| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675228
Identifier: 75675228
GI number: 75675228
Start: 1128675
End: 1129499
Strand: Direct
Name: 75675228
Synonym: Nwi_1035
Alternate gene names: NA
Gene position: 1128675-1129499 (Clockwise)
Preceding gene: 75675225
Following gene: 75675230
Centisome position: 33.18
GC content: 56.85
Gene sequence:
>825_bases ATGTCCTATGCAACACTGATGGTTTGGGTCAATGTCGATCACGTCTCCAAGAAGTTTGTCGGCGTCGCGGCGAGTCTGGC GGATAAGTTCGACGCCAGATTACTCGGCTTGTCGGCTGTCGCGATTTTCCCACCGTTTGCCGCGCCTGGCATCGTGACTG TCGCGAATGCGGCTGAATTTGATATTGAGAATATGAAAGAAAGCCTCATCGATGCCGGTAGCATCGTTCAGGCCGCGGCC GGAAGCGCCCGCCAGGTTGAATGGCGATCAGCCATCGCATTTCCCACGGAGACATTGATCGGTGAAGCACGCTGTGCTGA TCTGATCGTGGTCGAAGGCGACAAGCTGTCGGGAGATAAGTATCGAAACCTCGATGTCGGTTCTGCAATTCTAGGAGCTG GCCGTCCTTTCCTTGTGGTGCCTGCGGTGGTGGAATCTCTTGCCGCCGAGCATGTCATGATCGGATGGAAGGATACGCGG GAGGCGCGGCGGGCGGTACAGGATGCGTTGCCGTTTCTTCACGAGGCGAAGCGCGTAACTGTCATGGAAATATGCAGGAA GGAGGAGATGGAGACCGCGCGCAATCGTGTCGATGACGTCGTTCGTTATCTCGCGCAGCACAGGATCAAGGCGGAGTCAC GGGTCGAAATACAGACTTCTCGCGGCTCTGCCGCGGAGCAGCTCATCGGATGGGCGCGTGGTGACGGGGTTGATCTTCTG GTCACCGGAGCCTATGGCCATAGCCGTCTCAATGAATGGATGTTCGGTGGCATGACACGCGATCTGCTCAACACGAGCCC GATCTGCTGTCTGATGTCTCATTGA
Upstream 100 bases:
>100_bases GCCCGCGATGAAATCCGTACCGCGAAGCTTGTTTGAATCTTGATTTGGATCAATCGGCCGATGCATGAACATGAGAGACT CTCGCAGAGGAGGGGCTGAT
Downstream 100 bases:
>100_bases CGCAACGAAGTGCCGGACCTGCATCCGTTATGACGGAAGTTCTTTGATCCGCATCGCCTCTGTATTCTCAACAGAAAAAG CAGACGGATGCTTCCGAGGA
Product: universal stress protein UspA
Products: NA
Alternate protein names: UspA Domain Protein; Universal Stress Protein UspA; Universal Stress Protein; Universal Stress Protein Family; Universal Stress Protein Family Protein; Universal Stress Family Protein; Universal Stress Protein UspA Family UspA; UspA Stress Protein; Universal Stress UspA Protein; UspA-Like Protein; Universal Stress Protein UspA Family; Universal Stress Family; Universal Stress Response Protein; Universal Stress Protein Family Domain Protein; Universal Stress Protein UspA-Like
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSYATLMVWVNVDHVSKKFVGVAASLADKFDARLLGLSAVAIFPPFAAPGIVTVANAAEFDIENMKESLIDAGSIVQAAA GSARQVEWRSAIAFPTETLIGEARCADLIVVEGDKLSGDKYRNLDVGSAILGAGRPFLVVPAVVESLAAEHVMIGWKDTR EARRAVQDALPFLHEAKRVTVMEICRKEEMETARNRVDDVVRYLAQHRIKAESRVEIQTSRGSAAEQLIGWARGDGVDLL VTGAYGHSRLNEWMFGGMTRDLLNTSPICCLMSH
Sequences:
>Translated_274_residues MSYATLMVWVNVDHVSKKFVGVAASLADKFDARLLGLSAVAIFPPFAAPGIVTVANAAEFDIENMKESLIDAGSIVQAAA GSARQVEWRSAIAFPTETLIGEARCADLIVVEGDKLSGDKYRNLDVGSAILGAGRPFLVVPAVVESLAAEHVMIGWKDTR EARRAVQDALPFLHEAKRVTVMEICRKEEMETARNRVDDVVRYLAQHRIKAESRVEIQTSRGSAAEQLIGWARGDGVDLL VTGAYGHSRLNEWMFGGMTRDLLNTSPICCLMSH >Mature_273_residues SYATLMVWVNVDHVSKKFVGVAASLADKFDARLLGLSAVAIFPPFAAPGIVTVANAAEFDIENMKESLIDAGSIVQAAAG SARQVEWRSAIAFPTETLIGEARCADLIVVEGDKLSGDKYRNLDVGSAILGAGRPFLVVPAVVESLAAEHVMIGWKDTRE ARRAVQDALPFLHEAKRVTVMEICRKEEMETARNRVDDVVRYLAQHRIKAESRVEIQTSRGSAAEQLIGWARGDGVDLLV TGAYGHSRLNEWMFGGMTRDLLNTSPICCLMSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29827; Mature: 29695
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYATLMVWVNVDHVSKKFVGVAASLADKFDARLLGLSAVAIFPPFAAPGIVTVANAAEF CCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHC DIENMKESLIDAGSIVQAAAGSARQVEWRSAIAFPTETLIGEARCADLIVVEGDKLSGDK CHHHHHHHHHCHHHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHHHCEEEEEECCCCCCCC YRNLDVGSAILGAGRPFLVVPAVVESLAAEHVMIGWKDTREARRAVQDALPFLHEAKRVT CCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCHH VMEICRKEEMETARNRVDDVVRYLAQHRIKAESRVEIQTSRGSAAEQLIGWARGDGVDLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEE VTGAYGHSRLNEWMFGGMTRDLLNTSPICCLMSH EECCCCHHHHHHHHHCCHHHHHHCCCCCEEEECC >Mature Secondary Structure SYATLMVWVNVDHVSKKFVGVAASLADKFDARLLGLSAVAIFPPFAAPGIVTVANAAEF CCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHC DIENMKESLIDAGSIVQAAAGSARQVEWRSAIAFPTETLIGEARCADLIVVEGDKLSGDK CHHHHHHHHHCHHHHHHHHCCCCCEEHHHHHHCCCHHHHHHHHHHCEEEEEECCCCCCCC YRNLDVGSAILGAGRPFLVVPAVVESLAAEHVMIGWKDTREARRAVQDALPFLHEAKRVT CCCCCCCHHHHCCCCCEEEHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHCCHH VMEICRKEEMETARNRVDDVVRYLAQHRIKAESRVEIQTSRGSAAEQLIGWARGDGVDLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCEEEE VTGAYGHSRLNEWMFGGMTRDLLNTSPICCLMSH EECCCCHHHHHHHHHCCHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA