| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is 75675147
Identifier: 75675147
GI number: 75675147
Start: 1047904
End: 1048620
Strand: Direct
Name: 75675147
Synonym: Nwi_0954
Alternate gene names: NA
Gene position: 1047904-1048620 (Clockwise)
Preceding gene: 75675145
Following gene: 75675152
Centisome position: 30.8
GC content: 60.39
Gene sequence:
>717_bases TTGGGGCACAGTCGGATATCACGCTTGAAGAAGTCCGGGTCCTGCTGCGCGAGCGCGGCATTACGGTCAGCGTGGCAACG GTGTGGAGCTTCTACGACCGGCGCGGCATCAGCTTCAAAAAAAAGCGTTTACGCGACCGAGCAGGATCGGCCCGACGTGG CGATGGCCCGCGAGGTCTGGAAAGCGCAACAAGGGCTGCTTGATCCAGCCCGCCTCGTCTTCATCGATGAGACCGGCACC TCGACCAACATGGCGCGATTGCGTGGCCGCTGCCGCCGTGGCCAACGCCTGGTCGGCAAGATTCCACACGGTCACTGGAA GATCACCACCTTCGTCGCGGCACTGCGCCACGACGCTATCACCGCTCCCTTTGTCATCAACGAGCCGATGAATGGCGAGA TCTTTCGCGTCTACCTGCAACGATGCCTGGTCCCGACCCTGAAGCCAGGCGACATCGTGGTGATGGACAATCTGCCCGCC CACAAGAACGACGATGTTCGACAAATCATCGAGGCCGCTGGCGCGCAGTTGCGCTATCTGCCGCCGTACTCGCCCGACCT CAACCCGATCGAGATGGCGTTCGCAAAGCTCAAGGCCCATCTGCGAAAGGCCGCCGAGCGATCGATCCCCGCACTCTGGA ACAGGATCGGTTCTATCCTCGATCTCTTCTCTCCAGACCAATGCATCAACTTCTTCAATCACGCCGGTTATGCGTAA
Upstream 100 bases:
>100_bases GTCCGTCAGTGGCGGCTTGACGGACGAACGGCGCCGAGCGGCCTTCGCGGTCATCGTCGCGCGGTTCTTGAGCCGCATGC CGCGTGGCTGCTCGACCTGA
Downstream 100 bases:
>100_bases TCTCAATCCAAAATGGCTCTAAGTCGATGAACTTCGCGGTCCACCGCCGGGCGGAACGGCTCCATCAGGTCATCGACCAG GACAAGCGCATTGCCTCGGT
Product: ISRm2011-2 transposase protein
Products: NA
Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase And Inactivated Derivative; Transposase For Insertion Sequence Element; ISHde6 Transposase OrfB; ISHde5 Transposase OrfA; Transposase IS; ISRin2 Transposase OrfB; Transposase Fragment
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MGHSRISRLKKSGSCCASAALRSAWQRCGASTTGAASASKKSVYATEQDRPDVAMAREVWKAQQGLLDPARLVFIDETGT STNMARLRGRCRRGQRLVGKIPHGHWKITTFVAALRHDAITAPFVINEPMNGEIFRVYLQRCLVPTLKPGDIVVMDNLPA HKNDDVRQIIEAAGAQLRYLPPYSPDLNPIEMAFAKLKAHLRKAAERSIPALWNRIGSILDLFSPDQCINFFNHAGYA
Sequences:
>Translated_238_residues MGHSRISRLKKSGSCCASAALRSAWQRCGASTTGAASASKKSVYATEQDRPDVAMAREVWKAQQGLLDPARLVFIDETGT STNMARLRGRCRRGQRLVGKIPHGHWKITTFVAALRHDAITAPFVINEPMNGEIFRVYLQRCLVPTLKPGDIVVMDNLPA HKNDDVRQIIEAAGAQLRYLPPYSPDLNPIEMAFAKLKAHLRKAAERSIPALWNRIGSILDLFSPDQCINFFNHAGYA >Mature_237_residues GHSRISRLKKSGSCCASAALRSAWQRCGASTTGAASASKKSVYATEQDRPDVAMAREVWKAQQGLLDPARLVFIDETGTS TNMARLRGRCRRGQRLVGKIPHGHWKITTFVAALRHDAITAPFVINEPMNGEIFRVYLQRCLVPTLKPGDIVVMDNLPAH KNDDVRQIIEAAGAQLRYLPPYSPDLNPIEMAFAKLKAHLRKAAERSIPALWNRIGSILDLFSPDQCINFFNHAGYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26350; Mature: 26219
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHSRISRLKKSGSCCASAALRSAWQRCGASTTGAASASKKSVYATEQDRPDVAMAREVW CCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHH KAQQGLLDPARLVFIDETGTSTNMARLRGRCRRGQRLVGKIPHGHWKITTFVAALRHDAI HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCC TAPFVINEPMNGEIFRVYLQRCLVPTLKPGDIVVMDNLPAHKNDDVRQIIEAAGAQLRYL CCCEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEC PPYSPDLNPIEMAFAKLKAHLRKAAERSIPALWNRIGSILDLFSPDQCINFFNHAGYA CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure GHSRISRLKKSGSCCASAALRSAWQRCGASTTGAASASKKSVYATEQDRPDVAMAREVW CHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHH KAQQGLLDPARLVFIDETGTSTNMARLRGRCRRGQRLVGKIPHGHWKITTFVAALRHDAI HHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCC TAPFVINEPMNGEIFRVYLQRCLVPTLKPGDIVVMDNLPAHKNDDVRQIIEAAGAQLRYL CCCEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHHHHCCCCEEEC PPYSPDLNPIEMAFAKLKAHLRKAAERSIPALWNRIGSILDLFSPDQCINFFNHAGYA CCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA