| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is msrA
Identifier: 75675164
GI number: 75675164
Start: 1068251
End: 1068790
Strand: Direct
Name: msrA
Synonym: Nwi_0971
Alternate gene names: 75675164
Gene position: 1068251-1068790 (Clockwise)
Preceding gene: 75675162
Following gene: 75675165
Centisome position: 31.4
GC content: 62.78
Gene sequence:
>540_bases ATGACGGTTTCTACGGAACGTGCGGTTCTTGCCGGCGGTTGCTTCTGGGGTATGCAGGCTCTGTTGCGCCGGTATCCCGG CGTGATCTCCACCCGGGTCGGCTACACCGGCGGCGACGTGCCGGACGCCACGTACCGCAATCACGGCGATCATGCCGAGG CCATCGAAGTCAATTTCGATCCGACGGTGACCAGCTATCGGCAGCTGCTGGAGTTCTTTTTCCAGATTCATGATCCGACC ACGGAGGACCGTCAGGGTTACGATCAGGGCCTAAGCTACCGGTCGGCGATCTTCTACACGAACGAGGAGCAGAAGCGGAT CGCGGAGGAAACCATCGCCGAGATCGACGCGTCCGGTCTTTGGCCCGGCTATGTCGTCACCGATGTCGAGCCGGCCGGAC CATTCTGGGAGGCCGAGCCCGAGCATCAGGATTACCTGGAGCGGGTTCCGAACGGTTACACCTGCCATTTCGTCCGGCCG AACTGGAAGCTGCCACGCAAGCAGGACGCCGGTCAGACGGCGGCCGGCGGGGATCGCTGA
Upstream 100 bases:
>100_bases GGATGGATGCCCCGGTTGGCGTGAAGAAACGCGTCAGAACAACAATCTGGAGCTTCGCTCCTAATTCTGTCAGAAGCGAA GCTCCAGGAGAGAGGTGGGT
Downstream 100 bases:
>100_bases AGGCGTTGGAACCGCCGATTTGCGGGCCTAGGCCGGATCGACATTCAGGATTCCCAGGCGGTCTGATCGCTGATTCATAG GGTTCCGTGATTCTGACACG
Product: methionine sulfoxide reductase A
Products: NA
Alternate protein names: Protein-methionine-S-oxide reductase; Peptide-methionine (S)-S-oxide reductase; Peptide Met(O) reductase
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTVSTERAVLAGGCFWGMQALLRRYPGVISTRVGYTGGDVPDATYRNHGDHAEAIEVNFDPTVTSYRQLLEFFFQIHDPT TEDRQGYDQGLSYRSAIFYTNEEQKRIAEETIAEIDASGLWPGYVVTDVEPAGPFWEAEPEHQDYLERVPNGYTCHFVRP NWKLPRKQDAGQTAAGGDR
Sequences:
>Translated_179_residues MTVSTERAVLAGGCFWGMQALLRRYPGVISTRVGYTGGDVPDATYRNHGDHAEAIEVNFDPTVTSYRQLLEFFFQIHDPT TEDRQGYDQGLSYRSAIFYTNEEQKRIAEETIAEIDASGLWPGYVVTDVEPAGPFWEAEPEHQDYLERVPNGYTCHFVRP NWKLPRKQDAGQTAAGGDR >Mature_178_residues TVSTERAVLAGGCFWGMQALLRRYPGVISTRVGYTGGDVPDATYRNHGDHAEAIEVNFDPTVTSYRQLLEFFFQIHDPTT EDRQGYDQGLSYRSAIFYTNEEQKRIAEETIAEIDASGLWPGYVVTDVEPAGPFWEAEPEHQDYLERVPNGYTCHFVRPN WKLPRKQDAGQTAAGGDR
Specific function: Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
COG id: COG0225
COG function: function code O; Peptide methionine sulfoxide reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the msrA Met sulfoxide reductase family
Homologues:
Organism=Homo sapiens, GI208609995, Length=158, Percent_Identity=37.9746835443038, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI6912516, Length=157, Percent_Identity=38.2165605095541, Blast_Score=101, Evalue=3e-22, Organism=Homo sapiens, GI208609993, Length=107, Percent_Identity=39.2523364485981, Blast_Score=74, Evalue=1e-13, Organism=Escherichia coli, GI1790665, Length=152, Percent_Identity=44.078947368421, Blast_Score=122, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17533973, Length=143, Percent_Identity=40.5594405594406, Blast_Score=107, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6320881, Length=166, Percent_Identity=37.3493975903614, Blast_Score=109, Evalue=3e-25, Organism=Drosophila melanogaster, GI24664627, Length=148, Percent_Identity=36.4864864864865, Blast_Score=95, Evalue=3e-20, Organism=Drosophila melanogaster, GI45553131, Length=136, Percent_Identity=38.2352941176471, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24664631, Length=150, Percent_Identity=35.3333333333333, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MSRA_NITWN (Q3SU08)
Other databases:
- EMBL: CP000115 - RefSeq: YP_317585.1 - ProteinModelPortal: Q3SU08 - SMR: Q3SU08 - STRING: Q3SU08 - GeneID: 3675007 - GenomeReviews: CP000115_GR - KEGG: nwi:Nwi_0971 - NMPDR: fig|323098.3.peg.539 - eggNOG: COG0225 - HOGENOM: HBG748152 - OMA: VPNATYR - PhylomeDB: Q3SU08 - ProtClustDB: PRK14054 - BioCyc: NWIN323098:NWI_0971-MONOMER - HAMAP: MF_01401 - InterPro: IPR002569 - Gene3D: G3DSA:3.30.1060.10 - TIGRFAMs: TIGR00401
Pfam domain/function: PF01625 PMSR; SSF55068 MsrA
EC number: =1.8.4.11
Molecular weight: Translated: 20225; Mature: 20094
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: ACT_SITE 14-14
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSTERAVLAGGCFWGMQALLRRYPGVISTRVGYTGGDVPDATYRNHGDHAEAIEVNFD CCCCCCCHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC PTVTSYRQLLEFFFQIHDPTTEDRQGYDQGLSYRSAIFYTNEEQKRIAEETIAEIDASGL CCHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCC WPGYVVTDVEPAGPFWEAEPEHQDYLERVPNGYTCHFVRPNWKLPRKQDAGQTAAGGDR CCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVSTERAVLAGGCFWGMQALLRRYPGVISTRVGYTGGDVPDATYRNHGDHAEAIEVNFD CCCCCCHHHCCHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC PTVTSYRQLLEFFFQIHDPTTEDRQGYDQGLSYRSAIFYTNEEQKRIAEETIAEIDASGL CCHHHHHHHHHHHHHHCCCCCCHHCCHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCC WPGYVVTDVEPAGPFWEAEPEHQDYLERVPNGYTCHFVRPNWKLPRKQDAGQTAAGGDR CCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA