The gene/protein map for NC_004631 is currently unavailable.
Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is yejA [C]

Identifier: 75674486

GI number: 75674486

Start: 325344

End: 327239

Strand: Direct

Name: yejA [C]

Synonym: Nwi_0288

Alternate gene names: 75674486

Gene position: 325344-327239 (Clockwise)

Preceding gene: 75674485

Following gene: 75674487

Centisome position: 9.56

GC content: 60.71

Gene sequence:

>1896_bases
TTGGCCTTCACACGACGACGACTTCTCCATGGCGGAGCCCTGATCGCAGCCGCCCCCGCAATCAAAGTCCTGACCGGCGC
TTCCTCGATCCAGGCTGCTCATGCGCAGGCCGCACCGGCCGGCCTGAAATGGCGGCACGGACTTTCGCTGTTCGGCGAGG
TGAAATATCCGGAAGGCTTCAAGCATTTCGATTACGTCAATCCGGACGCGCCCAAAGGCGGTCTGGTGCGGCAGATCGCG
ATCGGGACCTTCGACAATTTCAACCCTGTCGTGTCGGGAGTGAAGGGTTCGATCGCATCGGAAGTGCGGCTGGTCTATGA
AGCGTTGACGGCTCCCTCCCTGGACGAGGTTTCAACGGAATACGGCGCGCTGGCCGAGTCGGTCGCTTATCCCGATGATT
TTTCCTTCGTGGTCTACCGGCTGCGGGCGGAGGCGAAGTGGCACGACGGCAAGCCGGTCACGCCCGACGACGTGATTTTC
TCGCTCAACGTGCTGAAGAAGCATCATCCGTTCTATGGAGCCTATTACCGTCACATCACCAAGGTGGAGAAAACCGGCGA
GCGGGACGTGACCTTCACCTTCGATGCGCCGGGCAACCGCGAACTGCCGCAGATCGTCGGGCAACTGATGGTGCTTCCGA
AGCACTGGTGGGAAGGCACCGATGATGCGGGCAGGAAGCGCGATATTTCCGCGACCACGCTGGAGCCGCCGCTCGGCAGC
GGCCCCTACAGGATCAAGCGTTTCGACGCGGCGCGCTCGGTGACTCTCGAGCGGGTCAAGGATTACTGGGGCCGCGATCT
CAATTTCAGTATCGGACACAACAATTTCGACGAGCTGCGCTATGAGTATTTCCGCGACGGCACGGTCGCGCTGGAAGCCT
TCAAAGGCGATCAGGTCGACTGGCGCACCGAAAACAGCGCCAAGAACTGGGCCACGGCTTACGATTTTCCGGCGGTGAAG
GACGGCCGCGTCATTCTGGAGGAATTCCCCAATCGCAATGCCGGCGTGATGCAGGCGTTCGCTCTCAACATCCGCCGCGA
CAAGTTCAGGGATCCTCGCGTGCGGCGGGCGCTGAACTTTGCGTTCAATTTCGAGGAAATGAACAAGCAGCTGTTCTACG
GTCAGTACAAGCGCATCAACAGCTATTTCGAGGGTACCGAACTGGCGTCGAGCGGCCTGCCCGAGGGCAGGGAGCTTGAA
ATCCTTGAAACCGTTCGCGCCGAGGTGCCGGCCGAAGTGTTCACCACGCCTTACAGCAATCCGGTCGGCGGCAACCCCAA
GGCGGTTCGCAACAATCTCCGCGAGGGCATGAAGCTCTTCAAGGAGGCGGGATTTGAGGTGCGCAACCACAAGCTGGTGG
ACGGAAAAACCGGCGCGCCGTTCGAACTGGAGTTATTGTCGGAAGCTCCAAGCACCGAGCGCATCATGCTGTTCTACAAG
CCGTCGCTGGAGCGCATGGGCATTACCGTCAGCGTTCGGACCGTCGATTCGACACAGTACGAGAATCGGATGAGAAGCTG
GGACTTCGACGTCGTCGGCAATCTCTGGATCGAGTCGCTGTCACCCGGTAATGAGCAGAGGGAGTTCTGGGGTTCGCAGG
CCGCGGACATGCCGGGCTCGCGCAACGTCGTCGGCATCAAGAATCCCGCCGTCGACAAGCTGATCGAGCGCGTGATCTTC
GCGAAGGACCGCGCCGACCTCGTGGCAGCCACCAAGGCGCTCGACCGCGTGCTGTTATGGAATCACTACGTGGTGCCGCA
ATTCACCTATCCGTTCCATCGCACGGCCCGCTGGGATCGCTTTGGCCGGCCGGAAAAAATGCCGAAGTACGGCCTTTCCG
CCTTTCCAACGCTGTGGTGGCATGATGCCGGCAAGGCGGCGGGCAAGCGATCTTGA

Upstream 100 bases:

>100_bases
CTCCATTATTCTGATCTGACGCGTGTTCTTCACGCGAACCGGTGCCCGCTTCGCTCGAAAACGCTATAACTCGCCCTGAC
AGTTCGCAGGAATATTCGCA

Downstream 100 bases:

>100_bases
GGAGCAGCGCAAGGATGAGTCGGCCCAGCCGTCGGCAGGTGTTCGGTCTTGGGATCGGTGCGGCAGGCGCGGCATGGCTG
CGGCCGGCCGTCGCCGTGGC

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 630

Protein sequence:

>631_residues
MAFTRRRLLHGGALIAAAPAIKVLTGASSIQAAHAQAAPAGLKWRHGLSLFGEVKYPEGFKHFDYVNPDAPKGGLVRQIA
IGTFDNFNPVVSGVKGSIASEVRLVYEALTAPSLDEVSTEYGALAESVAYPDDFSFVVYRLRAEAKWHDGKPVTPDDVIF
SLNVLKKHHPFYGAYYRHITKVEKTGERDVTFTFDAPGNRELPQIVGQLMVLPKHWWEGTDDAGRKRDISATTLEPPLGS
GPYRIKRFDAARSVTLERVKDYWGRDLNFSIGHNNFDELRYEYFRDGTVALEAFKGDQVDWRTENSAKNWATAYDFPAVK
DGRVILEEFPNRNAGVMQAFALNIRRDKFRDPRVRRALNFAFNFEEMNKQLFYGQYKRINSYFEGTELASSGLPEGRELE
ILETVRAEVPAEVFTTPYSNPVGGNPKAVRNNLREGMKLFKEAGFEVRNHKLVDGKTGAPFELELLSEAPSTERIMLFYK
PSLERMGITVSVRTVDSTQYENRMRSWDFDVVGNLWIESLSPGNEQREFWGSQAADMPGSRNVVGIKNPAVDKLIERVIF
AKDRADLVAATKALDRVLLWNHYVVPQFTYPFHRTARWDRFGRPEKMPKYGLSAFPTLWWHDAGKAAGKRS

Sequences:

>Translated_631_residues
MAFTRRRLLHGGALIAAAPAIKVLTGASSIQAAHAQAAPAGLKWRHGLSLFGEVKYPEGFKHFDYVNPDAPKGGLVRQIA
IGTFDNFNPVVSGVKGSIASEVRLVYEALTAPSLDEVSTEYGALAESVAYPDDFSFVVYRLRAEAKWHDGKPVTPDDVIF
SLNVLKKHHPFYGAYYRHITKVEKTGERDVTFTFDAPGNRELPQIVGQLMVLPKHWWEGTDDAGRKRDISATTLEPPLGS
GPYRIKRFDAARSVTLERVKDYWGRDLNFSIGHNNFDELRYEYFRDGTVALEAFKGDQVDWRTENSAKNWATAYDFPAVK
DGRVILEEFPNRNAGVMQAFALNIRRDKFRDPRVRRALNFAFNFEEMNKQLFYGQYKRINSYFEGTELASSGLPEGRELE
ILETVRAEVPAEVFTTPYSNPVGGNPKAVRNNLREGMKLFKEAGFEVRNHKLVDGKTGAPFELELLSEAPSTERIMLFYK
PSLERMGITVSVRTVDSTQYENRMRSWDFDVVGNLWIESLSPGNEQREFWGSQAADMPGSRNVVGIKNPAVDKLIERVIF
AKDRADLVAATKALDRVLLWNHYVVPQFTYPFHRTARWDRFGRPEKMPKYGLSAFPTLWWHDAGKAAGKRS
>Mature_630_residues
AFTRRRLLHGGALIAAAPAIKVLTGASSIQAAHAQAAPAGLKWRHGLSLFGEVKYPEGFKHFDYVNPDAPKGGLVRQIAI
GTFDNFNPVVSGVKGSIASEVRLVYEALTAPSLDEVSTEYGALAESVAYPDDFSFVVYRLRAEAKWHDGKPVTPDDVIFS
LNVLKKHHPFYGAYYRHITKVEKTGERDVTFTFDAPGNRELPQIVGQLMVLPKHWWEGTDDAGRKRDISATTLEPPLGSG
PYRIKRFDAARSVTLERVKDYWGRDLNFSIGHNNFDELRYEYFRDGTVALEAFKGDQVDWRTENSAKNWATAYDFPAVKD
GRVILEEFPNRNAGVMQAFALNIRRDKFRDPRVRRALNFAFNFEEMNKQLFYGQYKRINSYFEGTELASSGLPEGRELEI
LETVRAEVPAEVFTTPYSNPVGGNPKAVRNNLREGMKLFKEAGFEVRNHKLVDGKTGAPFELELLSEAPSTERIMLFYKP
SLERMGITVSVRTVDSTQYENRMRSWDFDVVGNLWIESLSPGNEQREFWGSQAADMPGSRNVVGIKNPAVDKLIERVIFA
KDRADLVAATKALDRVLLWNHYVVPQFTYPFHRTARWDRFGRPEKMPKYGLSAFPTLWWHDAGKAAGKRS

Specific function: Possible binding-protein with either a transport or enzymatic activity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=589, Percent_Identity=36.8421052631579, Blast_Score=384, Evalue=1e-108,
Organism=Escherichia coli, GI1789966, Length=275, Percent_Identity=23.2727272727273, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 71424; Mature: 71292

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTRRRLLHGGALIAAAPAIKVLTGASSIQAAHAQAAPAGLKWRHGLSLFGEVKYPEGF
CCCCHHHHHHCCCCEECCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
KHFDYVNPDAPKGGLVRQIAIGTFDNFNPVVSGVKGSIASEVRLVYEALTAPSLDEVSTE
CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
YGALAESVAYPDDFSFVVYRLRAEAKWHDGKPVTPDDVIFSLNVLKKHHPFYGAYYRHIT
HHHHHHHHCCCCCHHEEEEEEHHCCCCCCCCCCCHHHHEEEEHHHHHCCCHHHHHHHHHH
KVEKTGERDVTFTFDAPGNRELPQIVGQLMVLPKHWWEGTDDAGRKRDISATTLEPPLGS
HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCC
GPYRIKRFDAARSVTLERVKDYWGRDLNFSIGHNNFDELRYEYFRDGTVALEAFKGDQVD
CCCEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCC
WRTENSAKNWATAYDFPAVKDGRVILEEFPNRNAGVMQAFALNIRRDKFRDPRVRRALNF
CCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
AFNFEEMNKQLFYGQYKRINSYFEGTELASSGLPEGRELEILETVRAEVPAEVFTTPYSN
EECHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHCCHHHHCCCCCC
PVGGNPKAVRNNLREGMKLFKEAGFEVRNHKLVDGKTGAPFELELLSEAPSTERIMLFYK
CCCCCHHHHHHHHHHHHHHHHHCCCEECCCEEECCCCCCCEEEEECCCCCCCCEEEEEEC
PSLERMGITVSVRTVDSTQYENRMRSWDFDVVGNLWIESLSPGNEQREFWGSQAADMPGS
CCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCC
RNVVGIKNPAVDKLIERVIFAKDRADLVAATKALDRVLLWNHYVVPQFTYPFHRTARWDR
CCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHCCCHHH
FGRPEKMPKYGLSAFPTLWWHDAGKAAGKRS
CCCCCCCCCCCCCCCCCCEECCCCCCCCCCC
>Mature Secondary Structure 
AFTRRRLLHGGALIAAAPAIKVLTGASSIQAAHAQAAPAGLKWRHGLSLFGEVKYPEGF
CCCHHHHHHCCCCEECCCHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCC
KHFDYVNPDAPKGGLVRQIAIGTFDNFNPVVSGVKGSIASEVRLVYEALTAPSLDEVSTE
CCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHH
YGALAESVAYPDDFSFVVYRLRAEAKWHDGKPVTPDDVIFSLNVLKKHHPFYGAYYRHIT
HHHHHHHHCCCCCHHEEEEEEHHCCCCCCCCCCCHHHHEEEEHHHHHCCCHHHHHHHHHH
KVEKTGERDVTFTFDAPGNRELPQIVGQLMVLPKHWWEGTDDAGRKRDISATTLEPPLGS
HHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCC
GPYRIKRFDAARSVTLERVKDYWGRDLNFSIGHNNFDELRYEYFRDGTVALEAFKGDQVD
CCCEEEEHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCC
WRTENSAKNWATAYDFPAVKDGRVILEEFPNRNAGVMQAFALNIRRDKFRDPRVRRALNF
CCCCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH
AFNFEEMNKQLFYGQYKRINSYFEGTELASSGLPEGRELEILETVRAEVPAEVFTTPYSN
EECHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHCCHHHHCCCCCC
PVGGNPKAVRNNLREGMKLFKEAGFEVRNHKLVDGKTGAPFELELLSEAPSTERIMLFYK
CCCCCHHHHHHHHHHHHHHHHHCCCEECCCEEECCCCCCCEEEEECCCCCCCCEEEEEEC
PSLERMGITVSVRTVDSTQYENRMRSWDFDVVGNLWIESLSPGNEQREFWGSQAADMPGS
CCCCCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCC
RNVVGIKNPAVDKLIERVIFAKDRADLVAATKALDRVLLWNHYVVPQFTYPFHRTARWDR
CCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCHHCCCHHH
FGRPEKMPKYGLSAFPTLWWHDAGKAAGKRS
CCCCCCCCCCCCCCCCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]