| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is cutL [H]
Identifier: 75675272
GI number: 75675272
Start: 1182912
End: 1185203
Strand: Direct
Name: cutL [H]
Synonym: Nwi_1079
Alternate gene names: 75675272
Gene position: 1182912-1185203 (Clockwise)
Preceding gene: 75675271
Following gene: 75675275
Centisome position: 34.77
GC content: 64.57
Gene sequence:
>2292_bases ATGGCTCCCGTCAAGTTCGGCATAGGCCAGAGCGTCCGGCGCAAGGAAGACGACGCCTTCATTCGCGGCAAGGGGCGCTA TACCGACGATCACGCGCCGCCCGATGCGCTACATGCGCTGATGCTGCGCTCACCCCATGCTCATGCGGCGTACAGGATCG ATGTGTCGCGCGCCTGTCGCTTGCCGGGGGTTGCCCTGATCCTCACCGCGACAGATGTCGCCGATCTCGGGGGCCTGCCC TGTCAGGTCGAGTTGCCGGACCAGCCTTTCATTGCGCCGCCATATCCTATCCTGCCGAAGGATGAAGTGCGGCATGTCGG GGACGCCATCGCTTTTGTGGTGGCCGATACGGTCGAGCGCGCGCGCGACGCGCTGGAGGCGATCGAGGTCGAGTGGACGC CGCTGGCCTCCGTCGTCGGCGTTGCCGATGCCGTGAGGGATGGCGCGCCTCAGGTGTGGCCCGATCACGCCGGCAACGTT TTGTTCGACGTTTCGCTCGGCGACAGGAAGGCGGCCGATGCCGCTTTCGCCGCGGCGGATGCCGTGGCCGAGATTTCGAT CGTCAACCCGCGCGTCGTCACCAACTATATGGAGACGCGCGCCGCGGTCTGCGTGTACGACGCGAGGCGAGACCATCTGA CCTTGACGGTCGGCAGCCAGGGCAGCCATCGCCTGCGTGAGATTCTCTGCGAGAACGTGCTGGGGATACCGCTGGAAAAG ATGCGCGTGATCTGTCCCGATGTCGGCGGCGGATTCGGCACCAAGCTGTTTCCCTATCGCGAATATGCGCTGATCGCGGT CGCCGCGAAGAAACTTCACACGGCGATCAGATGGACGGCGGAGAGGTCGGACCATTTCGTCGGCGACTCGCAGGGGCGCG ACAACGTCACCACCGCGCGCATGGCGCTGGCCGGCGACGGCAGGTTCCTCGGCATGGATGTCGATCTGATGGGAGATATG GGCGCCTATCTATCGACCTTCGGTCCCGACATTCCCTATAGCGGGGCCGGGATGCTACCGGGCCTCTACGATATCCAGGC ATTTCATTGCCGTGTCCGCGCGGTGTTCACCAACACCGTGCCGGTCGATGCCTATCGCGGCGCAGGCCGGCCCGAGGCGG CCTATGTCGTGGAGCGGCTGGTCGATGCCGCGGCACGCAAGATCGGCATGACGCCGGATGCGATCCGGCGCAAAAACTTC ATTCCGCCGGAGGCGATGCCGTACAGGACCGCGACGGGCAAGATCTATGACTCCGGCGATTTCGCGGCCCACATGGCGCG CGCGATGGAGATCGCGAAATGGCGGGAGTTTGCCGGCCGGGCCGAGGCTGCAAAAGAGCGGGGCCTTGTTCGTGGCATCG GTTTGGCCACCTATGTCGAGGTCTGCGGCACCATGGGGCGCGAGCGGGCGGATGTGCGGCTTGACGCCAACGGCGACGTT ACGGTGCTGATCGGCACGCAATCAACCGGGCAGGGCCATGCCACCGCCTATGCGCAGATTATCGCCGATCAGTTCGGGAT ACCTCCCGAGCGGGTTCACATGAAGCAGGGCGATACCGATGTGGTCACCACCGGACTCGGTACCGGCGGATCGAGTTCGA TTCCCTCCGGCGGCGTCAGCGTCGAGCGGGCAACCCGCAAGCTCGGCGTCAGACTTCGGGAGATCGCGTCCGAGGCGCTC GAAACCAGCGCCGCCGACCTTGAGATCAGCGACGGTTCGATCCGTATCGCCGGCACGGACCGCTTCGTTTCCTTCGCCGA CCTCGCGAAGCGCGCTGATCTGTCGAAGCTGACCGCCGACGAGAGTTTCAGCAGCGCCGACGGCACTTATCCCAACGGCA CCCATGTCGTGGAAGTCGAGATCGATCCGGCGACTGGAAAGATCGAGTTGGTGAATTACGTGGTGGTCGACGATTTCGGC GTGACGTTGAATCCATTGCTTCTGGCGGGGCAGGTCCATGGCGGCGCCATGCAGGGCATCGGCCAGGCGCTTATGGAGCA GACGGTCTATGATGCGGATGGGCAGCTTGTCACCGGAACGTTGATGGATTATGCGGTGCCGCGCGCGGCCGACGGGGTCT CGATCACATTCGAGACCCGCAACGTTCCCTGCGCCACCAATCCTCTCGGGATCAAGGGAGCAGGCGAGGCGGGCGCCATC GGTTCCTGCCCGGCGGTGGTCAATGCCATCATCGATGGTTTGTGGCGGGAGTACGGAATCGACCACATCGACATGCCTGC GACTCCGGAACGGGTCTGGACGGCGATCCGGGACGCTCAGCGACGCTTGTGA
Upstream 100 bases:
>100_bases GCGCGAACATTGCGCTCGGTGCTGTTCCGCTGCACTATTGCGGTGATCCGGGACGATAGCTTGGAGTTCCCATGGCTTTC ATAAAACGGCTCCCGTAAAA
Downstream 100 bases:
>100_bases AGTAATAGGGCCGGAAAGCCTACTTCGTGACCTGCCCGCGGATTTCGCCGCCGGGATGGTCCGCGGTATGGACGTTGACA TAATACCTGCCGGCCAGCAG
Product: aldehyde oxidase and xanthine dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 763; Mature: 762
Protein sequence:
>763_residues MAPVKFGIGQSVRRKEDDAFIRGKGRYTDDHAPPDALHALMLRSPHAHAAYRIDVSRACRLPGVALILTATDVADLGGLP CQVELPDQPFIAPPYPILPKDEVRHVGDAIAFVVADTVERARDALEAIEVEWTPLASVVGVADAVRDGAPQVWPDHAGNV LFDVSLGDRKAADAAFAAADAVAEISIVNPRVVTNYMETRAAVCVYDARRDHLTLTVGSQGSHRLREILCENVLGIPLEK MRVICPDVGGGFGTKLFPYREYALIAVAAKKLHTAIRWTAERSDHFVGDSQGRDNVTTARMALAGDGRFLGMDVDLMGDM GAYLSTFGPDIPYSGAGMLPGLYDIQAFHCRVRAVFTNTVPVDAYRGAGRPEAAYVVERLVDAAARKIGMTPDAIRRKNF IPPEAMPYRTATGKIYDSGDFAAHMARAMEIAKWREFAGRAEAAKERGLVRGIGLATYVEVCGTMGRERADVRLDANGDV TVLIGTQSTGQGHATAYAQIIADQFGIPPERVHMKQGDTDVVTTGLGTGGSSSIPSGGVSVERATRKLGVRLREIASEAL ETSAADLEISDGSIRIAGTDRFVSFADLAKRADLSKLTADESFSSADGTYPNGTHVVEVEIDPATGKIELVNYVVVDDFG VTLNPLLLAGQVHGGAMQGIGQALMEQTVYDADGQLVTGTLMDYAVPRAADGVSITFETRNVPCATNPLGIKGAGEAGAI GSCPAVVNAIIDGLWREYGIDHIDMPATPERVWTAIRDAQRRL
Sequences:
>Translated_763_residues MAPVKFGIGQSVRRKEDDAFIRGKGRYTDDHAPPDALHALMLRSPHAHAAYRIDVSRACRLPGVALILTATDVADLGGLP CQVELPDQPFIAPPYPILPKDEVRHVGDAIAFVVADTVERARDALEAIEVEWTPLASVVGVADAVRDGAPQVWPDHAGNV LFDVSLGDRKAADAAFAAADAVAEISIVNPRVVTNYMETRAAVCVYDARRDHLTLTVGSQGSHRLREILCENVLGIPLEK MRVICPDVGGGFGTKLFPYREYALIAVAAKKLHTAIRWTAERSDHFVGDSQGRDNVTTARMALAGDGRFLGMDVDLMGDM GAYLSTFGPDIPYSGAGMLPGLYDIQAFHCRVRAVFTNTVPVDAYRGAGRPEAAYVVERLVDAAARKIGMTPDAIRRKNF IPPEAMPYRTATGKIYDSGDFAAHMARAMEIAKWREFAGRAEAAKERGLVRGIGLATYVEVCGTMGRERADVRLDANGDV TVLIGTQSTGQGHATAYAQIIADQFGIPPERVHMKQGDTDVVTTGLGTGGSSSIPSGGVSVERATRKLGVRLREIASEAL ETSAADLEISDGSIRIAGTDRFVSFADLAKRADLSKLTADESFSSADGTYPNGTHVVEVEIDPATGKIELVNYVVVDDFG VTLNPLLLAGQVHGGAMQGIGQALMEQTVYDADGQLVTGTLMDYAVPRAADGVSITFETRNVPCATNPLGIKGAGEAGAI GSCPAVVNAIIDGLWREYGIDHIDMPATPERVWTAIRDAQRRL >Mature_762_residues APVKFGIGQSVRRKEDDAFIRGKGRYTDDHAPPDALHALMLRSPHAHAAYRIDVSRACRLPGVALILTATDVADLGGLPC QVELPDQPFIAPPYPILPKDEVRHVGDAIAFVVADTVERARDALEAIEVEWTPLASVVGVADAVRDGAPQVWPDHAGNVL FDVSLGDRKAADAAFAAADAVAEISIVNPRVVTNYMETRAAVCVYDARRDHLTLTVGSQGSHRLREILCENVLGIPLEKM RVICPDVGGGFGTKLFPYREYALIAVAAKKLHTAIRWTAERSDHFVGDSQGRDNVTTARMALAGDGRFLGMDVDLMGDMG AYLSTFGPDIPYSGAGMLPGLYDIQAFHCRVRAVFTNTVPVDAYRGAGRPEAAYVVERLVDAAARKIGMTPDAIRRKNFI PPEAMPYRTATGKIYDSGDFAAHMARAMEIAKWREFAGRAEAAKERGLVRGIGLATYVEVCGTMGRERADVRLDANGDVT VLIGTQSTGQGHATAYAQIIADQFGIPPERVHMKQGDTDVVTTGLGTGGSSSIPSGGVSVERATRKLGVRLREIASEALE TSAADLEISDGSIRIAGTDRFVSFADLAKRADLSKLTADESFSSADGTYPNGTHVVEVEIDPATGKIELVNYVVVDDFGV TLNPLLLAGQVHGGAMQGIGQALMEQTVYDADGQLVTGTLMDYAVPRAADGVSITFETRNVPCATNPLGIKGAGEAGAIG SCPAVVNAIIDGLWREYGIDHIDMPATPERVWTAIRDAQRRL
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=779, Percent_Identity=24.6469833119384, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI91823271, Length=775, Percent_Identity=23.741935483871, Blast_Score=139, Evalue=1e-32, Organism=Escherichia coli, GI1789246, Length=805, Percent_Identity=26.2111801242236, Blast_Score=221, Evalue=2e-58, Organism=Escherichia coli, GI1789230, Length=766, Percent_Identity=28.4595300261097, Blast_Score=216, Evalue=6e-57, Organism=Escherichia coli, GI1786478, Length=730, Percent_Identity=26.8493150684932, Blast_Score=119, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17540638, Length=790, Percent_Identity=25.1898734177215, Blast_Score=149, Evalue=6e-36, Organism=Caenorhabditis elegans, GI17539860, Length=773, Percent_Identity=23.9327296248383, Blast_Score=139, Evalue=4e-33, Organism=Caenorhabditis elegans, GI32566215, Length=587, Percent_Identity=25.5536626916525, Blast_Score=130, Evalue=2e-30, Organism=Drosophila melanogaster, GI17737937, Length=719, Percent_Identity=24.6175243393602, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI24647193, Length=714, Percent_Identity=23.3893557422969, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI24647199, Length=703, Percent_Identity=21.9061166429587, Blast_Score=96, Evalue=8e-20, Organism=Drosophila melanogaster, GI24647201, Length=686, Percent_Identity=22.1574344023324, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647195, Length=556, Percent_Identity=23.9208633093525, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI24647197, Length=330, Percent_Identity=28.4848484848485, Blast_Score=75, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 81556; Mature: 81425
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPVKFGIGQSVRRKEDDAFIRGKGRYTDDHAPPDALHALMLRSPHAHAAYRIDVSRACR CCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHCC LPGVALILTATDVADLGGLPCQVELPDQPFIAPPYPILPKDEVRHVGDAIAFVVADTVER CCCEEEEEEECCHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ARDALEAIEVEWTPLASVVGVADAVRDGAPQVWPDHAGNVLFDVSLGDRKAADAAFAAAD HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH AVAEISIVNPRVVTNYMETRAAVCVYDARRDHLTLTVGSQGSHRLREILCENVLGIPLEK HHHEEEECCCHHHHHHHHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHH MRVICPDVGGGFGTKLFPYREYALIAVAAKKLHTAIRWTAERSDHFVGDSQGRDNVTTAR HEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEE MALAGDGRFLGMDVDLMGDMGAYLSTFGPDIPYSGAGMLPGLYDIQAFHCRVRAVFTNTV EEEECCCEEEEEEHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEECCC PVDAYRGAGRPEAAYVVERLVDAAARKIGMTPDAIRRKNFIPPEAMPYRTATGKIYDSGD CCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCH FAAHMARAMEIAKWREFAGRAEAAKERGLVRGIGLATYVEVCGTMGRERADVRLDANGDV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCE TVLIGTQSTGQGHATAYAQIIADQFGIPPERVHMKQGDTDVVTTGLGTGGSSSIPSGGVS EEEEECCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCCCEEEECCCCCCCCCCCCCCCH VERATRKLGVRLREIASEALETSAADLEISDGSIRIAGTDRFVSFADLAKRADLSKLTAD HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCHHHHHHHHHHHCCHHHHHCC ESFSSADGTYPNGTHVVEVEIDPATGKIELVNYVVVDDFGVTLNPLLLAGQVHGGAMQGI CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCHHHHHH GQALMEQTVYDADGQLVTGTLMDYAVPRAADGVSITFETRNVPCATNPLGIKGAGEAGAI HHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC GSCPAVVNAIIDGLWREYGIDHIDMPATPERVWTAIRDAQRRL CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure APVKFGIGQSVRRKEDDAFIRGKGRYTDDHAPPDALHALMLRSPHAHAAYRIDVSRACR CCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEHHHHCC LPGVALILTATDVADLGGLPCQVELPDQPFIAPPYPILPKDEVRHVGDAIAFVVADTVER CCCEEEEEEECCHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ARDALEAIEVEWTPLASVVGVADAVRDGAPQVWPDHAGNVLFDVSLGDRKAADAAFAAAD HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH AVAEISIVNPRVVTNYMETRAAVCVYDARRDHLTLTVGSQGSHRLREILCENVLGIPLEK HHHEEEECCCHHHHHHHHHCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHH MRVICPDVGGGFGTKLFPYREYALIAVAAKKLHTAIRWTAERSDHFVGDSQGRDNVTTAR HEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCEEEE MALAGDGRFLGMDVDLMGDMGAYLSTFGPDIPYSGAGMLPGLYDIQAFHCRVRAVFTNTV EEEECCCEEEEEEHHHHCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEECCC PVDAYRGAGRPEAAYVVERLVDAAARKIGMTPDAIRRKNFIPPEAMPYRTATGKIYDSGD CCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCEEEECCH FAAHMARAMEIAKWREFAGRAEAAKERGLVRGIGLATYVEVCGTMGRERADVRLDANGDV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCE TVLIGTQSTGQGHATAYAQIIADQFGIPPERVHMKQGDTDVVTTGLGTGGSSSIPSGGVS EEEEECCCCCCCHHHHHHHHHHHHHCCCHHHEEECCCCCCEEEECCCCCCCCCCCCCCCH VERATRKLGVRLREIASEALETSAADLEISDGSIRIAGTDRFVSFADLAKRADLSKLTAD HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEEEECCHHHHHHHHHHHCCHHHHHCC ESFSSADGTYPNGTHVVEVEIDPATGKIELVNYVVVDDFGVTLNPLLLAGQVHGGAMQGI CCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCEEEEEECCCHHHHHH GQALMEQTVYDADGQLVTGTLMDYAVPRAADGVSITFETRNVPCATNPLGIKGAGEAGAI HHHHHHHHHCCCCCCEEEHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC GSCPAVVNAIIDGLWREYGIDHIDMPATPERVWTAIRDAQRRL CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]