRAPIQALRTRRRRIPRPPRQAPPNSMTPDPDIDSPQVGQEPARRSGSILLVLLVAGAIVTAAVAFMAL GRTEAQPYILALLALLAMVGLFTLFAFAAGIVRFADRTVDDPLMRPIADHAFDGIAVTDSGGHIVYANSAYLTLTGAASM QDVRPVERVFIGNPDVSEAVFRLLKAAREGKRQQEEVRVAAADGTNGRWLRLRVRPLAQAKRYARYAVWSIADITRDRER QEDVFQELRHAIEYLDHAPCGFFSVNQSGDLVYVNATLANWLDHDLAEIGSGGLKLTDIVSGDGAALLTSIIAAPGEVRT EVFDIDLRMRNGKTMPARLYHKLAFGADGVPGPSRTLVVSRARDERVDPQRAAEVRFMRFFDHTPMAIATVDKSGVVGRA NARFAKLAQSLSPDGAVARSILAAVNERDRGQLSAAILAAADGQGDIPPVEVMLSGARERWGQFFVTAVEDDHDAEAAIV YMLETTERRTLESQINQSQKMESVGQLAGGIAHDFNNVLSAIMMANDFLLNAHKPTDPSFQDIMQIKQNANRAAALVRQL LAFSRRQTLQPKVLDLGDTLSDIGMLLKRLIGEKVTFPGVVHGRDLWPVKADVSQFEQVIVNLVVNARDAMPDGGKLAIR TTNVAAAEVATFGHKGLPPADYVLVEISDTGTGIPPDIVDKIFEPFFSTKEVGKGTGLGLSTVYGIVKQTGGFIYVDSRT GEGTTFRIFLPRHHPQAEALPASPGLLGEAKEPSSTAKPVNTDLTGQGTILLVEDEEGLRSLNARGLRSRGYSVIEASNG IEALEALDEKDGAVDLVVSDVVMPEMDGPTLLRKMRVRNPNLKIIFVSGYAEEAFDKSLPENEQFAFLAKPFALSALIAK VKETMTAA
Sequences:
>Translated_888_residues MAGNEPNEALALRAPIQALRTRRRRIPRPPRQAPPNSMTPDPDIDSPQVGQEPARRSGSILLVLLVAGAIVTAAVAFMAL GRTEAQPYILALLALLAMVGLFTLFAFAAGIVRFADRTVDDPLMRPIADHAFDGIAVTDSGGHIVYANSAYLTLTGAASM QDVRPVERVFIGNPDVSEAVFRLLKAAREGKRQQEEVRVAAADGTNGRWLRLRVRPLAQAKRYARYAVWSIADITRDRER QEDVFQELRHAIEYLDHAPCGFFSVNQSGDLVYVNATLANWLDHDLAEIGSGGLKLTDIVSGDGAALLTSIIAAPGEVRT EVFDIDLRMRNGKTMPARLYHKLAFGADGVPGPSRTLVVSRARDERVDPQRAAEVRFMRFFDHTPMAIATVDKSGVVGRA NARFAKLAQSLSPDGAVARSILAAVNERDRGQLSAAILAAADGQGDIPPVEVMLSGARERWGQFFVTAVEDDHDAEAAIV YMLETTERRTLESQINQSQKMESVGQLAGGIAHDFNNVLSAIMMANDFLLNAHKPTDPSFQDIMQIKQNANRAAALVRQL LAFSRRQTLQPKVLDLGDTLSDIGMLLKRLIGEKVTFPGVVHGRDLWPVKADVSQFEQVIVNLVVNARDAMPDGGKLAIR TTNVAAAEVATFGHKGLPPADYVLVEISDTGTGIPPDIVDKIFEPFFSTKEVGKGTGLGLSTVYGIVKQTGGFIYVDSRT GEGTTFRIFLPRHHPQAEALPASPGLLGEAKEPSSTAKPVNTDLTGQGTILLVEDEEGLRSLNARGLRSRGYSVIEASNG IEALEALDEKDGAVDLVVSDVVMPEMDGPTLLRKMRVRNPNLKIIFVSGYAEEAFDKSLPENEQFAFLAKPFALSALIAK VKETMTAA >Mature_887_residues AGNEPNEALALRAPIQALRTRRRRIPRPPRQAPPNSMTPDPDIDSPQVGQEPARRSGSILLVLLVAGAIVTAAVAFMALG RTEAQPYILALLALLAMVGLFTLFAFAAGIVRFADRTVDDPLMRPIADHAFDGIAVTDSGGHIVYANSAYLTLTGAASMQ DVRPVERVFIGNPDVSEAVFRLLKAAREGKRQQEEVRVAAADGTNGRWLRLRVRPLAQAKRYARYAVWSIADITRDRERQ EDVFQELRHAIEYLDHAPCGFFSVNQSGDLVYVNATLANWLDHDLAEIGSGGLKLTDIVSGDGAALLTSIIAAPGEVRTE VFDIDLRMRNGKTMPARLYHKLAFGADGVPGPSRTLVVSRARDERVDPQRAAEVRFMRFFDHTPMAIATVDKSGVVGRAN ARFAKLAQSLSPDGAVARSILAAVNERDRGQLSAAILAAADGQGDIPPVEVMLSGARERWGQFFVTAVEDDHDAEAAIVY MLETTERRTLESQINQSQKMESVGQLAGGIAHDFNNVLSAIMMANDFLLNAHKPTDPSFQDIMQIKQNANRAAALVRQLL AFSRRQTLQPKVLDLGDTLSDIGMLLKRLIGEKVTFPGVVHGRDLWPVKADVSQFEQVIVNLVVNARDAMPDGGKLAIRT TNVAAAEVATFGHKGLPPADYVLVEISDTGTGIPPDIVDKIFEPFFSTKEVGKGTGLGLSTVYGIVKQTGGFIYVDSRTG EGTTFRIFLPRHHPQAEALPASPGLLGEAKEPSSTAKPVNTDLTGQGTILLVEDEEGLRSLNARGLRSRGYSVIEASNGI EALEALDEKDGAVDLVVSDVVMPEMDGPTLLRKMRVRNPNLKIIFVSGYAEEAFDKSLPENEQFAFLAKPFALSALIAKV KETMTAA
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=253, Percent_Identity=28.4584980237154, Blast_Score=105, Evalue=2e-23, Organism=Escherichia coli, GI1788549, Length=308, Percent_Identity=27.2727272727273, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1788713, Length=259, Percent_Identity=29.7297297297297, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1790300, Length=259, Percent_Identity=31.2741312741313, Blast_Score=76, Evalue=9e-15, Organism=Escherichia coli, GI87081816, Length=257, Percent_Identity=27.6264591439689, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI48994928, Length=283, Percent_Identity=30.7420494699647, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI1790299, Length=122, Percent_Identity=31.1475409836066, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 96223; Mature: 96092
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS50112 PAS ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGNEPNEALALRAPIQALRTRRRRIPRPPRQAPPNSMTPDPDIDSPQVGQEPARRSGSI CCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCE LLVLLVAGAIVTAAVAFMALGRTEAQPYILALLALLAMVGLFTLFAFAAGIVRFADRTVD EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPLMRPIADHAFDGIAVTDSGGHIVYANSAYLTLTGAASMQDVRPVERVFIGNPDVSEAV CHHHHHHHHHCCCCEEEECCCCEEEEECCEEEEEECCCCHHHCCHHHHHCCCCCCHHHHH FRLLKAAREGKRQQEEVRVAAADGTNGRWLRLRVRPLAQAKRYARYAVWSIADITRDRER HHHHHHHHHCCCHHHHEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH QEDVFQELRHAIEYLDHAPCGFFSVNQSGDLVYVNATLANWLDHDLAEIGSGGLKLTDIV HHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEEE SGDGAALLTSIIAAPGEVRTEVFDIDLRMRNGKTMPARLYHKLAFGADGVPGPSRTLVVS CCCCHHHHHHHHHCCCHHEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEE RARDERVDPQRAAEVRFMRFFDHTPMAIATVDKSGVVGRANARFAKLAQSLSPDGAVARS CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCHHHHHHHHHCCCCHHHHHH ILAAVNERDRGQLSAAILAAADGQGDIPPVEVMLSGARERWGQFFVTAVEDDHDAEAAIV HHHHHCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEE YMLETTERRTLESQINQSQKMESVGQLAGGIAHDFNNVLSAIMMANDFLLNAHKPTDPSF EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCH QDIMQIKQNANRAAALVRQLLAFSRRQTLQPKVLDLGDTLSDIGMLLKRLIGEKVTFPGV HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCE VHGRDLWPVKADVSQFEQVIVNLVVNARDAMPDGGKLAIRTTNVAAAEVATFGHKGLPPA ECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCCCCC DYVLVEISDTGTGIPPDIVDKIFEPFFSTKEVGKGTGLGLSTVYGIVKQTGGFIYVDSRT CEEEEEEECCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCC GEGTTFRIFLPRHHPQAEALPASPGLLGEAKEPSSTAKPVNTDLTGQGTILLVEDEEGLR CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHH SLNARGLRSRGYSVIEASNGIEALEALDEKDGAVDLVVSDVVMPEMDGPTLLRKMRVRNP HHCCCCHHHCCCEEEECCCCHHHHHHHHCCCCCEEEEEHHHHCCCCCCHHHHHHHHCCCC NLKIIFVSGYAEEAFDKSLPENEQFAFLAKPFALSALIAKVKETMTAA CEEEEEEECCHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGNEPNEALALRAPIQALRTRRRRIPRPPRQAPPNSMTPDPDIDSPQVGQEPARRSGSI CCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCE LLVLLVAGAIVTAAVAFMALGRTEAQPYILALLALLAMVGLFTLFAFAAGIVRFADRTVD EHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DPLMRPIADHAFDGIAVTDSGGHIVYANSAYLTLTGAASMQDVRPVERVFIGNPDVSEAV CHHHHHHHHHCCCCEEEECCCCEEEEECCEEEEEECCCCHHHCCHHHHHCCCCCCHHHHH FRLLKAAREGKRQQEEVRVAAADGTNGRWLRLRVRPLAQAKRYARYAVWSIADITRDRER HHHHHHHHHCCCHHHHEEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHH QEDVFQELRHAIEYLDHAPCGFFSVNQSGDLVYVNATLANWLDHDLAEIGSGGLKLTDIV HHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEEE SGDGAALLTSIIAAPGEVRTEVFDIDLRMRNGKTMPARLYHKLAFGADGVPGPSRTLVVS CCCCHHHHHHHHHCCCHHEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEE RARDERVDPQRAAEVRFMRFFDHTPMAIATVDKSGVVGRANARFAKLAQSLSPDGAVARS CCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCHHHHHHHHHCCCCHHHHHH ILAAVNERDRGQLSAAILAAADGQGDIPPVEVMLSGARERWGQFFVTAVEDDHDAEAAIV HHHHHCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEE YMLETTERRTLESQINQSQKMESVGQLAGGIAHDFNNVLSAIMMANDFLLNAHKPTDPSF EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCH QDIMQIKQNANRAAALVRQLLAFSRRQTLQPKVLDLGDTLSDIGMLLKRLIGEKVTFPGV HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCCCCE VHGRDLWPVKADVSQFEQVIVNLVVNARDAMPDGGKLAIRTTNVAAAEVATFGHKGLPPA ECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCCCCCC DYVLVEISDTGTGIPPDIVDKIFEPFFSTKEVGKGTGLGLSTVYGIVKQTGGFIYVDSRT CEEEEEEECCCCCCCHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHCCCEEEEECCC GEGTTFRIFLPRHHPQAEALPASPGLLGEAKEPSSTAKPVNTDLTGQGTILLVEDEEGLR CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHH SLNARGLRSRGYSVIEASNGIEALEALDEKDGAVDLVVSDVVMPEMDGPTLLRKMRVRNP HHCCCCHHHCCCEEEECCCCHHHHHHHHCCCCCEEEEEHHHHCCCCCCHHHHHHHHCCCC NLKIIFVSGYAEEAFDKSLPENEQFAFLAKPFALSALIAKVKETMTAA CEEEEEEECCHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA