Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

Click here to switch to the map view.

The map label for this gene is 75675022

Identifier: 75675022

GI number: 75675022

Start: 909250

End: 909540

Strand: Direct

Name: 75675022

Synonym: Nwi_0826

Alternate gene names: NA

Gene position: 909250-909540 (Clockwise)

Preceding gene: 75675021

Following gene: 75675023

Centisome position: 26.73

GC content: 61.86

Gene sequence:

>291_bases
ATGGCCTTCGGTCAAACCGTCCGCTTTCACCGCAATCAAAAGGGCTTCGGCCTGAATGAGTTCGCCGAGCGTCTCGGCGT
CTCGCCTGCCTATTGGAGCCGCGTCGAGCGCGAGCAGGAAAACCCGCCGCGCGACGATCTCGTTGAGCGCGTCGCCGCCA
TCCTTGAAGTGAAGCTCGACGATCTGTTCTGCGAAGCCGGGCGCCTGCCGCCCGATCTTCGCGGCGATATCAAAGCCGTT
GTGACGCTCTATCGACGCAGCCGCGACGCAAGGAATTCCACCAGCAAATGA

Upstream 100 bases:

>100_bases
ACCTCGCCGAAGCGTTCGGCGTGACCGCCGCCTTCATGTCGGTGCGGTTGGCGAAGGGCGGCTTCATCGGTCGGCGCTTT
GAAACCGGGAGCACGCTCTG

Downstream 100 bases:

>100_bases
TGACCATGACCAAATAACGAGTGTTTCGAGATGCCAGCGCCGCCCCGTTCCTTTCTGACCGTTACCGACACCGCGATCCG
CTGGCAGGTTCCCGCCCTCG

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator Of XRE Family; HTH Transcriptional Regulator

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MAFGQTVRFHRNQKGFGLNEFAERLGVSPAYWSRVEREQENPPRDDLVERVAAILEVKLDDLFCEAGRLPPDLRGDIKAV
VTLYRRSRDARNSTSK

Sequences:

>Translated_96_residues
MAFGQTVRFHRNQKGFGLNEFAERLGVSPAYWSRVEREQENPPRDDLVERVAAILEVKLDDLFCEAGRLPPDLRGDIKAV
VTLYRRSRDARNSTSK
>Mature_95_residues
AFGQTVRFHRNQKGFGLNEFAERLGVSPAYWSRVEREQENPPRDDLVERVAAILEVKLDDLFCEAGRLPPDLRGDIKAVV
TLYRRSRDARNSTSK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11034; Mature: 10902

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFGQTVRFHRNQKGFGLNEFAERLGVSPAYWSRVEREQENPPRDDLVERVAAILEVKLD
CCCCCCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DLFCEAGRLPPDLRGDIKAVVTLYRRSRDARNSTSK
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AFGQTVRFHRNQKGFGLNEFAERLGVSPAYWSRVEREQENPPRDDLVERVAAILEVKLD
CCCCCHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
DLFCEAGRLPPDLRGDIKAVVTLYRRSRDARNSTSK
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA