Click here to switch to the map view.

The map label for this gene is 75675177

Identifier: 75675177

GI number: 75675177

Start: 1078278

End: 1078943

Strand: Direct

Name: 75675177

Synonym: Nwi_0984

Alternate gene names: NA

Gene position: 1078278-1078943 (Clockwise)

Preceding gene: 75675176

Following gene: 75675181

Centisome position: 31.69

GC content: 62.16

Gene sequence:

>666_bases
ATGCAACCGACAACCTCCTCGGCCGGGCGGCTTTGTCTGCCAATGCTGTTCGTCCTCGCTGGGACTCTGGCGCCAACTCT
CGTGTCCGCGCAGTCGTCATCGCGCAGCCCTCCGCAGGCTACGCCGCCTGAGGCCACCCAGCCCAGCGATCCGCCACGGA
CGCTGCCGAGAAGTCCGAAAGAGAGGGGTCGCGGTCTCGATTTCCTGTTCGGCGCCCTCAAGGCCGCGCCGGATGAGGCG
AGTGCGAGGCATGTCGAGTCGCGGATCCTGACGCTTTGGAGCCAAACCTCAAGCGACACGATCTCGCTTTTGATGCAACG
CGTGAAGACAGCGACGGACGCCAAACAAAGCGACGTCGCGCTCAAACTGCTTGATGCGGTTTTGAAGCTGCGTCCCGAAT
ACATCGAGGGATGGAGCCGGCGCGCGACTTTGCACTATGTGCGCAACGACTATCAGCGTTCGCTAGAGGATATCGAGCAG
GTGCTGATCCGCGAGCCGCGCCACTTTGGAGCGCTGGCGGGTCTCGGCGTGATCATGCAGGAGCTTGGCGATGACAAGCG
CGCGCTTGACGCTTTCCGCAAGGCGCTCGCGGTCAATCCCCATCTCGAGAGAGTGCGGGAGCTGGTCAAAACCCTGACTG
AAAAAGTCGAAGGCCGCGATATCTGA

Upstream 100 bases:

>100_bases
CCAGGTCCTGTCGGATTGACGCCGGGCGGGATCGATTCGTGGAACGGAGAGCCGCTGTCGTGTAAGCTCCGGAAGCTCGC
ATGATGTCCGGAGCTTCTGA

Downstream 100 bases:

>100_bases
CCGACGATGAGAGAGTAATCCGCAACGGCCGCGCGTTCACGTTCACGATCCTCGGTCATTTCGATTCAAGGTCATCCTGA
TCCAAGGCATTATCGCTTTT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MQPTTSSAGRLCLPMLFVLAGTLAPTLVSAQSSSRSPPQATPPEATQPSDPPRTLPRSPKERGRGLDFLFGALKAAPDEA
SARHVESRILTLWSQTSSDTISLLMQRVKTATDAKQSDVALKLLDAVLKLRPEYIEGWSRRATLHYVRNDYQRSLEDIEQ
VLIREPRHFGALAGLGVIMQELGDDKRALDAFRKALAVNPHLERVRELVKTLTEKVEGRDI

Sequences:

>Translated_221_residues
MQPTTSSAGRLCLPMLFVLAGTLAPTLVSAQSSSRSPPQATPPEATQPSDPPRTLPRSPKERGRGLDFLFGALKAAPDEA
SARHVESRILTLWSQTSSDTISLLMQRVKTATDAKQSDVALKLLDAVLKLRPEYIEGWSRRATLHYVRNDYQRSLEDIEQ
VLIREPRHFGALAGLGVIMQELGDDKRALDAFRKALAVNPHLERVRELVKTLTEKVEGRDI
>Mature_221_residues
MQPTTSSAGRLCLPMLFVLAGTLAPTLVSAQSSSRSPPQATPPEATQPSDPPRTLPRSPKERGRGLDFLFGALKAAPDEA
SARHVESRILTLWSQTSSDTISLLMQRVKTATDAKQSDVALKLLDAVLKLRPEYIEGWSRRATLHYVRNDYQRSLEDIEQ
VLIREPRHFGALAGLGVIMQELGDDKRALDAFRKALAVNPHLERVRELVKTLTEKVEGRDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24472; Mature: 24472

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTTSSAGRLCLPMLFVLAGTLAPTLVSAQSSSRSPPQATPPEATQPSDPPRTLPRSPK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ERGRGLDFLFGALKAAPDEASARHVESRILTLWSQTSSDTISLLMQRVKTATDAKQSDVA
HHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
LKLLDAVLKLRPEYIEGWSRRATLHYVRNDYQRSLEDIEQVLIREPRHFGALAGLGVIMQ
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ELGDDKRALDAFRKALAVNPHLERVRELVKTLTEKVEGRDI
HHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQPTTSSAGRLCLPMLFVLAGTLAPTLVSAQSSSRSPPQATPPEATQPSDPPRTLPRSPK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
ERGRGLDFLFGALKAAPDEASARHVESRILTLWSQTSSDTISLLMQRVKTATDAKQSDVA
HHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHH
LKLLDAVLKLRPEYIEGWSRRATLHYVRNDYQRSLEDIEQVLIREPRHFGALAGLGVIMQ
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ELGDDKRALDAFRKALAVNPHLERVRELVKTLTEKVEGRDI
HHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA