| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675224
Identifier: 75675224
GI number: 75675224
Start: 1126803
End: 1127234
Strand: Direct
Name: 75675224
Synonym: Nwi_1031
Alternate gene names: NA
Gene position: 1126803-1127234 (Clockwise)
Preceding gene: 75675218
Following gene: 75675225
Centisome position: 33.12
GC content: 55.09
Gene sequence:
>432_bases TTGCATCAGTTTCTCGAACAGACAGTCGATCGCTACATGACACGCGATGTCAGGACGGTGTCGTGCGACCTGACGATGGA CAAACTCAACGATCTGTTCGCCAGCGATGATTTCAATGCCTATCCGGTTGTCGATGACCAGCGGGAAGCCATTGGTTTGG TGACAAAGTTCGATTTCCTCAAATGTTTCGCCATCACGCTCAGTTCAGTCGTTCCGCATTATGATGAGCTTATGAGACGA GCCGTTTCCGATGTGATGATCCACGAATTCATCTATGTGGGGCCGACGACTAAGCTGGCGCGGGTGCTGCAGTTGATGGT CGAGCACCGGCTCCGCAGCATTCCCGTTATGGGGGGTGGCCGGAATCTGGTCGGCATCATCTCGCGCGAAGATGTCATGC GCGCGCTGCGGGATTCCACGCGTGGCGACTAG
Upstream 100 bases:
>100_bases AGAACGGTGGTCTGATTGAGAGATCGGGCGCGCGCAGCATGGATTGGCGCGCGCCGACCCGCGCTTGCCGTAGGCTTGAT AATGCTGATCGGGTGACATT
Downstream 100 bases:
>100_bases CCACGCCGTACAGTTCAATCTCGGGCCGACGGCGGTGATCAAGCTCGATACGCAGCGTTTCCTGTTTCGCCGGCCGGGGA GCGCCCCGAGTTCGCGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: CBS Domain Containing Membrane Protein; CBS Domain-Containing Membrane Protein; Signal Transduction Protein; Signal Transduction Protein With CBS Domains
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MHQFLEQTVDRYMTRDVRTVSCDLTMDKLNDLFASDDFNAYPVVDDQREAIGLVTKFDFLKCFAITLSSVVPHYDELMRR AVSDVMIHEFIYVGPTTKLARVLQLMVEHRLRSIPVMGGGRNLVGIISREDVMRALRDSTRGD
Sequences:
>Translated_143_residues MHQFLEQTVDRYMTRDVRTVSCDLTMDKLNDLFASDDFNAYPVVDDQREAIGLVTKFDFLKCFAITLSSVVPHYDELMRR AVSDVMIHEFIYVGPTTKLARVLQLMVEHRLRSIPVMGGGRNLVGIISREDVMRALRDSTRGD >Mature_143_residues MHQFLEQTVDRYMTRDVRTVSCDLTMDKLNDLFASDDFNAYPVVDDQREAIGLVTKFDFLKCFAITLSSVVPHYDELMRR AVSDVMIHEFIYVGPTTKLARVLQLMVEHRLRSIPVMGGGRNLVGIISREDVMRALRDSTRGD
Specific function: Unknown
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16415; Mature: 16415
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHQFLEQTVDRYMTRDVRTVSCDLTMDKLNDLFASDDFNAYPVVDDQREAIGLVTKFDFL CHHHHHHHHHHHHHHCHHHEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH KCFAITLSSVVPHYDELMRRAVSDVMIHEFIYVGPTTKLARVLQLMVEHRLRSIPVMGGG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC RNLVGIISREDVMRALRDSTRGD CCEEEHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MHQFLEQTVDRYMTRDVRTVSCDLTMDKLNDLFASDDFNAYPVVDDQREAIGLVTKFDFL CHHHHHHHHHHHHHHCHHHEECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH KCFAITLSSVVPHYDELMRRAVSDVMIHEFIYVGPTTKLARVLQLMVEHRLRSIPVMGGG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCC RNLVGIISREDVMRALRDSTRGD CCEEEHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA