Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is yhhW [C]

Identifier: 75674814

GI number: 75674814

Start: 695774

End: 696655

Strand: Direct

Name: yhhW [C]

Synonym: Nwi_0616

Alternate gene names: 75674814

Gene position: 695774-696655 (Clockwise)

Preceding gene: 75674811

Following gene: 75674816

Centisome position: 20.45

GC content: 65.87

Gene sequence:

>882_bases
ATGAGAAAGGTTCTCGGTGTTTTCAGCGGCCCCCGGCAGCATTGGGTCGGCGATGGCTTTCCGGTCCGCTCGCTGTTTTC
GCACGCCAGCCACGGCGACCATGTCAGCCCGTTTCTGCTGCTGGATTATGCCGGCCCCGCCGATTTCACCCCGGCGGAGC
GACCGCGCGGCGTCGGCGTCCATCCGCATCGCGGTTTCGAGACCGTCACCATCGTCTATCAGGGCGAGGTCGAGCACCGC
GATTCCACCGGCAACGGTGGGCTGATCGGGCCTGGGGACGTGCAATGGATGACGGCCGCCTCGGGCATCCTGCACGAGGA
GTTCCACTCCCGCGCCTTCACGAAGAAGGGCGGCGCGCTGGAGATGGTGCAGCTCTGGGTCAACCTGCCGGCCAGGGACA
AGAACGCGGAGCCTGGCTATCAGACCTTGCTCAACGCGGATATTCCCTCGGTCGACCTGCCGGACGGCGCGGGCCGGTTG
CGGGTGATCGCGGGAGAGTTCGACGGCCGCAAGGGGCCTGCGAAAACCTTCACGCCGGTCGGTATCTACGACGTGAAGCT
CAATCGCGACGGCGTTGCGACGCTTAACCCGCCGGAGGGGCACACCGTTGCGGTGGTGGTGCTGAAGGGCACCGTACTGG
TTGGCGGCAGCGAGATTGCCCGCGAGGCGCAGTTCGCGCTGCTCGACCGCAATGGCGGCGAGGTGACCATCGAGGCCAAT
GGTGATGCCTTGGTGCTGATCCTGTCCGGCGTACCGATCGACGAGCCGGTGGTGATGCGCGGTCCCTTCGTCATGAATAC
GGAGGGTGAGATCCGCCAGGCCATGATCGATTTCCAGAGCGGCCGTTTCGGCACTCTGGAGCCGGTCGGGGCTGGTGCCT
GA

Upstream 100 bases:

>100_bases
ACGTTGAGGCGCGATATTGCCAGCTAGCGGGTTCTTTGTCTCGCTCATATTGTTGATGCCAAGACGGCGGCCGATCCGGC
TGCGTTACGGAGTGACGATC

Downstream 100 bases:

>100_bases
CCAACAACGCTCGCGGGAGGCGGTACGCCGCTTCCCGCTTTTCTTTTGTCTTTTTTCTTTCGTCTTTTTGAATCCGTTTA
GCCTGAAGAAAATGCTCTCG

Product: pirin

Products: NA

Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MRKVLGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAERPRGVGVHPHRGFETVTIVYQGEVEHR
DSTGNGGLIGPGDVQWMTAASGILHEEFHSRAFTKKGGALEMVQLWVNLPARDKNAEPGYQTLLNADIPSVDLPDGAGRL
RVIAGEFDGRKGPAKTFTPVGIYDVKLNRDGVATLNPPEGHTVAVVVLKGTVLVGGSEIAREAQFALLDRNGGEVTIEAN
GDALVLILSGVPIDEPVVMRGPFVMNTEGEIRQAMIDFQSGRFGTLEPVGAGA

Sequences:

>Translated_293_residues
MRKVLGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAERPRGVGVHPHRGFETVTIVYQGEVEHR
DSTGNGGLIGPGDVQWMTAASGILHEEFHSRAFTKKGGALEMVQLWVNLPARDKNAEPGYQTLLNADIPSVDLPDGAGRL
RVIAGEFDGRKGPAKTFTPVGIYDVKLNRDGVATLNPPEGHTVAVVVLKGTVLVGGSEIAREAQFALLDRNGGEVTIEAN
GDALVLILSGVPIDEPVVMRGPFVMNTEGEIRQAMIDFQSGRFGTLEPVGAGA
>Mature_293_residues
MRKVLGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAERPRGVGVHPHRGFETVTIVYQGEVEHR
DSTGNGGLIGPGDVQWMTAASGILHEEFHSRAFTKKGGALEMVQLWVNLPARDKNAEPGYQTLLNADIPSVDLPDGAGRL
RVIAGEFDGRKGPAKTFTPVGIYDVKLNRDGVATLNPPEGHTVAVVVLKGTVLVGGSEIAREAQFALLDRNGGEVTIEAN
GDALVLILSGVPIDEPVVMRGPFVMNTEGEIRQAMIDFQSGRFGTLEPVGAGA

Specific function: Putative quercetin 2,3-dioxygenase [H]

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=257, Percent_Identity=37.3540856031128, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI4505823, Length=257, Percent_Identity=37.3540856031128, Blast_Score=139, Evalue=3e-33,
Organism=Escherichia coli, GI1789847, Length=238, Percent_Identity=26.0504201680672, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: =1.13.11.24 [H]

Molecular weight: Translated: 31257; Mature: 31257

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKVLGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAERPRGVGV
CCCEEECCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
HPHRGFETVTIVYQGEVEHRDSTGNGGLIGPGDVQWMTAASGILHEEFHSRAFTKKGGAL
CCCCCCEEEEEEEECCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCE
EMVQLWVNLPARDKNAEPGYQTLLNADIPSVDLPDGAGRLRVIAGEFDGRKGPAKTFTPV
EEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC
GIYDVKLNRDGVATLNPPEGHTVAVVVLKGTVLVGGSEIAREAQFALLDRNGGEVTIEAN
EEEEEEECCCCEEEECCCCCCEEEEEEEEEEEEECCHHHHHCEEEEEEECCCCEEEEEEC
GDALVLILSGVPIDEPVVMRGPFVMNTEGEIRQAMIDFQSGRFGTLEPVGAGA
CCEEEEEEECCCCCCCEEEECCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKVLGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAERPRGVGV
CCCEEECCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
HPHRGFETVTIVYQGEVEHRDSTGNGGLIGPGDVQWMTAASGILHEEFHSRAFTKKGGAL
CCCCCCEEEEEEEECCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCE
EMVQLWVNLPARDKNAEPGYQTLLNADIPSVDLPDGAGRLRVIAGEFDGRKGPAKTFTPV
EEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC
GIYDVKLNRDGVATLNPPEGHTVAVVVLKGTVLVGGSEIAREAQFALLDRNGGEVTIEAN
EEEEEEECCCCEEEECCCCCCEEEEEEEEEEEEECCHHHHHCEEEEEEECCCCEEEEEEC
GDALVLILSGVPIDEPVVMRGPFVMNTEGEIRQAMIDFQSGRFGTLEPVGAGA
CCEEEEEEECCCCCCCEEEECCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]