| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318790
Identifier: 74318790
GI number: 74318790
Start: 2854796
End: 2854963
Strand: Direct
Name: 74318790
Synonym: Tbd_2772
Alternate gene names: NA
Gene position: 2854796-2854963 (Clockwise)
Preceding gene: 74318789
Following gene: 74318792
Centisome position: 98.11
GC content: 64.29
Gene sequence:
>168_bases ATGTTCGGATGGGCTATCACGTTTCTGGTCATTGCCATTGCGGCAGGCATCTTCGGCTTCGCCGGCCTCGCCGGGACGGC TGCCTGGATCGCAAAGGTCCTGTTCGTCGTGGGTCTGGCGGCCGTCCTCATCATGCTGGTGATGGGTCGCCGGCCGCCCA CGGTCTAG
Upstream 100 bases:
>100_bases CACAATGGATTGATTCTCAAGGGGAAAACGGCCCTGGCACGTCCTCTGCATCGGAACGACGCATCCCTTCGGGGCTCAGT CATTTTGAAAGGAGAACGCC
Downstream 100 bases:
>100_bases TCAATTCGTAACATCCCGGGGAGCTGCGGCTCCCCTTTTTTTCGTCCCGAAGCCGCGCTCGCCGCGCTTGTCGCAAAACG CAGACAAAAAACCGCCGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MFGWAITFLVIAIAAGIFGFAGLAGTAAWIAKVLFVVGLAAVLIMLVMGRRPPTV
Sequences:
>Translated_55_residues MFGWAITFLVIAIAAGIFGFAGLAGTAAWIAKVLFVVGLAAVLIMLVMGRRPPTV >Mature_55_residues MFGWAITFLVIAIAAGIFGFAGLAGTAAWIAKVLFVVGLAAVLIMLVMGRRPPTV
Specific function: Unknown
COG id: COG5487
COG function: function code S; Small integral membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0391 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2772_THIDA (Q3SF89)
Other databases:
- EMBL: CP000116 - RefSeq: YP_316530.1 - STRING: Q3SF89 - GeneID: 3672838 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_2772 - NMPDR: fig|292415.3.peg.2391 - eggNOG: NOG146567 - OMA: MIAWALI - BioCyc: TDEN292415:TBD_2772-MONOMER - HAMAP: MF_01361 - InterPro: IPR009760 - PIRSF: PIRSF036466
Pfam domain/function: PF07043 DUF1328
EC number: NA
Molecular weight: Translated: 5691; Mature: 5691
Theoretical pI: Translated: 12.51; Mature: 12.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1d7c7248)-; HASH(0x1ec18400)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGWAITFLVIAIAAGIFGFAGLAGTAAWIAKVLFVVGLAAVLIMLVMGRRPPTV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH >Mature Secondary Structure MFGWAITFLVIAIAAGIFGFAGLAGTAAWIAKVLFVVGLAAVLIMLVMGRRPPTV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA