| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is 75674837
Identifier: 75674837
GI number: 75674837
Start: 719448
End: 719822
Strand: Direct
Name: 75674837
Synonym: Nwi_0639
Alternate gene names: NA
Gene position: 719448-719822 (Clockwise)
Preceding gene: 75674836
Following gene: 75674838
Centisome position: 21.15
GC content: 65.07
Gene sequence:
>375_bases ATGAGACAGAAATCCGGGCCGGAGAAAGCACCGGCAGAGCAGGTCGTGAAGGACATCCGCCGGGCAACGCGCCGGCAGTT CTCGGCTGAAGAGAAGATCCGCATCGTGCTGGAAGGCGTGCGCGGCGAGGAGAGCATCGCCGAGCTGTGTCGGCGCGAGG GGATCGCCTCGTCGATGTATTACGGCTGGTCGAAGGAGTTCCTCGACGCCGGCAAGCGCCGTCTCGCTGGTGACACGGCC CGCGCCGCGACGTCGGACGAGGTGAAAGAGCTGCGCCGTGAGGCGCAGGCCCTGAAGGAGGCCGTGGCCGATCTCACCCT GGAAAACCGCCTGCTGAAAAAAAGCATGCTCGCGGATGGGGAGGACGACACATGA
Upstream 100 bases:
>100_bases CAGCTTGTGCAAGTTTGTCCGCCGTCAGGGCTCTTGAGACAGTTTAGGGGTTTTCGGGAAGGGAGGATTTCTGGATCATC GCAGCCAATTTGGAGCGCAG
Downstream 100 bases:
>100_bases GGTATCCTGCATCCGAAAAGGCCGAGATCATTCGCCTGGTCGAGGCCTCGCATCTGCCGGCACGGCGAACCCTGGACAAG CTCGGCATCCCGCGCGCCAC
Product: transposase IS3/IS911
Products: NA
Alternate protein names: Transposase IS3/IS; Transposase; Transposase OrfA; Transposase Subfamily; Transposase IS3 Family Protein; Transposase Subfamily Protein
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MRQKSGPEKAPAEQVVKDIRRATRRQFSAEEKIRIVLEGVRGEESIAELCRREGIASSMYYGWSKEFLDAGKRRLAGDTA RAATSDEVKELRREAQALKEAVADLTLENRLLKKSMLADGEDDT
Sequences:
>Translated_124_residues MRQKSGPEKAPAEQVVKDIRRATRRQFSAEEKIRIVLEGVRGEESIAELCRREGIASSMYYGWSKEFLDAGKRRLAGDTA RAATSDEVKELRREAQALKEAVADLTLENRLLKKSMLADGEDDT >Mature_124_residues MRQKSGPEKAPAEQVVKDIRRATRRQFSAEEKIRIVLEGVRGEESIAELCRREGIASSMYYGWSKEFLDAGKRRLAGDTA RAATSDEVKELRREAQALKEAVADLTLENRLLKKSMLADGEDDT
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13955; Mature: 13955
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQKSGPEKAPAEQVVKDIRRATRRQFSAEEKIRIVLEGVRGEESIAELCRREGIASSMY CCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH YGWSKEFLDAGKRRLAGDTARAATSDEVKELRREAQALKEAVADLTLENRLLKKSMLADG HCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EDDT CCCC >Mature Secondary Structure MRQKSGPEKAPAEQVVKDIRRATRRQFSAEEKIRIVLEGVRGEESIAELCRREGIASSMY CCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHH YGWSKEFLDAGKRRLAGDTARAATSDEVKELRREAQALKEAVADLTLENRLLKKSMLADG HCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC EDDT CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA