| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75674739
Identifier: 75674739
GI number: 75674739
Start: 606862
End: 608112
Strand: Direct
Name: 75674739
Synonym: Nwi_0541
Alternate gene names: NA
Gene position: 606862-608112 (Clockwise)
Preceding gene: 75674737
Following gene: 75674744
Centisome position: 17.84
GC content: 56.59
Gene sequence:
>1251_bases GTGGAAACGGAAACTGCGGCACTGACAAGGCTCGGTCTGGATCGGGGCGTCGAGGCGCTCACGGCCAACGAGATCGAGCC AAGATTGAAAGAATTCTTTTCGGGACGGATTGCCAATCCGAATCCTGAAGAGTTGATGCGGTCAGTCAAGGAACTGGAAG AGCAGTTTAGCGGATACAGCGAATATCAATTCGCGAGAGCCGCGGTGTTGATGCAGGCGTGCGATTTTACGCGAGCGCGG GAGATTCTGATGCGCCTCGCGAAAGAAACGCCGTCCGATCCCCGTATCCTGCATCGGCTTGCCGTAACCCATTTGAACAT CGGTTCGGCACAGGCGGCGCAAGACACCTACCTTGCCGCCTTGGCTGTCGCCCCGGCGAGCGAAAATCTCCGCCGGGAAT TCGCCGGCCTTCTGCGTGTGATGGAGGCCGGAAAGCTCTATGCGGGCGTGAGCCGCAAGAAGCACAGATTGTCCATGGTT TGCGCGATCAAGAACGAGGCGGACGATCTGCTTGAGTGGCTGCACTTTCACAAGCTGGCCGGCGTTGATCATTTCTACCT GTATGACAATGAAAGCACCGACGAAACACGCGCGATAATCGAATCCTTTCCCTGGCCGGATATGATCACCTACCACTATG TGAAGGGTGAGTTCGGACAGATACGCGCCTTTCATCACGCGATCGACAGCTACCGGAACAGCTCCGAATGGTGCGCGTTC ATCGACGCCGATGAGTTTCTCTATCCCGTCGAGGGCGGGAGCATCAGGGATGTTCTGGACGGAATTCCTTCGGCGCCGGC GGTCGCGGTTCAGTGGCTGAATTTCGGCTCCAATGGCCATGATGCAAAACCAGACGGCCTTTGCATCGAGTCATTCACGC GAAGGGCTCCCGATGATTTCCCGGATCATTATGTGATGAAGTCGATCGTACGCCCTGATGCGATCGTGGCCTATCTTCAC CCCCACCAATCTCTGGTGCTCGGATGTTACGTTCAGGAGGACGGCTCTCCCGTTTTTCCGATCGGCGGCCGATGCTCGGT TCCGAAGCGCAGGAAACTGGCCATCAATCATTACTATACGAAATCTCGACAGCAGCTTCTGAAGAAGCGGGAGCGGGGAA GGCCCTTGGCGGCAGGCGATCCCGAACGCATACGGGCGATGGAGTTCTTTATGCTTCGCGACCGTAACGACGTCGAGGAT CGGACGATCCTGAAGTTCCTGCCTGAGCTCAAGAAGCTGATTCATCGCTAA
Upstream 100 bases:
>100_bases AACACTGCTCTGATCTGGTAAGACCGTATAACAATCGAGTTACATCACCGGGGCTGAGAGCCGATGTCCGTTTTTTTGAA CAAGCCTGGAGCATGACGGG
Downstream 100 bases:
>100_bases GAGTTGCGACGAGAATGCTGCGCGGAAAAGGTGCGGCGTTGACCGCCCTATCACTTCCGTGCGCCCGGCGATTGGGGGCG GGACGCCGAAGTCGTTTATA
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues METETAALTRLGLDRGVEALTANEIEPRLKEFFSGRIANPNPEELMRSVKELEEQFSGYSEYQFARAAVLMQACDFTRAR EILMRLAKETPSDPRILHRLAVTHLNIGSAQAAQDTYLAALAVAPASENLRREFAGLLRVMEAGKLYAGVSRKKHRLSMV CAIKNEADDLLEWLHFHKLAGVDHFYLYDNESTDETRAIIESFPWPDMITYHYVKGEFGQIRAFHHAIDSYRNSSEWCAF IDADEFLYPVEGGSIRDVLDGIPSAPAVAVQWLNFGSNGHDAKPDGLCIESFTRRAPDDFPDHYVMKSIVRPDAIVAYLH PHQSLVLGCYVQEDGSPVFPIGGRCSVPKRRKLAINHYYTKSRQQLLKKRERGRPLAAGDPERIRAMEFFMLRDRNDVED RTILKFLPELKKLIHR
Sequences:
>Translated_416_residues METETAALTRLGLDRGVEALTANEIEPRLKEFFSGRIANPNPEELMRSVKELEEQFSGYSEYQFARAAVLMQACDFTRAR EILMRLAKETPSDPRILHRLAVTHLNIGSAQAAQDTYLAALAVAPASENLRREFAGLLRVMEAGKLYAGVSRKKHRLSMV CAIKNEADDLLEWLHFHKLAGVDHFYLYDNESTDETRAIIESFPWPDMITYHYVKGEFGQIRAFHHAIDSYRNSSEWCAF IDADEFLYPVEGGSIRDVLDGIPSAPAVAVQWLNFGSNGHDAKPDGLCIESFTRRAPDDFPDHYVMKSIVRPDAIVAYLH PHQSLVLGCYVQEDGSPVFPIGGRCSVPKRRKLAINHYYTKSRQQLLKKRERGRPLAAGDPERIRAMEFFMLRDRNDVED RTILKFLPELKKLIHR >Mature_416_residues METETAALTRLGLDRGVEALTANEIEPRLKEFFSGRIANPNPEELMRSVKELEEQFSGYSEYQFARAAVLMQACDFTRAR EILMRLAKETPSDPRILHRLAVTHLNIGSAQAAQDTYLAALAVAPASENLRREFAGLLRVMEAGKLYAGVSRKKHRLSMV CAIKNEADDLLEWLHFHKLAGVDHFYLYDNESTDETRAIIESFPWPDMITYHYVKGEFGQIRAFHHAIDSYRNSSEWCAF IDADEFLYPVEGGSIRDVLDGIPSAPAVAVQWLNFGSNGHDAKPDGLCIESFTRRAPDDFPDHYVMKSIVRPDAIVAYLH PHQSLVLGCYVQEDGSPVFPIGGRCSVPKRRKLAINHYYTKSRQQLLKKRERGRPLAAGDPERIRAMEFFMLRDRNDVED RTILKFLPELKKLIHR
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47395; Mature: 47395
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METETAALTRLGLDRGVEALTANEIEPRLKEFFSGRIANPNPEELMRSVKELEEQFSGYS CCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCH EYQFARAAVLMQACDFTRAREILMRLAKETPSDPRILHRLAVTHLNIGSAQAAQDTYLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH LAVAPASENLRREFAGLLRVMEAGKLYAGVSRKKHRLSMVCAIKNEADDLLEWLHFHKLA HEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCHHHHHHHHHHHHHC GVDHFYLYDNESTDETRAIIESFPWPDMITYHYVKGEFGQIRAFHHAIDSYRNSSEWCAF CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE IDADEFLYPVEGGSIRDVLDGIPSAPAVAVQWLNFGSNGHDAKPDGLCIESFTRRAPDDF EECCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC PDHYVMKSIVRPDAIVAYLHPHQSLVLGCYVQEDGSPVFPIGGRCSVPKRRKLAINHYYT CHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHH KSRQQLLKKRERGRPLAAGDPERIRAMEFFMLRDRNDVEDRTILKFLPELKKLIHR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure METETAALTRLGLDRGVEALTANEIEPRLKEFFSGRIANPNPEELMRSVKELEEQFSGYS CCCHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCH EYQFARAAVLMQACDFTRAREILMRLAKETPSDPRILHRLAVTHLNIGSAQAAQDTYLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH LAVAPASENLRREFAGLLRVMEAGKLYAGVSRKKHRLSMVCAIKNEADDLLEWLHFHKLA HEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEECCCHHHHHHHHHHHHHC GVDHFYLYDNESTDETRAIIESFPWPDMITYHYVKGEFGQIRAFHHAIDSYRNSSEWCAF CCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE IDADEFLYPVEGGSIRDVLDGIPSAPAVAVQWLNFGSNGHDAKPDGLCIESFTRRAPDDF EECCCEEEECCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCC PDHYVMKSIVRPDAIVAYLHPHQSLVLGCYVQEDGSPVFPIGGRCSVPKRRKLAINHYYT CHHHHHHHHCCCCCEEEEECCCCCEEEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHH KSRQQLLKKRERGRPLAAGDPERIRAMEFFMLRDRNDVEDRTILKFLPELKKLIHR HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA