| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675322
Identifier: 75675322
GI number: 75675322
Start: 1240837
End: 1242381
Strand: Direct
Name: 75675322
Synonym: Nwi_1129
Alternate gene names: NA
Gene position: 1240837-1242381 (Clockwise)
Preceding gene: 75675320
Following gene: 75675325
Centisome position: 36.47
GC content: 57.8
Gene sequence:
>1545_bases ATGAGTTTGATGAAGAGCGTTGTTTTCGACATGACGGCAAGGCTGGTTTTGCTGTCGGCCATTCCGCTTGTCGCCATCGC TTCGAGTCCTGCGCAGGCGCAACCTCGATCCCATGCTGAGGTACAGGCACAGGGGGATCCGAGCCATACCAATGGCCGTA ACGGAGGCACCCAGCCGCAGCCGGAAATATGGCCCAAGTTCAAGCCGAGCACGTCAAAGCCGTTGTTCTCACTCTATGAT GCACTAGGACGGCCCGACAACTTCACGATCCGCGGGACGTTTCGTTCCCGCGCAGAAGGAGTCGCCAACGCTTTTCGTCC AGCGCCTTTTCCGCGCGATGAATTCGCGAACATGCTTTTCGGTACGATATTCGCCGAGTACGATACCGGACACAATGTGA AGATCGGCGGGGAAATCCTGGATGCCCGCAGCTACTTCCAGAAGAATAATTCGGTGGTCTCCGCCCTCGACGTGAATGCT TTCGAGCTTACGCAGGCTTATCTCAACTTCGATCTTTCCGACGTCACAGGCGATGGATCGAAGAGCAGCGTCACCGCCGG TCGCTTCACGAAAGACGTCGGCTCGCGTCGTTATATGTCGCGTCAGCAGTATCGTAACAACACTAACGCCTACACTGGTG TTTCCTACGACTGGAAGGGTGCGAACAAGGACCGCTGGACCGTGTTCTGGACCATGCCGCACATCCGGTTGCCTGATGAT GCGCAGGGCGTTCGCGATAACGCGGTCGAGTATGACCGGGAGAGTCCGGATCTTCAGTTTTACGGCAGCTCCTATACCTT TGCTGATGTATTTGGCGGATCGCTGGAGCTCTTTGGCTACGGTCTGTATGAACAGGATTCAGGCACGAGCCTGCTGAACT CGATGCAGACCCGTAACCGCCGGCTGTTCACTCCAGGCGCCCGGCTGTTTCGGGGCGCGAAGCCCGGGAGGTTCGATTAT GAATTCGAGGGTGTTTATCAGGCGGGTCTGGCCCGGGCGACGACCGCCGTCACCGACACGCGCGACCTTGATGTTTCAGC CTATTTCGTTCATGCGGAGACGGGTTACACGTTTGCTGTGCCGTGGCTCCCACGGCTGTCGCTGATATACGATCACGCCA GTGGCGACAACGGCAACCCCTCCACCTTCAACCGTTTCGACAGTCTGTTCGGCGTTCGCCGTGAATACAATGCGCCGAGT CTGTACGGGCCGATGACGCGTGCGAATCTGATCACGCCGGCTGTGCGCCTTTACGTCACGCCGAGCTCGATCTGGGATGC GTTCGTTACATACCGCGCGATCTGGCTGGATAGCGCCACCGACGTCTTCGGCGCAACACAATTACGCGATCGCTCAGGTC AATCCGGCCGCTTCGCCGGCCACCAGATAGAGGCTCGCCTGCGGTATTGGCTCATCCCGGATGCCATTTTGCTCGAAACC GGGGCTGCCTACCTTGTCAAAGGCAGATTCTTGAGGGATGCGCCCAACGCGCCAGATGGGGGCGACACCATCTATGGTTA TCTCGCTACGCAAATCTTCTTCTAA
Upstream 100 bases:
>100_bases GCGGACGGCTGCCTTGATTGAGGACTGCGTGAAACTTGGTTTCGAATGTTGTGCTTCGCGGATCTGAATCAATGCCGCGG AGCAACTTGGGAAGTTGGTA
Downstream 100 bases:
>100_bases ACAGGCGTTGGCTTAAACAATGCGCCTGGAACCAATTCACTCTCGACTATGAGTAGAATTTCATCCCGTCGAATCGGGTT AGCTCAGGTCCCGTAGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MSLMKSVVFDMTARLVLLSAIPLVAIASSPAQAQPRSHAEVQAQGDPSHTNGRNGGTQPQPEIWPKFKPSTSKPLFSLYD ALGRPDNFTIRGTFRSRAEGVANAFRPAPFPRDEFANMLFGTIFAEYDTGHNVKIGGEILDARSYFQKNNSVVSALDVNA FELTQAYLNFDLSDVTGDGSKSSVTAGRFTKDVGSRRYMSRQQYRNNTNAYTGVSYDWKGANKDRWTVFWTMPHIRLPDD AQGVRDNAVEYDRESPDLQFYGSSYTFADVFGGSLELFGYGLYEQDSGTSLLNSMQTRNRRLFTPGARLFRGAKPGRFDY EFEGVYQAGLARATTAVTDTRDLDVSAYFVHAETGYTFAVPWLPRLSLIYDHASGDNGNPSTFNRFDSLFGVRREYNAPS LYGPMTRANLITPAVRLYVTPSSIWDAFVTYRAIWLDSATDVFGATQLRDRSGQSGRFAGHQIEARLRYWLIPDAILLET GAAYLVKGRFLRDAPNAPDGGDTIYGYLATQIFF
Sequences:
>Translated_514_residues MSLMKSVVFDMTARLVLLSAIPLVAIASSPAQAQPRSHAEVQAQGDPSHTNGRNGGTQPQPEIWPKFKPSTSKPLFSLYD ALGRPDNFTIRGTFRSRAEGVANAFRPAPFPRDEFANMLFGTIFAEYDTGHNVKIGGEILDARSYFQKNNSVVSALDVNA FELTQAYLNFDLSDVTGDGSKSSVTAGRFTKDVGSRRYMSRQQYRNNTNAYTGVSYDWKGANKDRWTVFWTMPHIRLPDD AQGVRDNAVEYDRESPDLQFYGSSYTFADVFGGSLELFGYGLYEQDSGTSLLNSMQTRNRRLFTPGARLFRGAKPGRFDY EFEGVYQAGLARATTAVTDTRDLDVSAYFVHAETGYTFAVPWLPRLSLIYDHASGDNGNPSTFNRFDSLFGVRREYNAPS LYGPMTRANLITPAVRLYVTPSSIWDAFVTYRAIWLDSATDVFGATQLRDRSGQSGRFAGHQIEARLRYWLIPDAILLET GAAYLVKGRFLRDAPNAPDGGDTIYGYLATQIFF >Mature_513_residues SLMKSVVFDMTARLVLLSAIPLVAIASSPAQAQPRSHAEVQAQGDPSHTNGRNGGTQPQPEIWPKFKPSTSKPLFSLYDA LGRPDNFTIRGTFRSRAEGVANAFRPAPFPRDEFANMLFGTIFAEYDTGHNVKIGGEILDARSYFQKNNSVVSALDVNAF ELTQAYLNFDLSDVTGDGSKSSVTAGRFTKDVGSRRYMSRQQYRNNTNAYTGVSYDWKGANKDRWTVFWTMPHIRLPDDA QGVRDNAVEYDRESPDLQFYGSSYTFADVFGGSLELFGYGLYEQDSGTSLLNSMQTRNRRLFTPGARLFRGAKPGRFDYE FEGVYQAGLARATTAVTDTRDLDVSAYFVHAETGYTFAVPWLPRLSLIYDHASGDNGNPSTFNRFDSLFGVRREYNAPSL YGPMTRANLITPAVRLYVTPSSIWDAFVTYRAIWLDSATDVFGATQLRDRSGQSGRFAGHQIEARLRYWLIPDAILLETG AAYLVKGRFLRDAPNAPDGGDTIYGYLATQIFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57303; Mature: 57172
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLMKSVVFDMTARLVLLSAIPLVAIASSPAQAQPRSHAEVQAQGDPSHTNGRNGGTQPQ CHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC PEIWPKFKPSTSKPLFSLYDALGRPDNFTIRGTFRSRAEGVANAFRPAPFPRDEFANMLF CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHH GTIFAEYDTGHNVKIGGEILDARSYFQKNNSVVSALDVNAFELTQAYLNFDLSDVTGDGS HHHHEECCCCCCEEECCEEHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHCCCCCC KSSVTAGRFTKDVGSRRYMSRQQYRNNTNAYTGVSYDWKGANKDRWTVFWTMPHIRLPDD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCEEECCCCCCCEEEEEEECCCEECCCC AQGVRDNAVEYDRESPDLQFYGSSYTFADVFGGSLELFGYGLYEQDSGTSLLNSMQTRNR CCCCCCCCHHCCCCCCCEEEECCCEEEHHHCCCCEEEEEEEEEECCCCHHHHHHHHHCCC RLFTPGARLFRGAKPGRFDYEFEGVYQAGLARATTAVTDTRDLDVSAYFVHAETGYTFAV EEECCCHHHHCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEE PWLPRLSLIYDHASGDNGNPSTFNRFDSLFGVRREYNAPSLYGPMTRANLITPAVRLYVT CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEC PSSIWDAFVTYRAIWLDSATDVFGATQLRDRSGQSGRFAGHQIEARLRYWLIPDAILLET CHHHHHHHHHHHHEEECCCHHHHCCHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHC GAAYLVKGRFLRDAPNAPDGGDTIYGYLATQIFF CCEEEEECCHHCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SLMKSVVFDMTARLVLLSAIPLVAIASSPAQAQPRSHAEVQAQGDPSHTNGRNGGTQPQ HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC PEIWPKFKPSTSKPLFSLYDALGRPDNFTIRGTFRSRAEGVANAFRPAPFPRDEFANMLF CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCCCCHHHHHHHHH GTIFAEYDTGHNVKIGGEILDARSYFQKNNSVVSALDVNAFELTQAYLNFDLSDVTGDGS HHHHEECCCCCCEEECCEEHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHCCCCCC KSSVTAGRFTKDVGSRRYMSRQQYRNNTNAYTGVSYDWKGANKDRWTVFWTMPHIRLPDD CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCEEECCCCCCCEEEEEEECCCEECCCC AQGVRDNAVEYDRESPDLQFYGSSYTFADVFGGSLELFGYGLYEQDSGTSLLNSMQTRNR CCCCCCCCHHCCCCCCCEEEECCCEEEHHHCCCCEEEEEEEEEECCCCHHHHHHHHHCCC RLFTPGARLFRGAKPGRFDYEFEGVYQAGLARATTAVTDTRDLDVSAYFVHAETGYTFAV EEECCCHHHHCCCCCCCCCCEECHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEE PWLPRLSLIYDHASGDNGNPSTFNRFDSLFGVRREYNAPSLYGPMTRANLITPAVRLYVT CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEC PSSIWDAFVTYRAIWLDSATDVFGATQLRDRSGQSGRFAGHQIEARLRYWLIPDAILLET CHHHHHHHHHHHHEEECCCHHHHCCHHHHHCCCCCCCCCCCEEEEEEEEEECCCHHHHHC GAAYLVKGRFLRDAPNAPDGGDTIYGYLATQIFF CCEEEEECCHHCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA