| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674969
Identifier: 75674969
GI number: 75674969
Start: 859059
End: 860039
Strand: Direct
Name: 75674969
Synonym: Nwi_0773
Alternate gene names: NA
Gene position: 859059-860039 (Clockwise)
Preceding gene: 75674964
Following gene: 75674970
Centisome position: 25.25
GC content: 58.82
Gene sequence:
>981_bases ATGAGCAAAAAGCCCCTAGCGTCGTGGCGATTTATGCCCGTTGTTGCGCTAGCTACGACAGCCATATGGGCAGCGTTGCC GACAATGGCTAACGCAGCCGATGCAGCGGCAGGTAAGAAATTATTCGATGATAAGACGTGCAGTGCATGTCACAGCATAG GCGGGGGGGATCTTGTCGGTCCCGACCTGAAGAATGTCACGAAAGAGCGTCCTCGTGAATGGCTGCATGAGTGGATCATG AAGCCTGACGCAATGATTGCCAAGAAGGATCCGGTCGCGGTCGAGCTCCTCGGCAAGTATAACGGCATGGAAATGCCGAA TATGGGGCTCACCTCTGCTGAGGTCGATAATATCATTGCATTCCTCGAAGGTGGGGGTGCGGGTGCATCCTCGGCTGCTG CGGCGCCGGCCCTTAAGGGTGATGCTGAGAACGGCAAGAACCTGTTCACGGGTAATGAGAAGTTCGCCAATGGTGGGCCG CCGTGCATGGCTTGTCATAGTAGTGGCGGTCTCGGTGCGTTCGGCGGTGGTGCGCTTGGTCCTGATTTGACCACTGCTGC AAAGCGACTTGGTGGTGCGAGCGGTCTGTCCTCCTGGTTGGCTGGTTTGCCCACTCCGACCATGAAGGCGGTCTGGACGA AGCAGCCGCCGACTCCGCAGGAGCGTGCAGACGTTGCTGCCTTCCTGTCCCAGGAGGGGTTGGCCGTCCGTTCGGCCTCT GCGATTTGGCAGCTTGCGGGCCTGACAGGGTTGGGTGCTGTGGTTCTTTTGCTGATCGCGGGCTTCAGGTGGCGGAACCG ATTGAAGTTCGGCGTGCGGCGCCCGATGATGGCTACGCCTACTACCGGACGAAGCACCGGACCGTATAACGGTGGTTGGT TTACGGGTACGTATTCCGACGGCTGGATCGGAAGGTTTAAGGGTACTGACGGCAATAGCAATAGGCCTCGCGGCCGGACG AACGCACCGAGGAGACACTGA
Upstream 100 bases:
>100_bases TCATGTGGGTCTGAGAACGACGGGTCACGAGCGGGAAACGTCTGTTGTCTAACATAAACTTAATGCCCGCCCGATCATAT GGATCTGAGGACGAGGGATC
Downstream 100 bases:
>100_bases TGAGCTGGATACTTGACCTCGTTAATCCCCGGGAGCGCAAGTGGGAAGAGTTCTACCGCAATCGCTGGTCCCACGATAAC GTCTTCCGCAGCACGCACGG
Product: cytochrome c, class I
Products: NA
Alternate protein names: Electron Transport /SenC; Electron Transporter SCO1/SenC Family Protein/Cytochrome C; Cytochrome C Family Protein
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSKKPLASWRFMPVVALATTAIWAALPTMANAADAAAGKKLFDDKTCSACHSIGGGDLVGPDLKNVTKERPREWLHEWIM KPDAMIAKKDPVAVELLGKYNGMEMPNMGLTSAEVDNIIAFLEGGGAGASSAAAAPALKGDAENGKNLFTGNEKFANGGP PCMACHSSGGLGAFGGGALGPDLTTAAKRLGGASGLSSWLAGLPTPTMKAVWTKQPPTPQERADVAAFLSQEGLAVRSAS AIWQLAGLTGLGAVVLLLIAGFRWRNRLKFGVRRPMMATPTTGRSTGPYNGGWFTGTYSDGWIGRFKGTDGNSNRPRGRT NAPRRH
Sequences:
>Translated_326_residues MSKKPLASWRFMPVVALATTAIWAALPTMANAADAAAGKKLFDDKTCSACHSIGGGDLVGPDLKNVTKERPREWLHEWIM KPDAMIAKKDPVAVELLGKYNGMEMPNMGLTSAEVDNIIAFLEGGGAGASSAAAAPALKGDAENGKNLFTGNEKFANGGP PCMACHSSGGLGAFGGGALGPDLTTAAKRLGGASGLSSWLAGLPTPTMKAVWTKQPPTPQERADVAAFLSQEGLAVRSAS AIWQLAGLTGLGAVVLLLIAGFRWRNRLKFGVRRPMMATPTTGRSTGPYNGGWFTGTYSDGWIGRFKGTDGNSNRPRGRT NAPRRH >Mature_325_residues SKKPLASWRFMPVVALATTAIWAALPTMANAADAAAGKKLFDDKTCSACHSIGGGDLVGPDLKNVTKERPREWLHEWIMK PDAMIAKKDPVAVELLGKYNGMEMPNMGLTSAEVDNIIAFLEGGGAGASSAAAAPALKGDAENGKNLFTGNEKFANGGPP CMACHSSGGLGAFGGGALGPDLTTAAKRLGGASGLSSWLAGLPTPTMKAVWTKQPPTPQERADVAAFLSQEGLAVRSASA IWQLAGLTGLGAVVLLLIAGFRWRNRLKFGVRRPMMATPTTGRSTGPYNGGWFTGTYSDGWIGRFKGTDGNSNRPRGRTN APRRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34094; Mature: 33963
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKPLASWRFMPVVALATTAIWAALPTMANAADAAAGKKLFDDKTCSACHSIGGGDLVG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCC PDLKNVTKERPREWLHEWIMKPDAMIAKKDPVAVELLGKYNGMEMPNMGLTSAEVDNIIA CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHEEE FLEGGGAGASSAAAAPALKGDAENGKNLFTGNEKFANGGPPCMACHSSGGLGAFGGGALG EEECCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCC PDLTTAAKRLGGASGLSSWLAGLPTPTMKAVWTKQPPTPQERADVAAFLSQEGLAVRSAS CHHHHHHHHHCCHHHHHHHHHCCCCCCHHHEECCCCCCCHHHHHHHHHHHHCCCCHHHHH AIWQLAGLTGLGAVVLLLIAGFRWRNRLKFGVRRPMMATPTTGRSTGPYNGGWFTGTYSD HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEECCCCC GWIGRFKGTDGNSNRPRGRTNAPRRH CCEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKKPLASWRFMPVVALATTAIWAALPTMANAADAAAGKKLFDDKTCSACHSIGGGDLVG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCC PDLKNVTKERPREWLHEWIMKPDAMIAKKDPVAVELLGKYNGMEMPNMGLTSAEVDNIIA CCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHEEE FLEGGGAGASSAAAAPALKGDAENGKNLFTGNEKFANGGPPCMACHSSGGLGAFGGGALG EEECCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCC PDLTTAAKRLGGASGLSSWLAGLPTPTMKAVWTKQPPTPQERADVAAFLSQEGLAVRSAS CHHHHHHHHHCCHHHHHHHHHCCCCCCHHHEECCCCCCCHHHHHHHHHHHHCCCCHHHHH AIWQLAGLTGLGAVVLLLIAGFRWRNRLKFGVRRPMMATPTTGRSTGPYNGGWFTGTYSD HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCEEECCCCC GWIGRFKGTDGNSNRPRGRTNAPRRH CCEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA