Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is fptA [H]

Identifier: 75674858

GI number: 75674858

Start: 740713

End: 741852

Strand: Direct

Name: fptA [H]

Synonym: Nwi_0661

Alternate gene names: 75674858

Gene position: 740713-741852 (Clockwise)

Preceding gene: 75674857

Following gene: 75674859

Centisome position: 21.77

GC content: 56.75

Gene sequence:

>1140_bases
ATGAGCCAGAACCTCCGTTCCCGTGACCCCGGAACAGTCTCAATTCATCTGACGACGGACACTTTGGGTGCTAATATCAA
CAGGCTGGATCTCCACCTGTTGAACCGAAAAAACCTGAGTATGTGGGTAGGATCGATGCGTAACAGCATCTTCCAATACA
ACCCTGCCGACTATCCTGCCGGACCCTACGTTCCTAATAACGATAACACCTACAAAATCTTACAGAAAGGCGTGTATGGA
TCGTTCGTGGCTCATGTCGCGGACCCTCTGAAGCTGATTTTCGGGGGGCGGTTGAGTTGGTACAGTTACAATAGTGCCAT
TAATGCTGTTGACCAGAACACGGGCGCTGTCACCTCCACATCGTTGACGGCATACGAAGACAACAAGGTTTTCACGCCTT
ATCTCGGCATGGTTTACGACCTGACCAGTCAATGGTCGGCCTATGCCAGCTTTGCCGAGACCTATCAGCCGCAGGCTTTC
AACTTAAGGGGGCCTCTGCCCGGCACTCCGCTTGGCCCTATCACGGGGCGCACCTATGAGGTCGGCGTCAAGGGCAGCCT
GCTCGACGGCCGCTTGAACACGACGTTTGCGCTATATCATGTGAAGCGCAACGGTGAGGCGGTGCGGGATTTCGCCTATC
CGGCTACTCCGGGCGATCTTGGCACAAATTGCTGCTGGCTCGGTGACGGCCGCATCGTCAGCCAGGGCGTGGATATCGAG
GTCAACGGCGAGGTCGCCGCCGGCTGGCAGGTTTCGGCCGGCTATACTTTCAACGACAACGAGAACATAGCGGGCGGCGG
CCGCTACAACGCGTTCACACCGAAGCATCTGTTCAAGCTGTGGACGAGTTACGATCTGCAAGGGCCGCTTGAGGGCTTCA
AGATCGGCGGCGGCGTGACCGCGCAAAGCTCATTCTACCAGACCGGAACATTCGCCGGGAATCCGTTTAGAATTACCGAG
CCGGGCCGCGCGGTGGTGGATCTGTTCGCGCAATACCGTCTCGATGAGCACTGGACCCTGGCTCTCAACGTCAACAACCT
GTTCGACAGGACATACTACCAGGCCATCGGAGCTTTCTACCTCGGCAATTTCTACGGCGCGCCACGTAATTTCCTGCTGA
GCGCGCGGGCGAGGTTCTAA

Upstream 100 bases:

>100_bases
CGGGCAGACCATCCTCACCGAACGCGAAAGGATCAAACGCCAGACCATCCACCAAAGACGCTTGCAGCATCACCTGCAGG
CCGCCTAACCTCAAACCCAG

Downstream 100 bases:

>100_bases
GCATCACTCGCGGTGGCTTCAGCGCGGCTGCGAACGAGTTCGATGTCAGGCAGCCGATCGTCGGCAGGCGGGGCACGGCC
TTCGGGGCCGTTTCCAGTCG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Fe(III)-pyochelin receptor [H]

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MSQNLRSRDPGTVSIHLTTDTLGANINRLDLHLLNRKNLSMWVGSMRNSIFQYNPADYPAGPYVPNNDNTYKILQKGVYG
SFVAHVADPLKLIFGGRLSWYSYNSAINAVDQNTGAVTSTSLTAYEDNKVFTPYLGMVYDLTSQWSAYASFAETYQPQAF
NLRGPLPGTPLGPITGRTYEVGVKGSLLDGRLNTTFALYHVKRNGEAVRDFAYPATPGDLGTNCCWLGDGRIVSQGVDIE
VNGEVAAGWQVSAGYTFNDNENIAGGGRYNAFTPKHLFKLWTSYDLQGPLEGFKIGGGVTAQSSFYQTGTFAGNPFRITE
PGRAVVDLFAQYRLDEHWTLALNVNNLFDRTYYQAIGAFYLGNFYGAPRNFLLSARARF

Sequences:

>Translated_379_residues
MSQNLRSRDPGTVSIHLTTDTLGANINRLDLHLLNRKNLSMWVGSMRNSIFQYNPADYPAGPYVPNNDNTYKILQKGVYG
SFVAHVADPLKLIFGGRLSWYSYNSAINAVDQNTGAVTSTSLTAYEDNKVFTPYLGMVYDLTSQWSAYASFAETYQPQAF
NLRGPLPGTPLGPITGRTYEVGVKGSLLDGRLNTTFALYHVKRNGEAVRDFAYPATPGDLGTNCCWLGDGRIVSQGVDIE
VNGEVAAGWQVSAGYTFNDNENIAGGGRYNAFTPKHLFKLWTSYDLQGPLEGFKIGGGVTAQSSFYQTGTFAGNPFRITE
PGRAVVDLFAQYRLDEHWTLALNVNNLFDRTYYQAIGAFYLGNFYGAPRNFLLSARARF
>Mature_378_residues
SQNLRSRDPGTVSIHLTTDTLGANINRLDLHLLNRKNLSMWVGSMRNSIFQYNPADYPAGPYVPNNDNTYKILQKGVYGS
FVAHVADPLKLIFGGRLSWYSYNSAINAVDQNTGAVTSTSLTAYEDNKVFTPYLGMVYDLTSQWSAYASFAETYQPQAFN
LRGPLPGTPLGPITGRTYEVGVKGSLLDGRLNTTFALYHVKRNGEAVRDFAYPATPGDLGTNCCWLGDGRIVSQGVDIEV
NGEVAAGWQVSAGYTFNDNENIAGGGRYNAFTPKHLFKLWTSYDLQGPLEGFKIGGGVTAQSSFYQTGTFAGNPFRITEP
GRAVVDLFAQYRLDEHWTLALNVNNLFDRTYYQAIGAFYLGNFYGAPRNFLLSARARF

Specific function: High-affinity outer membrane receptor required for the transport of Fe(3+)-pyochelin [H]

COG id: COG4773

COG function: function code P; Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787344, Length=337, Percent_Identity=32.3442136498516, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1786344, Length=345, Percent_Identity=30.1449275362319, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787024, Length=328, Percent_Identity=27.1341463414634, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010917
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 41842; Mature: 41711

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNLRSRDPGTVSIHLTTDTLGANINRLDLHLLNRKNLSMWVGSMRNSIFQYNPADYPA
CCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHEEECCCCCCC
GPYVPNNDNTYKILQKGVYGSFVAHVADPLKLIFGGRLSWYSYNSAINAVDQNTGAVTST
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHCCCCCCCCEEEC
SLTAYEDNKVFTPYLGMVYDLTSQWSAYASFAETYQPQAFNLRGPLPGTPLGPITGRTYE
EEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEE
VGVKGSLLDGRLNTTFALYHVKRNGEAVRDFAYPATPGDLGTNCCWLGDGRIVSQGVDIE
ECCCCEEECCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCEEEECCCEEEECCEEEE
VNGEVAAGWQVSAGYTFNDNENIAGGGRYNAFTPKHLFKLWTSYDLQGPLEGFKIGGGVT
ECCCEEECEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCEE
AQSSFYQTGTFAGNPFRITEPGRAVVDLFAQYRLDEHWTLALNVNNLFDRTYYQAIGAFY
CCCCEEECCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH
LGNFYGAPRNFLLSARARF
HHHHCCCCCCEEEEECCCC
>Mature Secondary Structure 
SQNLRSRDPGTVSIHLTTDTLGANINRLDLHLLNRKNLSMWVGSMRNSIFQYNPADYPA
CCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHEEECCCCCCC
GPYVPNNDNTYKILQKGVYGSFVAHVADPLKLIFGGRLSWYSYNSAINAVDQNTGAVTST
CCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEEECCHHHCCCCCCCCEEEC
SLTAYEDNKVFTPYLGMVYDLTSQWSAYASFAETYQPQAFNLRGPLPGTPLGPITGRTYE
EEEEECCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCEEE
VGVKGSLLDGRLNTTFALYHVKRNGEAVRDFAYPATPGDLGTNCCWLGDGRIVSQGVDIE
ECCCCEEECCCCCCEEEEEEEECCCCCHHHHCCCCCCCCCCCCEEEECCCEEEECCEEEE
VNGEVAAGWQVSAGYTFNDNENIAGGGRYNAFTPKHLFKLWTSYDLQGPLEGFKIGGGVT
ECCCEEECEEEECCEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCEE
AQSSFYQTGTFAGNPFRITEPGRAVVDLFAQYRLDEHWTLALNVNNLFDRTYYQAIGAFY
CCCCEEECCCCCCCCEEECCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHH
LGNFYGAPRNFLLSARARF
HHHHCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8288523; 10984043 [H]