| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is 75674473
Identifier: 75674473
GI number: 75674473
Start: 309446
End: 310525
Strand: Direct
Name: 75674473
Synonym: Nwi_0275
Alternate gene names: NA
Gene position: 309446-310525 (Clockwise)
Preceding gene: 75674472
Following gene: 75674476
Centisome position: 9.1
GC content: 63.43
Gene sequence:
>1080_bases ATGGTCGCGTTCCGCATGAAGGACGGTACGGGCAAGATCGAGCTCAGATACACCTACGAGGACACGGATCGCCACGGCAA CGTGCGCATTTACGTGCGCCGGCCCGGCATGAAGAAGGTCCGCCTGCGCAAGACGCCCGGCACCCCGGAATTTCTGGAAG AGTATCGCGACGCTCTCGCGGGACGGCTTGAGCTTCCTTCAGACAAGCGGCCCGTCCGCGTTCCTGCGGGCAAGGGAACG CTGCGCTGGCTCTGCGAGCAATATTACCGCTCGGCGGAATACAAGCGGCTGGAGCCGCGCACGCAGCATGTGCGCCGGCT GATCCTCGATAGCATCTGCAAGCGCGACGGAGATAAGCCGTATGCGCTGATGGAGCCGCGCCACCTGCGCAGGCGCCGCG ATGAAAAATCCGACACACCCGAGGCCGCGAACGGTATTGTGAAAGCGCTCCGCCAGGTTTTCACCTTTGCGCTGGAGAAC GACCTCGCGCAGCGCAATCCGGCAAAGGATGTGCCGTACCTCAAGAGTGGCTCGGAAGGCTTCCACTCGTGGAACATCGA AGAGGTTCGGCAATTCGAAGAACGGCACTCGGTCGGCAGCAAGGCGCGACTTGCCCTCGCCCTGCTGCTCTACACCGGAC AGCGGCGCTCGGATGTCGTCGCGCTCGGCCGGCAGCACATCCGGGACGGATGGTTCACTTTCACGCAGGTGAAGAACCGC AACCGCAAGCCTGTCACTCTCTCGATACCCGTGCGGCCTGAGCTGAAGGCAATCATCGACGCAACGCCTTCGGGCAACCT CACGTACCTTGTGACGGCATTCGGCAAGCCGTTCACAGCAAACGGCTTCGGCAACTGGTTCCGCGAGCGCTGTGATGAGG CGGGTCTGCCGCACTGTTCGGCGCATGGTCTGCGCAAGGCGGCGGCGGCACGTCTTGCCGAACTCGGCGCGAGCGAAAGC GAGATCATGGCCGTCACCGGCCACACGACCTCCAAGGAGATCGTGCGCTACACCCGCGGCGCTCGGCAGAAGGTCCTCGC GGCGAACGCGATGGCGCGCTTCGGCGAAAACAAAGATTGA
Upstream 100 bases:
>100_bases GACCGGATCAGGCTTGACGAGGCGTTCGAGGCGATTCTTGATGATGAGTCCCGTGCCGCCAATCCATGGGACGACGAGGA CCTGTGAGGGAGTGGCCGCC
Downstream 100 bases:
>100_bases ACAAAACTGCCCCACTTTTCCCGGCAGCGGGAAGCGGTGGGGCAAATTCGCGCTCTAAGCGATTGAATTTTCAGGCGGCG ACGCAAGGGATGGTGCCCAG
Product: phage integrase
Products: NA
Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Phage-Related Integrase/Recombinase; Phage-Related Integrase; Integrase/Recombinase; Integrase; Phage Integrase/Recombinase; Site-Specific Recombinase Phage Integrase Family Protein; Integrase/Recombinase Protein; Phage Related Integrase; Tyrosine Recombinase
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MVAFRMKDGTGKIELRYTYEDTDRHGNVRIYVRRPGMKKVRLRKTPGTPEFLEEYRDALAGRLELPSDKRPVRVPAGKGT LRWLCEQYYRSAEYKRLEPRTQHVRRLILDSICKRDGDKPYALMEPRHLRRRRDEKSDTPEAANGIVKALRQVFTFALEN DLAQRNPAKDVPYLKSGSEGFHSWNIEEVRQFEERHSVGSKARLALALLLYTGQRRSDVVALGRQHIRDGWFTFTQVKNR NRKPVTLSIPVRPELKAIIDATPSGNLTYLVTAFGKPFTANGFGNWFRERCDEAGLPHCSAHGLRKAAAARLAELGASES EIMAVTGHTTSKEIVRYTRGARQKVLAANAMARFGENKD
Sequences:
>Translated_359_residues MVAFRMKDGTGKIELRYTYEDTDRHGNVRIYVRRPGMKKVRLRKTPGTPEFLEEYRDALAGRLELPSDKRPVRVPAGKGT LRWLCEQYYRSAEYKRLEPRTQHVRRLILDSICKRDGDKPYALMEPRHLRRRRDEKSDTPEAANGIVKALRQVFTFALEN DLAQRNPAKDVPYLKSGSEGFHSWNIEEVRQFEERHSVGSKARLALALLLYTGQRRSDVVALGRQHIRDGWFTFTQVKNR NRKPVTLSIPVRPELKAIIDATPSGNLTYLVTAFGKPFTANGFGNWFRERCDEAGLPHCSAHGLRKAAAARLAELGASES EIMAVTGHTTSKEIVRYTRGARQKVLAANAMARFGENKD >Mature_359_residues MVAFRMKDGTGKIELRYTYEDTDRHGNVRIYVRRPGMKKVRLRKTPGTPEFLEEYRDALAGRLELPSDKRPVRVPAGKGT LRWLCEQYYRSAEYKRLEPRTQHVRRLILDSICKRDGDKPYALMEPRHLRRRRDEKSDTPEAANGIVKALRQVFTFALEN DLAQRNPAKDVPYLKSGSEGFHSWNIEEVRQFEERHSVGSKARLALALLLYTGQRRSDVVALGRQHIRDGWFTFTQVKNR NRKPVTLSIPVRPELKAIIDATPSGNLTYLVTAFGKPFTANGFGNWFRERCDEAGLPHCSAHGLRKAAAARLAELGASES EIMAVTGHTTSKEIVRYTRGARQKVLAANAMARFGENKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40950; Mature: 40950
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAFRMKDGTGKIELRYTYEDTDRHGNVRIYVRRPGMKKVRLRKTPGTPEFLEEYRDALA CEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH GRLELPSDKRPVRVPAGKGTLRWLCEQYYRSAEYKRLEPRTQHVRRLILDSICKRDGDKP CCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCC YALMEPRHLRRRRDEKSDTPEAANGIVKALRQVFTFALENDLAQRNPAKDVPYLKSGSEG EEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC FHSWNIEEVRQFEERHSVGSKARLALALLLYTGQRRSDVVALGRQHIRDGWFTFTQVKNR CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEHHHHHCC NRKPVTLSIPVRPELKAIIDATPSGNLTYLVTAFGKPFTANGFGNWFRERCDEAGLPHCS CCCCEEEECCCCCCHHHHEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCH AHGLRKAAAARLAELGASESEIMAVTGHTTSKEIVRYTRGARQKVLAANAMARFGENKD HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MVAFRMKDGTGKIELRYTYEDTDRHGNVRIYVRRPGMKKVRLRKTPGTPEFLEEYRDALA CEEEEEECCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHH GRLELPSDKRPVRVPAGKGTLRWLCEQYYRSAEYKRLEPRTQHVRRLILDSICKRDGDKP CCCCCCCCCCCEECCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHCCCCCC YALMEPRHLRRRRDEKSDTPEAANGIVKALRQVFTFALENDLAQRNPAKDVPYLKSGSEG EEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC FHSWNIEEVRQFEERHSVGSKARLALALLLYTGQRRSDVVALGRQHIRDGWFTFTQVKNR CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEHHHHHCC NRKPVTLSIPVRPELKAIIDATPSGNLTYLVTAFGKPFTANGFGNWFRERCDEAGLPHCS CCCCEEEECCCCCCHHHHEECCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCH AHGLRKAAAARLAELGASESEIMAVTGHTTSKEIVRYTRGARQKVLAANAMARFGENKD HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA