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The map label for this gene is trbI [H]

Identifier: 75675055

GI number: 75675055

Start: 933407

End: 934615

Strand: Direct

Name: trbI [H]

Synonym: Nwi_0860

Alternate gene names: 75675055

Gene position: 933407-934615 (Clockwise)

Preceding gene: 75675054

Following gene: 75675056

Centisome position: 27.44

GC content: 65.43

Gene sequence:

>1209_bases
ATGACCGACGCACCTAATCCGTCTCCCGGCGATATCCGCGCCGAACTGCGCTTGCGGCCCGAGCAGCCCCGCGTCACGCG
CCTGTCGCGCAAAGTGCTCATCATGCTTGGCGGAGTCAGCGCCGCCGCCATCATGGCCGCGCTGTTCTGGGCGCTTGATG
CCAACCGGCGCGCCAGTCAATCTCCCAATGAACTCTACAACACGGAGAACCGCACACCGGCGGATGGACTTGCTGGCCTG
CCGAAGGACTACACCGGCATCCCAAAGCTCGGCCCGGCGCTGCCGGGCGACCTGGGCCGCCCGATCCTGCACGCGCAGGA
TGAAGGCAAGCCCGTCGTCGCGCCAGATATCCGCACACCGCGCGCCGATCCGGCGGAGCAGCGCCGTCTTGCCGAGATCG
AAGCCGCGCGCGTTGCCAAGGTGTTCACCGACAGTCGCGGTGTGCAGGCGACGGTCGCATCTGCGGCGGCGGTTGGTCGG
ATCGATCCAACCACAGGCCTCACGCTGCCGACCGAAACGCCGCCGCTCGATCCGGGCGCAGCGCAGAACATGCAGGATCG
CAAGCTCTCCTTCGTCAATGCTGCCGTCGATCGCCGCACCGTCACGCCTGACCGCGTGCAGGAGAAGGCGTCGCCCTATG
TCGTGCAGGCCGGCACTGTCATTCCCGCCGCGCTGATTACCGGCATCAAATCCGATCTGCCCGGAACGATCACCGCGCAG
GTGACGGAGCAGGTTTACGACACCCCGACCGGCAAGCAGCTTCTCATTCCGCAGGGCGCACGGCTGATCGGTCAGTACGA
CAGCCAGGTCGCATTCGGGCAGTCGCGCGTCTTGCTCGTCTGGAATCGCATCATCATGCCGAACGGCACGTCGATCGTGC
TGGAGCGGCAGCAGGGCGCCGATGCACAGGGCTATTCCGGGCTCGAGGACGACGTCGACTATCATTGGGGCCAACTCTTC
AAGGCGGCAATCCTCTCGACCTTGCTCGGCGTCGGCACCGAGATCGGCGCCAGCAACAATGAGAACGAGATCGCGCGTGC
GATCCGTCAAAGTAGTCAGGACACCGACTCAGATGTTGGCCGCCAGCTCATCCGCCGCCAGCTCAACATTCAGCCGACGC
TCACCATCCGGCCGGGCTTCCCCGTCCGCGTGATCGTCAATCGCGACCTGATATTGCAGCCCTATGGGGCGGCGAAGGAG
CCGTCATGA

Upstream 100 bases:

>100_bases
TTGCCGCCGCCGAACTGCGCCTGGGTGACAAGGACAGCGAGAAGCGCGTGCGGATCGTGCGCACTGACGGCCGGCCAGGG
CGTGGCCCGAGGTTGTTCTG

Downstream 100 bases:

>100_bases
CCAAGCTCAGGCTCTCGGCGCTCCCCGATGACAAGCCAGTCAAGATCACGGTTAAGCTGCCGGCGGCCATCCACCGCGAT
CTCGTCACCTATGCCGAGAT

Product: conjugation TrbI-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MTDAPNPSPGDIRAELRLRPEQPRVTRLSRKVLIMLGGVSAAAIMAALFWALDANRRASQSPNELYNTENRTPADGLAGL
PKDYTGIPKLGPALPGDLGRPILHAQDEGKPVVAPDIRTPRADPAEQRRLAEIEAARVAKVFTDSRGVQATVASAAAVGR
IDPTTGLTLPTETPPLDPGAAQNMQDRKLSFVNAAVDRRTVTPDRVQEKASPYVVQAGTVIPAALITGIKSDLPGTITAQ
VTEQVYDTPTGKQLLIPQGARLIGQYDSQVAFGQSRVLLVWNRIIMPNGTSIVLERQQGADAQGYSGLEDDVDYHWGQLF
KAAILSTLLGVGTEIGASNNENEIARAIRQSSQDTDSDVGRQLIRRQLNIQPTLTIRPGFPVRVIVNRDLILQPYGAAKE
PS

Sequences:

>Translated_402_residues
MTDAPNPSPGDIRAELRLRPEQPRVTRLSRKVLIMLGGVSAAAIMAALFWALDANRRASQSPNELYNTENRTPADGLAGL
PKDYTGIPKLGPALPGDLGRPILHAQDEGKPVVAPDIRTPRADPAEQRRLAEIEAARVAKVFTDSRGVQATVASAAAVGR
IDPTTGLTLPTETPPLDPGAAQNMQDRKLSFVNAAVDRRTVTPDRVQEKASPYVVQAGTVIPAALITGIKSDLPGTITAQ
VTEQVYDTPTGKQLLIPQGARLIGQYDSQVAFGQSRVLLVWNRIIMPNGTSIVLERQQGADAQGYSGLEDDVDYHWGQLF
KAAILSTLLGVGTEIGASNNENEIARAIRQSSQDTDSDVGRQLIRRQLNIQPTLTIRPGFPVRVIVNRDLILQPYGAAKE
PS
>Mature_401_residues
TDAPNPSPGDIRAELRLRPEQPRVTRLSRKVLIMLGGVSAAAIMAALFWALDANRRASQSPNELYNTENRTPADGLAGLP
KDYTGIPKLGPALPGDLGRPILHAQDEGKPVVAPDIRTPRADPAEQRRLAEIEAARVAKVFTDSRGVQATVASAAAVGRI
DPTTGLTLPTETPPLDPGAAQNMQDRKLSFVNAAVDRRTVTPDRVQEKASPYVVQAGTVIPAALITGIKSDLPGTITAQV
TEQVYDTPTGKQLLIPQGARLIGQYDSQVAFGQSRVLLVWNRIIMPNGTSIVLERQQGADAQGYSGLEDDVDYHWGQLFK
AAILSTLLGVGTEIGASNNENEIARAIRQSSQDTDSDVGRQLIRRQLNIQPTLTIRPGFPVRVIVNRDLILQPYGAAKEP
S

Specific function: Unknown

COG id: COG2948

COG function: function code U; Type IV secretory pathway, VirB10 components

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbI/virB10 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005498 [H]

Pfam domain/function: PF03743 TrbI [H]

EC number: NA

Molecular weight: Translated: 43253; Mature: 43121

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAPNPSPGDIRAELRLRPEQPRVTRLSRKVLIMLGGVSAAAIMAALFWALDANRRASQ
CCCCCCCCCCCEEEEEEECCCCCHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCC
SPNELYNTENRTPADGLAGLPKDYTGIPKLGPALPGDLGRPILHAQDEGKPVVAPDIRTP
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCC
RADPAEQRRLAEIEAARVAKVFTDSRGVQATVASAAAVGRIDPTTGLTLPTETPPLDPGA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
AQNMQDRKLSFVNAAVDRRTVTPDRVQEKASPYVVQAGTVIPAALITGIKSDLPGTITAQ
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHH
VTEQVYDTPTGKQLLIPQGARLIGQYDSQVAFGQSRVLLVWNRIIMPNGTSIVLERQQGA
HHHHHHCCCCCCEEECCCCCHHHHHCCCCEECCCCCEEEEEEEEECCCCCEEEEECCCCC
DAQGYSGLEDDVDYHWGQLFKAAILSTLLGVGTEIGASNNENEIARAIRQSSQDTDSDVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
RQLIRRQLNIQPTLTIRPGFPVRVIVNRDLILQPYGAAKEPS
HHHHHHHCCCCEEEEECCCCCEEEEECCCEEECCCCCCCCCC
>Mature Secondary Structure 
TDAPNPSPGDIRAELRLRPEQPRVTRLSRKVLIMLGGVSAAAIMAALFWALDANRRASQ
CCCCCCCCCCEEEEEEECCCCCHHHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCC
SPNELYNTENRTPADGLAGLPKDYTGIPKLGPALPGDLGRPILHAQDEGKPVVAPDIRTP
CCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCC
RADPAEQRRLAEIEAARVAKVFTDSRGVQATVASAAAVGRIDPTTGLTLPTETPPLDPGA
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
AQNMQDRKLSFVNAAVDRRTVTPDRVQEKASPYVVQAGTVIPAALITGIKSDLPGTITAQ
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCCHHH
VTEQVYDTPTGKQLLIPQGARLIGQYDSQVAFGQSRVLLVWNRIIMPNGTSIVLERQQGA
HHHHHHCCCCCCEEECCCCCHHHHHCCCCEECCCCCEEEEEEEEECCCCCEEEEECCCCC
DAQGYSGLEDDVDYHWGQLFKAAILSTLLGVGTEIGASNNENEIARAIRQSSQDTDSDVG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCHHHHH
RQLIRRQLNIQPTLTIRPGFPVRVIVNRDLILQPYGAAKEPS
HHHHHHHCCCCEEEEECCCCCEEEEECCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8763954 [H]