| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is glpK [H]
Identifier: 75674479
GI number: 75674479
Start: 315223
End: 316782
Strand: Direct
Name: glpK [H]
Synonym: Nwi_0281
Alternate gene names: 75674479
Gene position: 315223-316782 (Clockwise)
Preceding gene: 75674477
Following gene: 75674485
Centisome position: 9.27
GC content: 66.54
Gene sequence:
>1560_bases TTGCCACTCTGGCGCGTTGCGCCGCCGCCGCGAGCCCGCAAGTTCGAGAACAACGTCATGGTCACCCACGTCCTCGCCAT TGATCAAGGCACCACATCGTCACGGGCCATCGTGTTTCGCGCCGACCTCACCGTCGCCGCGATCGCGCAGCAGGAATTCC CGCAGCACTTTCCGGCGTCGGGCTGGGTCGAACATGAGCCGGAAGACATCTGGACCTCGACCGTTGCAACCTGCCGGCAG GCGATGAAGAAGGCGGGCGTCACGCCGAAGGACATCGCCGCCATCGGCATCACCAATCAGCGGGAAACCACGGTGGTCTG GGACCGCGTCACCGGAAAGGCGGTGCGTCGCGCCATCGTGTGGCAGGACCGGCGCACTGCGGATGTCTGCGCGCGGCTGA AAGCCGAGGGTCATGAGCCCGCGATATCGGCGAAAACCGGCTTGATCATCGACCCCTATTTTTCCGGCACCAAGGTCGCC TGGATACTCGATTCGGTTCCGGGGGCGCGGGCGCGGGCGATGCGCGGTGAGCTGATGTTCGGGACCGTGGATTGTTATCT CTTGTGGCGGCTGACCGGCGGCAAGGTGCACGCGACCGACGCCACCAATGCGTCGCGCACCATGCTGTTCGACATTCACA CCGGGCACTGGGATGACGCGCTCCTGGATATTCTCCGGATACCGCGTGCGATGCTGCCGGAGGTGAAGGATTCCTCGGCG CATTTCGGCGACAGCGCGCCTGAATTGTTCGGCGCGCCGATCGCGATCCGGGGCATCGCCGGCGATCAGCAGGCGGCGGT GGTGGGTCAGGCGTGCTTCACGCCCGGAATGATCAAGTCGACCTACGGCACCGGCTGCTTCGCGCTGCTCAACACCGGCG CGACGCCGGTCGCCTCGACCAACAAGCTGCTGACCACGATCGCCTATCAACTGAACGGCGAGCGTACCTACGCGCTGGAA GGTTCGATCTTCGTCGCCGGCTCGGCGGTGCAGTGGCTGCGGGACGGCCTGGGCCTCATCAAGAATGCTTCGGAGACGGA GCCGCTGGCGGAGCAGTCCGATCCCGTCCAATCGGTGTATCTTGTGCCGGCGTTCGTCGGCATGGGTGCGCCGTATTGGA ACCCGAATGTGCGTGGCGCGCTGTTCGGACTGACCCGCAACACCGGGCCGGCGGAACTCGCTCACGCGGCGCTGGAAAGC GTCTGCTACCAGACATTTGATCTTTGGGAGGCGATGCGCGCCGATTGGCCGGCCGACGCCGCCGCGCACACCGTGCTGGG GGTCGACGGCGGCATGACGGCCTCCAACTGGACCATGCAGCGTCTCGCGGACCTGCTCGGGGTACCGGTCGACCGGCCGG TCATTCAGGAGACCACGGCGCTGGGCGCGGCGTACCTCGCGGGGCTCTCCGCGGGCGTTTATCCGGAGCCGTCGCGGTTC GCCGACAATTGGCGGCGTGACCGCTGTTTCAAGCCGGCCATGAGCGCCGAGACGCGTGCGCGGAAGCTCAAGGGATGGAC AGCCGCGGTGCGTGGCGTGCTGGCGAGCGACGAGGGGTAA
Upstream 100 bases:
>100_bases GGGCGGAGAAGTCGCGCCAGGCATCTTATCCTTATCGTCCGTCGAAGCGTGAATCAAAACGAAGGCACAAACTTGACCTT GGACAGGCAATCCGCTTGCC
Downstream 100 bases:
>100_bases GGCGGGTATCCACGCGCGCCCGACAGGCGCGGCAAGGGAAGATCGCTCAAGTCCGTAAGGCGACCGCCGCCTTGCGGCGC AGTTGTCGGATTTCCTCGAA
Product: glycerol kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MPLWRVAPPPRARKFENNVMVTHVLAIDQGTTSSRAIVFRADLTVAAIAQQEFPQHFPASGWVEHEPEDIWTSTVATCRQ AMKKAGVTPKDIAAIGITNQRETTVVWDRVTGKAVRRAIVWQDRRTADVCARLKAEGHEPAISAKTGLIIDPYFSGTKVA WILDSVPGARARAMRGELMFGTVDCYLLWRLTGGKVHATDATNASRTMLFDIHTGHWDDALLDILRIPRAMLPEVKDSSA HFGDSAPELFGAPIAIRGIAGDQQAAVVGQACFTPGMIKSTYGTGCFALLNTGATPVASTNKLLTTIAYQLNGERTYALE GSIFVAGSAVQWLRDGLGLIKNASETEPLAEQSDPVQSVYLVPAFVGMGAPYWNPNVRGALFGLTRNTGPAELAHAALES VCYQTFDLWEAMRADWPADAAAHTVLGVDGGMTASNWTMQRLADLLGVPVDRPVIQETTALGAAYLAGLSAGVYPEPSRF ADNWRRDRCFKPAMSAETRARKLKGWTAAVRGVLASDEG
Sequences:
>Translated_519_residues MPLWRVAPPPRARKFENNVMVTHVLAIDQGTTSSRAIVFRADLTVAAIAQQEFPQHFPASGWVEHEPEDIWTSTVATCRQ AMKKAGVTPKDIAAIGITNQRETTVVWDRVTGKAVRRAIVWQDRRTADVCARLKAEGHEPAISAKTGLIIDPYFSGTKVA WILDSVPGARARAMRGELMFGTVDCYLLWRLTGGKVHATDATNASRTMLFDIHTGHWDDALLDILRIPRAMLPEVKDSSA HFGDSAPELFGAPIAIRGIAGDQQAAVVGQACFTPGMIKSTYGTGCFALLNTGATPVASTNKLLTTIAYQLNGERTYALE GSIFVAGSAVQWLRDGLGLIKNASETEPLAEQSDPVQSVYLVPAFVGMGAPYWNPNVRGALFGLTRNTGPAELAHAALES VCYQTFDLWEAMRADWPADAAAHTVLGVDGGMTASNWTMQRLADLLGVPVDRPVIQETTALGAAYLAGLSAGVYPEPSRF ADNWRRDRCFKPAMSAETRARKLKGWTAAVRGVLASDEG >Mature_518_residues PLWRVAPPPRARKFENNVMVTHVLAIDQGTTSSRAIVFRADLTVAAIAQQEFPQHFPASGWVEHEPEDIWTSTVATCRQA MKKAGVTPKDIAAIGITNQRETTVVWDRVTGKAVRRAIVWQDRRTADVCARLKAEGHEPAISAKTGLIIDPYFSGTKVAW ILDSVPGARARAMRGELMFGTVDCYLLWRLTGGKVHATDATNASRTMLFDIHTGHWDDALLDILRIPRAMLPEVKDSSAH FGDSAPELFGAPIAIRGIAGDQQAAVVGQACFTPGMIKSTYGTGCFALLNTGATPVASTNKLLTTIAYQLNGERTYALEG SIFVAGSAVQWLRDGLGLIKNASETEPLAEQSDPVQSVYLVPAFVGMGAPYWNPNVRGALFGLTRNTGPAELAHAALESV CYQTFDLWEAMRADWPADAAAHTVLGVDGGMTASNWTMQRLADLLGVPVDRPVIQETTALGAAYLAGLSAGVYPEPSRFA DNWRRDRCFKPAMSAETRARKLKGWTAAVRGVLASDEG
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI189409120, Length=446, Percent_Identity=45.067264573991, Blast_Score=371, Evalue=1e-103, Organism=Homo sapiens, GI4504007, Length=446, Percent_Identity=45.067264573991, Blast_Score=371, Evalue=1e-103, Organism=Homo sapiens, GI42794763, Length=452, Percent_Identity=44.2477876106195, Blast_Score=369, Evalue=1e-102, Organism=Homo sapiens, GI41393575, Length=446, Percent_Identity=44.6188340807175, Blast_Score=363, Evalue=1e-100, Organism=Homo sapiens, GI88196792, Length=504, Percent_Identity=30.1587301587302, Blast_Score=265, Evalue=1e-70, Organism=Escherichia coli, GI1790361, Length=497, Percent_Identity=52.112676056338, Blast_Score=525, Evalue=1e-150, Organism=Escherichia coli, GI1789987, Length=472, Percent_Identity=27.5423728813559, Blast_Score=120, Evalue=3e-28, Organism=Escherichia coli, GI1787789, Length=510, Percent_Identity=25.2941176470588, Blast_Score=90, Evalue=4e-19, Organism=Escherichia coli, GI1790005, Length=519, Percent_Identity=23.8921001926782, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17535599, Length=497, Percent_Identity=38.6317907444668, Blast_Score=328, Evalue=4e-90, Organism=Caenorhabditis elegans, GI71986140, Length=478, Percent_Identity=24.2677824267782, Blast_Score=168, Evalue=6e-42, Organism=Caenorhabditis elegans, GI71986147, Length=260, Percent_Identity=27.3076923076923, Blast_Score=109, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6321755, Length=485, Percent_Identity=35.8762886597938, Blast_Score=268, Evalue=1e-72, Organism=Drosophila melanogaster, GI17864214, Length=500, Percent_Identity=42.4, Blast_Score=365, Evalue=1e-101, Organism=Drosophila melanogaster, GI24654573, Length=444, Percent_Identity=42.7927927927928, Blast_Score=336, Evalue=3e-92, Organism=Drosophila melanogaster, GI24655555, Length=523, Percent_Identity=37.6673040152964, Blast_Score=333, Evalue=2e-91, Organism=Drosophila melanogaster, GI24655560, Length=523, Percent_Identity=37.6673040152964, Blast_Score=333, Evalue=2e-91, Organism=Drosophila melanogaster, GI24655570, Length=523, Percent_Identity=37.6673040152964, Blast_Score=333, Evalue=2e-91, Organism=Drosophila melanogaster, GI24655574, Length=523, Percent_Identity=37.6673040152964, Blast_Score=333, Evalue=2e-91, Organism=Drosophila melanogaster, GI24655565, Length=523, Percent_Identity=37.6673040152964, Blast_Score=333, Evalue=2e-91, Organism=Drosophila melanogaster, GI19922058, Length=525, Percent_Identity=31.8095238095238, Blast_Score=254, Evalue=1e-67, Organism=Drosophila melanogaster, GI24652871, Length=492, Percent_Identity=32.520325203252, Blast_Score=245, Evalue=4e-65, Organism=Drosophila melanogaster, GI24656367, Length=509, Percent_Identity=28.2907662082515, Blast_Score=180, Evalue=3e-45, Organism=Drosophila melanogaster, GI21357867, Length=521, Percent_Identity=27.447216890595, Blast_Score=175, Evalue=7e-44, Organism=Drosophila melanogaster, GI24656372, Length=346, Percent_Identity=28.3236994219653, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI45552909, Length=293, Percent_Identity=26.962457337884, Blast_Score=93, Evalue=3e-19,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 56103; Mature: 55972
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLWRVAPPPRARKFENNVMVTHVLAIDQGTTSSRAIVFRADLTVAAIAQQEFPQHFPAS CCCCCCCCCCCCHHCCCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCC GWVEHEPEDIWTSTVATCRQAMKKAGVTPKDIAAIGITNQRETTVVWDRVTGKAVRRAIV CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCEEEEEECHHHHHHHHHHH WQDRRTADVCARLKAEGHEPAISAKTGLIIDPYFSGTKVAWILDSVPGARARAMRGELMF HCCCCHHHHHHHHHCCCCCCCEECCCCEEECCCCCCCEEEEEEECCCCHHHHHHCCCEEE GTVDCYLLWRLTGGKVHATDATNASRTMLFDIHTGHWDDALLDILRIPRAMLPEVKDSSA EEEEEEEEEEECCCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHCCHHHCCCCCCCCC HFGDSAPELFGAPIAIRGIAGDQQAAVVGQACFTPGMIKSTYGTGCFALLNTGATPVAST CCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCHHHCCCCCEEEECCCCCCCCCCC NKLLTTIAYQLNGERTYALEGSIFVAGSAVQWLRDGLGLIKNASETEPLAEQSDPVQSVY CHHEEEEEEEECCCEEEEECCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEE LVPAFVGMGAPYWNPNVRGALFGLTRNTGPAELAHAALESVCYQTFDLWEAMRADWPADA HHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AAHTVLGVDGGMTASNWTMQRLADLLGVPVDRPVIQETTALGAAYLAGLSAGVYPEPSRF HHHEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH ADNWRRDRCFKPAMSAETRARKLKGWTAAVRGVLASDEG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PLWRVAPPPRARKFENNVMVTHVLAIDQGTTSSRAIVFRADLTVAAIAQQEFPQHFPAS CCCCCCCCCCCHHCCCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCC GWVEHEPEDIWTSTVATCRQAMKKAGVTPKDIAAIGITNQRETTVVWDRVTGKAVRRAIV CCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCCCCCEEEEEECHHHHHHHHHHH WQDRRTADVCARLKAEGHEPAISAKTGLIIDPYFSGTKVAWILDSVPGARARAMRGELMF HCCCCHHHHHHHHHCCCCCCCEECCCCEEECCCCCCCEEEEEEECCCCHHHHHHCCCEEE GTVDCYLLWRLTGGKVHATDATNASRTMLFDIHTGHWDDALLDILRIPRAMLPEVKDSSA EEEEEEEEEEECCCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHCCHHHCCCCCCCCC HFGDSAPELFGAPIAIRGIAGDQQAAVVGQACFTPGMIKSTYGTGCFALLNTGATPVAST CCCCCCHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCHHHCCCCCEEEECCCCCCCCCCC NKLLTTIAYQLNGERTYALEGSIFVAGSAVQWLRDGLGLIKNASETEPLAEQSDPVQSVY CHHEEEEEEEECCCEEEEECCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEE LVPAFVGMGAPYWNPNVRGALFGLTRNTGPAELAHAALESVCYQTFDLWEAMRADWPADA HHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AAHTVLGVDGGMTASNWTMQRLADLLGVPVDRPVIQETTALGAAYLAGLSAGVYPEPSRF HHHEEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH ADNWRRDRCFKPAMSAETRARKLKGWTAAVRGVLASDEG HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA