| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675099
Identifier: 75675099
GI number: 75675099
Start: 986729
End: 987157
Strand: Direct
Name: 75675099
Synonym: Nwi_0906
Alternate gene names: NA
Gene position: 986729-987157 (Clockwise)
Preceding gene: 75675096
Following gene: 75675104
Centisome position: 29.0
GC content: 57.34
Gene sequence:
>429_bases ATGTCAGGTTTGTCAGATGCCGTGAGAGTGATCGAGCCCGGCAAGACCTATGTCGGCAAGCAGGGCTTTACTTACGGAGC CGGGGTATCGAAGGAGACGGTCGGAGCAAAGAACATATGTTTGAATGTGCTGCCGATGCCTCCGGGCGCCAGGGCGAAGG TCCATTACCACGACGGTATCGAGACCATCGCATATCTTTTGGAAGGTGAGTGCGCCGTCTATTACGGTGACAAACTTGAG CATCGTATCGCCGTCAAGGCCGGGGATCATGTCTATATGCCCGAGGACGTGCCGCACGCTCCGTGCAATGAGAGCGGCGC TCCGTGCAAGTGGCTTGTCGCGCATTCATCGGGCAGCGATCAGGACGGCATCGTTCTGCTGCCGGAACTCGATGCCGTTC TGGCGCGGAAGTCGAATATGTCAGCTTGA
Upstream 100 bases:
>100_bases GTTTTCTTCACGCGAACCGGATTCTATCCTTAGGCTCAAGCCCCGAGGACAATGCTTCGCTCGAAAACGCTACAGCGGTT CGTGTGTTTGGGAGATTGCG
Downstream 100 bases:
>100_bases TGATGGGTGAAGGCGCGGAGAGAATCCTCGTGCTGTCTGAATGATGCGCGAAGCCAGCACACGCAAAAGACGTTCATCAC GCTTTCAACGGATATGCTCG
Product: cupin region
Products: NA
Alternate protein names: Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Mannose-6-Phosphate Isomerase; Cupin 2 Barrel; CupinCupin Region; Phospholipase C
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MSGLSDAVRVIEPGKTYVGKQGFTYGAGVSKETVGAKNICLNVLPMPPGARAKVHYHDGIETIAYLLEGECAVYYGDKLE HRIAVKAGDHVYMPEDVPHAPCNESGAPCKWLVAHSSGSDQDGIVLLPELDAVLARKSNMSA
Sequences:
>Translated_142_residues MSGLSDAVRVIEPGKTYVGKQGFTYGAGVSKETVGAKNICLNVLPMPPGARAKVHYHDGIETIAYLLEGECAVYYGDKLE HRIAVKAGDHVYMPEDVPHAPCNESGAPCKWLVAHSSGSDQDGIVLLPELDAVLARKSNMSA >Mature_141_residues SGLSDAVRVIEPGKTYVGKQGFTYGAGVSKETVGAKNICLNVLPMPPGARAKVHYHDGIETIAYLLEGECAVYYGDKLEH RIAVKAGDHVYMPEDVPHAPCNESGAPCKWLVAHSSGSDQDGIVLLPELDAVLARKSNMSA
Specific function: Unknown
COG id: COG4101
COG function: function code G; Predicted mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15123; Mature: 14992
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLSDAVRVIEPGKTYVGKQGFTYGAGVSKETVGAKNICLNVLPMPPGARAKVHYHDGI CCCHHCHHEEECCCCCEECCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCH ETIAYLLEGECAVYYGDKLEHRIAVKAGDHVYMPEDVPHAPCNESGAPCKWLVAHSSGSD HHHHHHHCCCEEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCC QDGIVLLPELDAVLARKSNMSA CCCEEEECCCHHHHHCCCCCCC >Mature Secondary Structure SGLSDAVRVIEPGKTYVGKQGFTYGAGVSKETVGAKNICLNVLPMPPGARAKVHYHDGI CCHHCHHEEECCCCCEECCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCH ETIAYLLEGECAVYYGDKLEHRIAVKAGDHVYMPEDVPHAPCNESGAPCKWLVAHSSGSD HHHHHHHCCCEEEEECCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCC QDGIVLLPELDAVLARKSNMSA CCCEEEECCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA