| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674808
Identifier: 75674808
GI number: 75674808
Start: 689695
End: 690669
Strand: Direct
Name: 75674808
Synonym: Nwi_0610
Alternate gene names: NA
Gene position: 689695-690669 (Clockwise)
Preceding gene: 75674807
Following gene: 75674809
Centisome position: 20.27
GC content: 63.38
Gene sequence:
>975_bases ATGAGCGAAACCAGCCCAATCCTCATCATCACGGCGAAGCTCGACACTCACGCGGATGCCGTCATCAGCGAGTTGAAGGC GCGTGGGCAGCCGTTCTTCCGCCTGAACACCGACGATTTTCACACCGAGTACAAGACCGTGCTGCGTTCCGGCGATCGCA GTGTAACGTTCGAGGACATCTGGGGCCGCTCGGTCCGTTTTCCGCATGATGTTCACGCGATATGGCACCGCAAGCCGATC GAATCGAACAATCCGCCGGGCGTGGAGGAGTGCGGCACCGCGGATATGATCCAGGGCGAGACGCTGGAGCTTCTCAACTC GCTGAGCTGCTTCCACGACCGGCCCTGGTACAACAACCCCGAGAGCAACCGGGTGTCGCAGCGCAAGTTTCCCCAGCTCT GCCTGGCGAGCGAGCTTGGCTTCCGGGTGCCGCGCACCCTGATCACCAACGACCCCGGAGAGGCTCGGCGCTTTGCCGCT CAGACGCAGGGCAGCATCCTGTGCAAGGCGATGAAGGAGGCGGGTTACTCGACCCCGAACGGATCGTATTTCATCTTTTC GCGCCAGGTCGGCCAGGATGAATTCGACGCACACGCCGACCGCATCGCGCTGTGCCCCACGCTGCTCCAGGAGTACATCG AGAAGGCCTACGAACTGCGCGTCACCGTCATCGGCGATGTGGTGTTCGCCTGCCGGCTGGATTCCCAGGCCGACGAGGCG GCCAGGATCGACTGGCGGATGGTGACGCCGGACCGGATCGCCCACAGCATGGTGACCCTGGACAACAAGGTCGAGGCTGC GCTCAAGGCGATGATGCGGCGCTTCGGCCTGCGTTTCGGCGCCTTCGACCTGATCGTGACGCCCGAGGGCGAGACCGTGT TCGTCGAACTCAACCCCAATGGCCAGTGGTACTGGATCGAGTTGACCACCGGCGCGCCGATGGCGTCCGCCATGGCCGAC CTCCTGAAATCCTGA
Upstream 100 bases:
>100_bases CGGCGGCGCGACCTCCAGCGACACGACCCATCGGCGGGACGACTAGCCTGTCCAGCCACCGCGCCGCTGGCCGGCGCGGT GGCTTCTCCGGCATCGCGCC
Downstream 100 bases:
>100_bases TTCCATGAACGCCTGGGACGCTCTGGTCGAAGGCCGCCTGGGAAGCGGGCCCAGGGCGTTCTGGGAACTGTACCGCGAAG CCTGCCGCGCCGAGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: RimK Domain Protein ATP-Grasp; RimK-Like Protein; Rimk Domain Protein ATP-Grasp
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MSETSPILIITAKLDTHADAVISELKARGQPFFRLNTDDFHTEYKTVLRSGDRSVTFEDIWGRSVRFPHDVHAIWHRKPI ESNNPPGVEECGTADMIQGETLELLNSLSCFHDRPWYNNPESNRVSQRKFPQLCLASELGFRVPRTLITNDPGEARRFAA QTQGSILCKAMKEAGYSTPNGSYFIFSRQVGQDEFDAHADRIALCPTLLQEYIEKAYELRVTVIGDVVFACRLDSQADEA ARIDWRMVTPDRIAHSMVTLDNKVEAALKAMMRRFGLRFGAFDLIVTPEGETVFVELNPNGQWYWIELTTGAPMASAMAD LLKS
Sequences:
>Translated_324_residues MSETSPILIITAKLDTHADAVISELKARGQPFFRLNTDDFHTEYKTVLRSGDRSVTFEDIWGRSVRFPHDVHAIWHRKPI ESNNPPGVEECGTADMIQGETLELLNSLSCFHDRPWYNNPESNRVSQRKFPQLCLASELGFRVPRTLITNDPGEARRFAA QTQGSILCKAMKEAGYSTPNGSYFIFSRQVGQDEFDAHADRIALCPTLLQEYIEKAYELRVTVIGDVVFACRLDSQADEA ARIDWRMVTPDRIAHSMVTLDNKVEAALKAMMRRFGLRFGAFDLIVTPEGETVFVELNPNGQWYWIELTTGAPMASAMAD LLKS >Mature_323_residues SETSPILIITAKLDTHADAVISELKARGQPFFRLNTDDFHTEYKTVLRSGDRSVTFEDIWGRSVRFPHDVHAIWHRKPIE SNNPPGVEECGTADMIQGETLELLNSLSCFHDRPWYNNPESNRVSQRKFPQLCLASELGFRVPRTLITNDPGEARRFAAQ TQGSILCKAMKEAGYSTPNGSYFIFSRQVGQDEFDAHADRIALCPTLLQEYIEKAYELRVTVIGDVVFACRLDSQADEAA RIDWRMVTPDRIAHSMVTLDNKVEAALKAMMRRFGLRFGAFDLIVTPEGETVFVELNPNGQWYWIELTTGAPMASAMADL LKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36580; Mature: 36449
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETSPILIITAKLDTHADAVISELKARGQPFFRLNTDDFHTEYKTVLRSGDRSVTFEDI CCCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEHHHH WGRSVRFPHDVHAIWHRKPIESNNPPGVEECGTADMIQGETLELLNSLSCFHDRPWYNNP CCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC ESNRVSQRKFPQLCLASELGFRVPRTLITNDPGEARRFAAQTQGSILCKAMKEAGYSTPN CCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCC GSYFIFSRQVGQDEFDAHADRIALCPTLLQEYIEKAYELRVTVIGDVVFACRLDSQADEA CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHEEEEEECCCCCCCH ARIDWRMVTPDRIAHSMVTLDNKVEAALKAMMRRFGLRFGAFDLIVTPEGETVFVELNPN HCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCC GQWYWIELTTGAPMASAMADLLKS CCEEEEEEECCCCHHHHHHHHHCC >Mature Secondary Structure SETSPILIITAKLDTHADAVISELKARGQPFFRLNTDDFHTEYKTVLRSGDRSVTFEDI CCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEHHHH WGRSVRFPHDVHAIWHRKPIESNNPPGVEECGTADMIQGETLELLNSLSCFHDRPWYNNP CCCCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC ESNRVSQRKFPQLCLASELGFRVPRTLITNDPGEARRFAAQTQGSILCKAMKEAGYSTPN CCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCC GSYFIFSRQVGQDEFDAHADRIALCPTLLQEYIEKAYELRVTVIGDVVFACRLDSQADEA CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHEEEEEECCCCCCCH ARIDWRMVTPDRIAHSMVTLDNKVEAALKAMMRRFGLRFGAFDLIVTPEGETVFVELNPN HCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCC GQWYWIELTTGAPMASAMADLLKS CCEEEEEEECCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA