Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

Click here to switch to the map view.

The map label for this gene is 75674739

Identifier: 75674739

GI number: 75674739

Start: 606862

End: 608112

Strand: Direct

Name: 75674739

Synonym: Nwi_0541

Alternate gene names: NA

Gene position: 606862-608112 (Clockwise)

Preceding gene: 75674737

Following gene: 75674744

Centisome position: 17.84

GC content: 56.59

Gene sequence:

>1251_bases
GTGGAAACGGAAACTGCGGCACTGACAAGGCTCGGTCTGGATCGGGGCGTCGAGGCGCTCACGGCCAACGAGATCGAGCC
AAGATTGAAAGAATTCTTTTCGGGACGGATTGCCAATCCGAATCCTGAAGAGTTGATGCGGTCAGTCAAGGAACTGGAAG
AGCAGTTTAGCGGATACAGCGAATATCAATTCGCGAGAGCCGCGGTGTTGATGCAGGCGTGCGATTTTACGCGAGCGCGG
GAGATTCTGATGCGCCTCGCGAAAGAAACGCCGTCCGATCCCCGTATCCTGCATCGGCTTGCCGTAACCCATTTGAACAT
CGGTTCGGCACAGGCGGCGCAAGACACCTACCTTGCCGCCTTGGCTGTCGCCCCGGCGAGCGAAAATCTCCGCCGGGAAT
TCGCCGGCCTTCTGCGTGTGATGGAGGCCGGAAAGCTCTATGCGGGCGTGAGCCGCAAGAAGCACAGATTGTCCATGGTT
TGCGCGATCAAGAACGAGGCGGACGATCTGCTTGAGTGGCTGCACTTTCACAAGCTGGCCGGCGTTGATCATTTCTACCT
GTATGACAATGAAAGCACCGACGAAACACGCGCGATAATCGAATCCTTTCCCTGGCCGGATATGATCACCTACCACTATG
TGAAGGGTGAGTTCGGACAGATACGCGCCTTTCATCACGCGATCGACAGCTACCGGAACAGCTCCGAATGGTGCGCGTTC
ATCGACGCCGATGAGTTTCTCTATCCCGTCGAGGGCGGGAGCATCAGGGATGTTCTGGACGGAATTCCTTCGGCGCCGGC
GGTCGCGGTTCAGTGGCTGAATTTCGGCTCCAATGGCCATGATGCAAAACCAGACGGCCTTTGCATCGAGTCATTCACGC
GAAGGGCTCCCGATGATTTCCCGGATCATTATGTGATGAAGTCGATCGTACGCCCTGATGCGATCGTGGCCTATCTTCAC
CCCCACCAATCTCTGGTGCTCGGATGTTACGTTCAGGAGGACGGCTCTCCCGTTTTTCCGATCGGCGGCCGATGCTCGGT
TCCGAAGCGCAGGAAACTGGCCATCAATCATTACTATACGAAATCTCGACAGCAGCTTCTGAAGAAGCGGGAGCGGGGAA
GGCCCTTGGCGGCAGGCGATCCCGAACGCATACGGGCGATGGAGTTCTTTATGCTTCGCGACCGTAACGACGTCGAGGAT
CGGACGATCCTGAAGTTCCTGCCTGAGCTCAAGAAGCTGATTCATCGCTAA

Upstream 100 bases:

>100_bases
AACACTGCTCTGATCTGGTAAGACCGTATAACAATCGAGTTACATCACCGGGGCTGAGAGCCGATGTCCGTTTTTTTGAA
CAAGCCTGGAGCATGACGGG

Downstream 100 bases:

>100_bases
GAGTTGCGACGAGAATGCTGCGCGGAAAAGGTGCGGCGTTGACCGCCCTATCACTTCCGTGCGCCCGGCGATTGGGGGCG
GGACGCCGAAGTCGTTTATA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
METETAALTRLGLDRGVEALTANEIEPRLKEFFSGRIANPNPEELMRSVKELEEQFSGYSEYQFARAAVLMQACDFTRAR
EILMRLAKETPSDPRILHRLAVTHLNIGSAQAAQDTYLAALAVAPASENLRREFAGLLRVMEAGKLYAGVSRKKHRLSMV
CAIKNEADDLLEWLHFHKLAGVDHFYLYDNESTDETRAIIESFPWPDMITYHYVKGEFGQIRAFHHAIDSYRNSSEWCAF
IDADEFLYPVEGGSIRDVLDGIPSAPAVAVQWLNFGSNGHDAKPDGLCIESFTRRAPDDFPDHYVMKSIVRPDAIVAYLH
PHQSLVLGCYVQEDGSPVFPIGGRCSVPKRRKLAINHYYTKSRQQLLKKRERGRPLAAGDPERIRAMEFFMLRDRNDVED
RTILKFLPELKKLIHR

Sequences:

>Translated_416_residues
METETAALTRLGLDRGVEALTANEIEPRLKEFFSGRIANPNPEELMRSVKELEEQFSGYSEYQFARAAVLMQACDFTRAR
EILMRLAKETPSDPRILHRLAVTHLNIGSAQAAQDTYLAALAVAPASENLRREFAGLLRVMEAGKLYAGVSRKKHRLSMV
CAIKNEADDLLEWLHFHKLAGVDHFYLYDNESTDETRAIIESFPWPDMITYHYVKGEFGQIRAFHHAIDSYRNSSEWCAF
IDADEFLYPVEGGSIRDVLDGIPSAPAVAVQWLNFGSNGHDAKPDGLCIESFTRRAPDDFPDHYVMKSIVRPDAIVAYLH
PHQSLVLGCYVQEDGSPVFPIGGRCSVPKRRKLAINHYYTKSRQQLLKKRERGRPLAAGDPERIRAMEFFMLRDRNDVED
RTILKFLPELKKLIHR
>Mature_416_residues
METETAALTRLGLDRGVEALTANEIEPRLKEFFSGRIANPNPEELMRSVKELEEQFSGYSEYQFARAAVLMQACDFTRAR
EILMRLAKETPSDPRILHRLAVTHLNIGSAQAAQDTYLAALAVAPASENLRREFAGLLRVMEAGKLYAGVSRKKHRLSMV
CAIKNEADDLLEWLHFHKLAGVDHFYLYDNESTDETRAIIESFPWPDMITYHYVKGEFGQIRAFHHAIDSYRNSSEWCAF
IDADEFLYPVEGGSIRDVLDGIPSAPAVAVQWLNFGSNGHDAKPDGLCIESFTRRAPDDFPDHYVMKSIVRPDAIVAYLH
PHQSLVLGCYVQEDGSPVFPIGGRCSVPKRRKLAINHYYTKSRQQLLKKRERGRPLAAGDPERIRAMEFFMLRDRNDVED
RTILKFLPELKKLIHR

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47395; Mature: 47395

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METETAALTRLGLDRGVEALTANEIEPRLKEFFSGRIANPNPEELMRSVKELEEQFSGYS
CCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCH
EYQFARAAVLMQACDFTRAREILMRLAKETPSDPRILHRLAVTHLNIGSAQAAQDTYLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
LAVAPASENLRREFAGLLRVMEAGKLYAGVSRKKHRLSMVCAIKNEADDLLEWLHFHKLA
HEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCHHHHHHHHHHHHHC
GVDHFYLYDNESTDETRAIIESFPWPDMITYHYVKGEFGQIRAFHHAIDSYRNSSEWCAF
CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
IDADEFLYPVEGGSIRDVLDGIPSAPAVAVQWLNFGSNGHDAKPDGLCIESFTRRAPDDF
EECCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC
PDHYVMKSIVRPDAIVAYLHPHQSLVLGCYVQEDGSPVFPIGGRCSVPKRRKLAINHYYT
CHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHH
KSRQQLLKKRERGRPLAAGDPERIRAMEFFMLRDRNDVEDRTILKFLPELKKLIHR
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METETAALTRLGLDRGVEALTANEIEPRLKEFFSGRIANPNPEELMRSVKELEEQFSGYS
CCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCH
EYQFARAAVLMQACDFTRAREILMRLAKETPSDPRILHRLAVTHLNIGSAQAAQDTYLAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
LAVAPASENLRREFAGLLRVMEAGKLYAGVSRKKHRLSMVCAIKNEADDLLEWLHFHKLA
HEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCHHHHHHHHHHHHHC
GVDHFYLYDNESTDETRAIIESFPWPDMITYHYVKGEFGQIRAFHHAIDSYRNSSEWCAF
CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE
IDADEFLYPVEGGSIRDVLDGIPSAPAVAVQWLNFGSNGHDAKPDGLCIESFTRRAPDDF
EECCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC
PDHYVMKSIVRPDAIVAYLHPHQSLVLGCYVQEDGSPVFPIGGRCSVPKRRKLAINHYYT
CHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHH
KSRQQLLKKRERGRPLAAGDPERIRAMEFFMLRDRNDVEDRTILKFLPELKKLIHR
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA