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The map label for this gene is degT [H]

Identifier: 75675270

GI number: 75675270

Start: 1180075

End: 1181223

Strand: Direct

Name: degT [H]

Synonym: Nwi_1077

Alternate gene names: 75675270

Gene position: 1180075-1181223 (Clockwise)

Preceding gene: 75675269

Following gene: 75675271

Centisome position: 34.69

GC content: 63.1

Gene sequence:

>1149_bases
ATGCAGCAACACATGCCTTCACCGGCGATTTCATTCATCGACATCGCCGAACAGCGCCGTCGTCTCGGCAAAAAAATTGA
CGACGCCATAGCGGGTGTGCTGACGCATTGTCAGTTCATCAACGGTCCGGAGGTCGCGCGTCTGGAGGCCGATCTTGCGG
CCTTCAGCGGCGCGAAGCATGTGGTGGCCTGCGCGAGCGGCACCGATGCGCTGCTGATGGTGTTGCTGGCGAAGAAAGTC
GGCCCCGGCGATGCGGTGATCTGTCCGACATTTACGTTCTGCGCGACCGGCGAGGTCGTGGCGCTGCTCGGGGCGACACC
CGTGTTCGTCGATGTCGATGAGACAACCTTCAATATCGATATCGCTTCGCTCAAGAACGGCATCGCCGTCGCGAGAAGCC
AGGGTCTCAGACCCCGGGCCATTATTCCGGTCGATCTGTTCGGCCAGCCCGCGGATCATGATGCGGTCGCGGCGGTCGCC
GCGGCCGAGGGGCTGTTTGTTCTGGACGACGCCGCGCAGGGTTTTGGCGCGAGCTACAAAGGGCAGCGGCTGGGCAGGTT
CGGGCTTGCGACCGCGACCAGTTTCTTCCCCGCCAAGCCGCTGGGCTGCTACGGCGACGGCGGCGCGATCTTCACCGACG
ATACTGATTTGGCCGAAACGTTGCGCAGCGTTCGCGTGCATGGTCAGGGGGCCGACAAGTACGATAACGTGCGGCTGGGT
CTCACGGGCCGCATCGATACCATGCAGGCGGCGGTCCTGATCGAAAAGCTCAAGATATTTCCTGAGGAGATCGCAGCGCG
GGATGCGGTTGCCAGGCGCTACAATGAAGGGCTCGGGCAGGTTGCGATCGTTCCTCGCGTGGCGCCGGATCGCACCTCGG
TATGGGCGCAGTATACGATCCGGGCGCCGAACGGGCGACGCGACGCGCTGGCGTCGGCGCTGAAGGCGCAGGGCATTCCG
ACCGCGATCTATTATTTGAGGTCGCTGCATCAACAGACCGCTTACCGGAGTTTCCCGGTCGCAGGCGGGGGTCTTGCAGT
CAGCGAAAGGCTTTCGACCGAAGTGATCAGCCTGCCGATGCACCCCTATCTCGATGAATCAACTCAAGGCCGGATCATCG
AGGCCGTGCGCGCCGCGCTTGCGAGCTGA

Upstream 100 bases:

>100_bases
CAGCCTCGAGATCGCGATCAAGTGCCTCCAGGATGAGCCTCCCGTCGCTCCGCCGGTGGAGACGGCGCGCCGCGCCGCCG
GTTGATCATCCGGAGGACAG

Downstream 100 bases:

>100_bases
TTTCGGCATTTTGCGCGGCAGGGCTATCCTGTAGAAACGCCGGATGCTTGGGCGCATTTTCACCGTCGGCGGATATACGT
TGCTCTCGCGGCTCACGGGG

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MQQHMPSPAISFIDIAEQRRRLGKKIDDAIAGVLTHCQFINGPEVARLEADLAAFSGAKHVVACASGTDALLMVLLAKKV
GPGDAVICPTFTFCATGEVVALLGATPVFVDVDETTFNIDIASLKNGIAVARSQGLRPRAIIPVDLFGQPADHDAVAAVA
AAEGLFVLDDAAQGFGASYKGQRLGRFGLATATSFFPAKPLGCYGDGGAIFTDDTDLAETLRSVRVHGQGADKYDNVRLG
LTGRIDTMQAAVLIEKLKIFPEEIAARDAVARRYNEGLGQVAIVPRVAPDRTSVWAQYTIRAPNGRRDALASALKAQGIP
TAIYYLRSLHQQTAYRSFPVAGGGLAVSERLSTEVISLPMHPYLDESTQGRIIEAVRAALAS

Sequences:

>Translated_382_residues
MQQHMPSPAISFIDIAEQRRRLGKKIDDAIAGVLTHCQFINGPEVARLEADLAAFSGAKHVVACASGTDALLMVLLAKKV
GPGDAVICPTFTFCATGEVVALLGATPVFVDVDETTFNIDIASLKNGIAVARSQGLRPRAIIPVDLFGQPADHDAVAAVA
AAEGLFVLDDAAQGFGASYKGQRLGRFGLATATSFFPAKPLGCYGDGGAIFTDDTDLAETLRSVRVHGQGADKYDNVRLG
LTGRIDTMQAAVLIEKLKIFPEEIAARDAVARRYNEGLGQVAIVPRVAPDRTSVWAQYTIRAPNGRRDALASALKAQGIP
TAIYYLRSLHQQTAYRSFPVAGGGLAVSERLSTEVISLPMHPYLDESTQGRIIEAVRAALAS
>Mature_382_residues
MQQHMPSPAISFIDIAEQRRRLGKKIDDAIAGVLTHCQFINGPEVARLEADLAAFSGAKHVVACASGTDALLMVLLAKKV
GPGDAVICPTFTFCATGEVVALLGATPVFVDVDETTFNIDIASLKNGIAVARSQGLRPRAIIPVDLFGQPADHDAVAAVA
AAEGLFVLDDAAQGFGASYKGQRLGRFGLATATSFFPAKPLGCYGDGGAIFTDDTDLAETLRSVRVHGQGADKYDNVRLG
LTGRIDTMQAAVLIEKLKIFPEEIAARDAVARRYNEGLGQVAIVPRVAPDRTSVWAQYTIRAPNGRRDALASALKAQGIP
TAIYYLRSLHQQTAYRSFPVAGGGLAVSERLSTEVISLPMHPYLDESTQGRIIEAVRAALAS

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=367, Percent_Identity=32.9700272479564, Blast_Score=164, Evalue=7e-42,
Organism=Escherichia coli, GI2367285, Length=341, Percent_Identity=29.9120234604106, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40514; Mature: 40514

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQHMPSPAISFIDIAEQRRRLGKKIDDAIAGVLTHCQFINGPEVARLEADLAAFSGAKH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCE
VVACASGTDALLMVLLAKKVGPGDAVICPTFTFCATGEVVALLGATPVFVDVDETTFNID
EEEECCCHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCEEEEECCCEEEEEECCCEEEEE
IASLKNGIAVARSQGLRPRAIIPVDLFGQPADHDAVAAVAAAEGLFVLDDAAQGFGASYK
HHHHHCCHHHHHHCCCCCCEEEEHHCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCC
GQRLGRFGLATATSFFPAKPLGCYGDGGAIFTDDTDLAETLRSVRVHGQGADKYDNVRLG
CCCCCCHHHHHHHCCCCCCCCCEECCCCEEEECCHHHHHHHHHHEECCCCCCCCCCEEEE
LTGRIDTMQAAVLIEKLKIFPEEIAARDAVARRYNEGLGQVAIVPRVAPDRTSVWAQYTI
EECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEE
RAPNGRRDALASALKAQGIPTAIYYLRSLHQQTAYRSFPVAGGGLAVSERLSTEVISLPM
ECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCC
HPYLDESTQGRIIEAVRAALAS
CCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MQQHMPSPAISFIDIAEQRRRLGKKIDDAIAGVLTHCQFINGPEVARLEADLAAFSGAKH
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCE
VVACASGTDALLMVLLAKKVGPGDAVICPTFTFCATGEVVALLGATPVFVDVDETTFNID
EEEECCCHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCEEEEECCCEEEEEECCCEEEEE
IASLKNGIAVARSQGLRPRAIIPVDLFGQPADHDAVAAVAAAEGLFVLDDAAQGFGASYK
HHHHHCCHHHHHHCCCCCCEEEEHHCCCCCCCCHHHHHHHHHCCEEEEECCCCCCCCCCC
GQRLGRFGLATATSFFPAKPLGCYGDGGAIFTDDTDLAETLRSVRVHGQGADKYDNVRLG
CCCCCCHHHHHHHCCCCCCCCCEECCCCEEEECCHHHHHHHHHHEECCCCCCCCCCEEEE
LTGRIDTMQAAVLIEKLKIFPEEIAARDAVARRYNEGLGQVAIVPRVAPDRTSVWAQYTI
EECCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEEE
RAPNGRRDALASALKAQGIPTAIYYLRSLHQQTAYRSFPVAGGGLAVSERLSTEVISLPM
ECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEECCC
HPYLDESTQGRIIEAVRAALAS
CCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]