| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is cvrA [H]
Identifier: 75674535
GI number: 75674535
Start: 378252
End: 380045
Strand: Direct
Name: cvrA [H]
Synonym: Nwi_0337
Alternate gene names: 75674535
Gene position: 378252-380045 (Clockwise)
Preceding gene: 75674532
Following gene: 75674547
Centisome position: 11.12
GC content: 64.38
Gene sequence:
>1794_bases ATGGCATCCCTGGATTCGGTCAGTCTGGCCATCCTGCTTGGCGCGATTCTGGTCATGGCCGGAATTCTGTCGAGCCTGCT GGCGTTGCGGTTTGGCGCTCCCTTGCTGCTCGTCTTTCTGTTCATAGGCATGTTGGCGGGTGATTCCGGGCCCGGCGGCC TGTCATTCAGCGACGTCCAGAACACCTATCTCGTGGGGTCGGCCGCGCTGGCGCTGATCCTGTTCGACGGCGGTCTGAAG ACCCGGTTCCAGAGCATCCGCACGGTGCTGGCGCCCTCGATGGTGCTCGCCACGCTGGGCGTGCTGCTGACCGCACTGGT CACGGCGCCGGTCGCCAGATATGCGCTCGATCTCAACTGGACCGAGGCGCTGCTGATCGGCGCGGTCGTCGCCTCCACCG ACGCGGCCGCGGTGTTCCTGCTGGTCCACGCGCAAGGGCTGCGGCTGCGTCCGCGGGTTGGCGCGACGCTGGAGGCGGAG TCCGGCACCAACGACCCCTTCGCGGTGTTTCTCACGCTGATGCTGGTCGAGTTGATCTCGGTCGGCGACAGTTCGGTCTG GCATGTGGTGATCGAGTTTCTCCGGGAGTCCATGCTGGGCGGCATTGTCGGTGTGATCGGCGGACGGCTCGTGGTCGTCG CCCTGAATCGGGTGGCGCTTCCCCAGGGGTTGCATGCGCCGTTCGTCACGACCGCGGCGCTCGTGATTTTCGGGGTGGCG CAGATATTTCATGCATCGGGATTTCTCGCGGTCTATCTCGCGGGAATCATCATCGGCAATCGTCCGACGCGCGCGCACAG TTCGGTGGTGACGTTCCTCGACGCCGCGACCTGGCTGGCGCAGATCGTGATGTTCGTGTTGCTCGGCTTGCTGGTCTCGC CGTACCGCCTGATGGACAGCGCGCTTCCGGCGGTGCTCGTCGCGTTCGTGCTGATGCTGGTGGCGCGGCCGCTCGCGGTC TTTTTATGTCTCGCGCCGTTTCCCTTTAACTGGCGGGAAAAGCTGTTCATTGCCTGGACCGGGCTGCGGGGGGCGGTTGC GATCTTTCTTGCCTCGATTCCGATGCTGGTCGGCCTGTCGAAGGCGTATCTGTATTTCGACGTCGCGTTCGTCGTGGTGA TCATCTCGCTTTTGCTGCAGGGCTGGACGCTTGCTCCGGCCGCCCGGCGACTGCATGTGGCGTTGCCGCGGGCCGACCGG GGGCCGCGCCGCGTCGAACTCGATTTGCCGGGACAGCTCGAACAACAGTTGGTCGGCTATGCGGTACGACCGACAAGCCT GTTTCTTCGGCGCGGGCTGATTCCGTCGTGGTCGAAGCCGACGCTCGTGATTCGCAACGAGAAAATCCTGACGCCCGCTG AGGCCGAACCGATCGAAGCGGGAGACTATCTCTATCTGCTGGCGCCGCCGGAAAAGGCCGAGGCCCTCGACCGCTTTTTT GTCGATATGCAGCCGATGGCGTCGCCGGACCCGCATCTGCTGGGCGACTTCCTGGTCTCCGGCGAAACCAGCCTTGGCGA CATCGCGCAGATCTACGGCGTTTCCGTCGATCCGGCCGCAGCGGAGCTGACGCTGGCGGATTATTTCGATGTCCATCTCG ATCGCGCGCCGAAAGAGGGGGCGACCCTGCCGCTTGACGCCATCGTCCTCGTCGCGCGTAACATCAGCCAGGGCCGCGTC AACGCAGTCGGACTCCGTTTGCCACAAGACGAGGAAAAACGGCCGGCGCCGTCCAGAATGGGTACATTGAAGCAGAAAGC GGCGAAGGCCTGGTCGGCGGTTGCAGGGACCTGA
Upstream 100 bases:
>100_bases CCTGGCGCACAAATAAGGCCGACCGGCAGAAAATCGATTGGCGCGCTGCGGCACCGGCGATAAGGATGAAAGCGCTCGTG TTTACCGCTTCGGACCTCTG
Downstream 100 bases:
>100_bases CCACGCACGGGCAGTTCGGGTTAAGCGGGCAGGACCTCGGGCCCGCCGAACGCCGCGACCCGGCCGCGCTTGAGCATCAC GATGTGCGAAGCGAGCTGGC
Product: potassium/proton antiporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 597; Mature: 596
Protein sequence:
>597_residues MASLDSVSLAILLGAILVMAGILSSLLALRFGAPLLLVFLFIGMLAGDSGPGGLSFSDVQNTYLVGSAALALILFDGGLK TRFQSIRTVLAPSMVLATLGVLLTALVTAPVARYALDLNWTEALLIGAVVASTDAAAVFLLVHAQGLRLRPRVGATLEAE SGTNDPFAVFLTLMLVELISVGDSSVWHVVIEFLRESMLGGIVGVIGGRLVVVALNRVALPQGLHAPFVTTAALVIFGVA QIFHASGFLAVYLAGIIIGNRPTRAHSSVVTFLDAATWLAQIVMFVLLGLLVSPYRLMDSALPAVLVAFVLMLVARPLAV FLCLAPFPFNWREKLFIAWTGLRGAVAIFLASIPMLVGLSKAYLYFDVAFVVVIISLLLQGWTLAPAARRLHVALPRADR GPRRVELDLPGQLEQQLVGYAVRPTSLFLRRGLIPSWSKPTLVIRNEKILTPAEAEPIEAGDYLYLLAPPEKAEALDRFF VDMQPMASPDPHLLGDFLVSGETSLGDIAQIYGVSVDPAAAELTLADYFDVHLDRAPKEGATLPLDAIVLVARNISQGRV NAVGLRLPQDEEKRPAPSRMGTLKQKAAKAWSAVAGT
Sequences:
>Translated_597_residues MASLDSVSLAILLGAILVMAGILSSLLALRFGAPLLLVFLFIGMLAGDSGPGGLSFSDVQNTYLVGSAALALILFDGGLK TRFQSIRTVLAPSMVLATLGVLLTALVTAPVARYALDLNWTEALLIGAVVASTDAAAVFLLVHAQGLRLRPRVGATLEAE SGTNDPFAVFLTLMLVELISVGDSSVWHVVIEFLRESMLGGIVGVIGGRLVVVALNRVALPQGLHAPFVTTAALVIFGVA QIFHASGFLAVYLAGIIIGNRPTRAHSSVVTFLDAATWLAQIVMFVLLGLLVSPYRLMDSALPAVLVAFVLMLVARPLAV FLCLAPFPFNWREKLFIAWTGLRGAVAIFLASIPMLVGLSKAYLYFDVAFVVVIISLLLQGWTLAPAARRLHVALPRADR GPRRVELDLPGQLEQQLVGYAVRPTSLFLRRGLIPSWSKPTLVIRNEKILTPAEAEPIEAGDYLYLLAPPEKAEALDRFF VDMQPMASPDPHLLGDFLVSGETSLGDIAQIYGVSVDPAAAELTLADYFDVHLDRAPKEGATLPLDAIVLVARNISQGRV NAVGLRLPQDEEKRPAPSRMGTLKQKAAKAWSAVAGT >Mature_596_residues ASLDSVSLAILLGAILVMAGILSSLLALRFGAPLLLVFLFIGMLAGDSGPGGLSFSDVQNTYLVGSAALALILFDGGLKT RFQSIRTVLAPSMVLATLGVLLTALVTAPVARYALDLNWTEALLIGAVVASTDAAAVFLLVHAQGLRLRPRVGATLEAES GTNDPFAVFLTLMLVELISVGDSSVWHVVIEFLRESMLGGIVGVIGGRLVVVALNRVALPQGLHAPFVTTAALVIFGVAQ IFHASGFLAVYLAGIIIGNRPTRAHSSVVTFLDAATWLAQIVMFVLLGLLVSPYRLMDSALPAVLVAFVLMLVARPLAVF LCLAPFPFNWREKLFIAWTGLRGAVAIFLASIPMLVGLSKAYLYFDVAFVVVIISLLLQGWTLAPAARRLHVALPRADRG PRRVELDLPGQLEQQLVGYAVRPTSLFLRRGLIPSWSKPTLVIRNEKILTPAEAEPIEAGDYLYLLAPPEKAEALDRFFV DMQPMASPDPHLLGDFLVSGETSLGDIAQIYGVSVDPAAAELTLADYFDVHLDRAPKEGATLPLDAIVLVARNISQGRVN AVGLRLPQDEEKRPAPSRMGTLKQKAAKAWSAVAGT
Specific function: Participates in control of cell volume in low-osmolarity conditions [H]
COG id: COG3263
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081854, Length=571, Percent_Identity=39.5796847635727, Blast_Score=340, Evalue=1e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018421 - InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR016169 - InterPro: IPR006037 - InterPro: IPR005170 [H]
Pfam domain/function: PF03471 CorC_HlyC; PF00999 Na_H_Exchanger; PF02080 TrkA_C [H]
EC number: NA
Molecular weight: Translated: 63693; Mature: 63562
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLDSVSLAILLGAILVMAGILSSLLALRFGAPLLLVFLFIGMLAGDSGPGGLSFSDVQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHCC NTYLVGSAALALILFDGGLKTRFQSIRTVLAPSMVLATLGVLLTALVTAPVARYALDLNW CHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TEALLIGAVVASTDAAAVFLLVHAQGLRLRPRVGATLEAESGTNDPFAVFLTLMLVELIS HHHHHHHHHHHCCCHHHHHHEEECCCCEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHH VGDSSVWHVVIEFLRESMLGGIVGVIGGRLVVVALNRVALPQGLHAPFVTTAALVIFGVA CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHCCCCCCCCHHHHHHHHHHHHHH QIFHASGFLAVYLAGIIIGNRPTRAHSSVVTFLDAATWLAQIVMFVLLGLLVSPYRLMDS HHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH ALPAVLVAFVLMLVARPLAVFLCLAPFPFNWREKLFIAWTGLRGAVAIFLASIPMLVGLS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHH KAYLYFDVAFVVVIISLLLQGWTLAPAARRLHVALPRADRGPRRVELDLPGQLEQQLVGY HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCCEEEECCCCHHHHHHHCE AVRPTSLFLRRGLIPSWSKPTLVIRNEKILTPAEAEPIEAGDYLYLLAPPEKAEALDRFF ECCHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHH VDMQPMASPDPHLLGDFLVSGETSLGDIAQIYGVSVDPAAAELTLADYFDVHLDRAPKEG HCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHEEHHHHHHHHHCCCCCCC ATLPLDAIVLVARNISQGRVNAVGLRLPQDEEKRPAPSRMGTLKQKAAKAWSAVAGT CCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASLDSVSLAILLGAILVMAGILSSLLALRFGAPLLLVFLFIGMLAGDSGPGGLSFSDVQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHCC NTYLVGSAALALILFDGGLKTRFQSIRTVLAPSMVLATLGVLLTALVTAPVARYALDLNW CHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH TEALLIGAVVASTDAAAVFLLVHAQGLRLRPRVGATLEAESGTNDPFAVFLTLMLVELIS HHHHHHHHHHHCCCHHHHHHEEECCCCEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHH VGDSSVWHVVIEFLRESMLGGIVGVIGGRLVVVALNRVALPQGLHAPFVTTAALVIFGVA CCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHCCCCCCCCHHHHHHHHHHHHHH QIFHASGFLAVYLAGIIIGNRPTRAHSSVVTFLDAATWLAQIVMFVLLGLLVSPYRLMDS HHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH ALPAVLVAFVLMLVARPLAVFLCLAPFPFNWREKLFIAWTGLRGAVAIFLASIPMLVGLS HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHH KAYLYFDVAFVVVIISLLLQGWTLAPAARRLHVALPRADRGPRRVELDLPGQLEQQLVGY HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCCEEEECCCCHHHHHHHCE AVRPTSLFLRRGLIPSWSKPTLVIRNEKILTPAEAEPIEAGDYLYLLAPPEKAEALDRFF ECCHHHHHHHHCCCCCCCCCEEEEECCEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHH VDMQPMASPDPHLLGDFLVSGETSLGDIAQIYGVSVDPAAAELTLADYFDVHLDRAPKEG HCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHEEHHHHHHHHHCCCCCCC ATLPLDAIVLVARNISQGRVNAVGLRLPQDEEKRPAPSRMGTLKQKAAKAWSAVAGT CCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA