| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is pntAA [H]
Identifier: 75675188
GI number: 75675188
Start: 1091776
End: 1092906
Strand: Direct
Name: pntAA [H]
Synonym: Nwi_0995
Alternate gene names: 75675188
Gene position: 1091776-1092906 (Clockwise)
Preceding gene: 75675187
Following gene: 75675189
Centisome position: 32.09
GC content: 63.84
Gene sequence:
>1131_bases ATGAAGATTGCCATAGCGAAAGAAATCGATGAGTCGGAACCGCGGGTCGCCGCGTCACCCGATACAGTGAAGAAGTTCAA GGCGCTCGGCGCGGATGTCGCAATCGAGCCGGGCGCCGGAACCAAATCGGGCGTGCCCGATTCGGACTTCACGGCCGCCG GAGCGCTGGTAAGCCCGGAAGCCGTTAAAGACGCCGATATCATCATCAAGGTGAGGCGGCCCGAGGCATCCGAACTGGCG CGCTACAAGCGTGGCGCGCTGGTGATCGCGATCATGGATCCTTACGGCAATGAGGCGGCGCTGAAGAAGATCGCGGATGC CGGCGTATCGGCCTTCGCCATGGAGTTGATGCCGCGAATTACGCGCGCGCAGGTGATGGACGTGCTGTCGAGCCAGGCGA ACCTGGCCGGCTACCGGGCCGTCATCGAGGCGGCCGAGGCGTTCGGCCGCGCCTTTCCAATGATGATGACGGCCGCCGGT ACCGTGCCCGCTGCAAAGGTCTTCGTCATGGGGGTCGGCGTTGCCGGCCTTCAGGCGATCGCCACCGCGCGTCGCCTCGG TGCCGCCGTCACCGCGACGGACGTGCGTCCCGCTACCAAGGAGCAGGTGGAAAGCCTCGGCGCCAAATTCCTTGCTGTCG AGGACGAGGAGTTCAAGAACGCGCAGACCGCTGGCGGCTACGCCAAGGAAATGTCGAAAGAGTATCAGGCCAAGCAGGCG GCGCTCACCGCTGAGCACATCAAGAAGCAGGACATCATCATCACCACGGCGCTGATTCCCGGACGGCCTGCGCCAAGGCT CGTGACGGCGGAGATGGTGCGCTCGATGAAGCCGGGTTCGGTGCTGGTCGATCTCGCGGTCGAGCGAGGCGGTAACATCG AGGGCGTCCAGGCGGGGAAGGTCGTCGATCTCAACGGCGTGAAGATCATCGGCTTTACCAATGTCGCCGGCCGCGTCGCG GCCTCGGCGTCCAGCCTGTATGCCCGCAACCTGTTTTCCTTCATCGAAACGCTGGTCGACAAGACGACCAAGGCGCTGGC GGTGAACTGGGACGACGAACTGGTCAAGGCTACCGCGCTGACCCGGGATGGCGCGGTCATTCATCCGAACTTCCAGCCGA AAAGCGCATGA
Upstream 100 bases:
>100_bases CCTGATTGTCAGTTCGTCGTTCCGGCCGTCCTGGATTTCCGCTCGCTAGCAATGTGGGTGGTGCTTTAGTCATGCGTGGC CGTCGGCTGCGGGAGGCATC
Downstream 100 bases:
>100_bases CGATCATGAGCCCAGCCGGTCAGCGGATTGTTCCGGACAGCACGACGCGCGCGTTGATTTGCGGATTTGCCGGTCACGCG TCTCGCACGCCCGGAAACGA
Product: alanine dehydrogenase/PNT
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Proton-translocating transhydrogenase component 1; Pyridine nucleotide transhydrogenase subunit alpha 1; dI [H]
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKIAIAKEIDESEPRVAASPDTVKKFKALGADVAIEPGAGTKSGVPDSDFTAAGALVSPEAVKDADIIIKVRRPEASELA RYKRGALVIAIMDPYGNEAALKKIADAGVSAFAMELMPRITRAQVMDVLSSQANLAGYRAVIEAAEAFGRAFPMMMTAAG TVPAAKVFVMGVGVAGLQAIATARRLGAAVTATDVRPATKEQVESLGAKFLAVEDEEFKNAQTAGGYAKEMSKEYQAKQA ALTAEHIKKQDIIITTALIPGRPAPRLVTAEMVRSMKPGSVLVDLAVERGGNIEGVQAGKVVDLNGVKIIGFTNVAGRVA ASASSLYARNLFSFIETLVDKTTKALAVNWDDELVKATALTRDGAVIHPNFQPKSA
Sequences:
>Translated_376_residues MKIAIAKEIDESEPRVAASPDTVKKFKALGADVAIEPGAGTKSGVPDSDFTAAGALVSPEAVKDADIIIKVRRPEASELA RYKRGALVIAIMDPYGNEAALKKIADAGVSAFAMELMPRITRAQVMDVLSSQANLAGYRAVIEAAEAFGRAFPMMMTAAG TVPAAKVFVMGVGVAGLQAIATARRLGAAVTATDVRPATKEQVESLGAKFLAVEDEEFKNAQTAGGYAKEMSKEYQAKQA ALTAEHIKKQDIIITTALIPGRPAPRLVTAEMVRSMKPGSVLVDLAVERGGNIEGVQAGKVVDLNGVKIIGFTNVAGRVA ASASSLYARNLFSFIETLVDKTTKALAVNWDDELVKATALTRDGAVIHPNFQPKSA >Mature_376_residues MKIAIAKEIDESEPRVAASPDTVKKFKALGADVAIEPGAGTKSGVPDSDFTAAGALVSPEAVKDADIIIKVRRPEASELA RYKRGALVIAIMDPYGNEAALKKIADAGVSAFAMELMPRITRAQVMDVLSSQANLAGYRAVIEAAEAFGRAFPMMMTAAG TVPAAKVFVMGVGVAGLQAIATARRLGAAVTATDVRPATKEQVESLGAKFLAVEDEEFKNAQTAGGYAKEMSKEYQAKQA ALTAEHIKKQDIIITTALIPGRPAPRLVTAEMVRSMKPGSVLVDLAVERGGNIEGVQAGKVVDLNGVKIIGFTNVAGRVA ASASSLYARNLFSFIETLVDKTTKALAVNWDDELVKATALTRDGAVIHPNFQPKSA
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=389, Percent_Identity=39.8457583547558, Blast_Score=252, Evalue=4e-67, Organism=Homo sapiens, GI122939153, Length=389, Percent_Identity=39.8457583547558, Blast_Score=252, Evalue=4e-67, Organism=Escherichia coli, GI1787887, Length=371, Percent_Identity=45.0134770889488, Blast_Score=301, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17550456, Length=366, Percent_Identity=48.0874316939891, Blast_Score=311, Evalue=3e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 39480; Mature: 39480
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIAKEIDESEPRVAASPDTVKKFKALGADVAIEPGAGTKSGVPDSDFTAAGALVSPE CCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEECCH AVKDADIIIKVRRPEASELARYKRGALVIAIMDPYGNEAALKKIADAGVSAFAMELMPRI HHCCCEEEEEECCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHH TRAQVMDVLSSQANLAGYRAVIEAAEAFGRAFPMMMTAAGTVPAAKVFVMGVGVAGLQAI HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCHHHHHHH ATARRLGAAVTATDVRPATKEQVESLGAKFLAVEDEEFKNAQTAGGYAKEMSKEYQAKQA HHHHHHCCEEEECCCCCCHHHHHHHCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHH ALTAEHIKKQDIIITTALIPGRPAPRLVTAEMVRSMKPGSVLVDLAVERGGNIEGVQAGK HHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC VVDLNGVKIIGFTNVAGRVAASASSLYARNLFSFIETLVDKTTKALAVNWDDELVKATAL EEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHE TRDGAVIHPNFQPKSA ECCCCEECCCCCCCCC >Mature Secondary Structure MKIAIAKEIDESEPRVAASPDTVKKFKALGADVAIEPGAGTKSGVPDSDFTAAGALVSPE CCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCEECCH AVKDADIIIKVRRPEASELARYKRGALVIAIMDPYGNEAALKKIADAGVSAFAMELMPRI HHCCCEEEEEECCCCHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHH TRAQVMDVLSSQANLAGYRAVIEAAEAFGRAFPMMMTAAGTVPAAKVFVMGVGVAGLQAI HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEECCHHHHHHH ATARRLGAAVTATDVRPATKEQVESLGAKFLAVEDEEFKNAQTAGGYAKEMSKEYQAKQA HHHHHHCCEEEECCCCCCHHHHHHHCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHH ALTAEHIKKQDIIITTALIPGRPAPRLVTAEMVRSMKPGSVLVDLAVERGGNIEGVQAGK HHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCC VVDLNGVKIIGFTNVAGRVAASASSLYARNLFSFIETLVDKTTKALAVNWDDELVKATAL EEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHE TRDGAVIHPNFQPKSA ECCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]