| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318768
Identifier: 74318768
GI number: 74318768
Start: 2828818
End: 2831139
Strand: Direct
Name: 74318768
Synonym: Tbd_2750
Alternate gene names: NA
Gene position: 2828818-2831139 (Clockwise)
Preceding gene: 74318767
Following gene: 74318769
Centisome position: 97.22
GC content: 73.26
Gene sequence:
>2322_bases TTGAGCCGCAGCGGGCGACTCGCGCTTGCCGTGTGGCTCGTTTTCCTCGCGGCCTGCGGCTGGCTCGCGACCCGCGCCGA CTACACGGCCGACCTCTCGGCCTTCCTGCCGCGCGCGCCGACGCCCGAACAGCAATTGCTCGTCGACCAGCTGAAGTCGG GCGTCGCCTCGCGCCTGATCCTGATCGGCATCGAAGGCGGCGACAGCACCGCGCGCGCGCGCGCCTCGCGCGAACTCGCG GCGAGGCTGCGCGCCGACCCGCGTTTCCTGCACATCGCGAACGGCGAGACGCCGGCACTGCAACGCGATCGCGAAATCCT GTTCGCGCATCGCTACGTGCTGAGCCCGGCGGTGGACGCCGGGCGCTTCACGGCCGAAGGGCTGCGCGCCGGCGTCGAGG ACAGCCTCGGCCTGCTCGCAACCTCGACCGGGCTCGTCAGCAAGGCCTTGTTGCCGCGCGACCCGACCGGCGAATTCCTC CAGGTGCTCGACGCGCTCGAAGACGGACAGCAGCCCCGCCTTGTCGACGGGACGTGGGCCTCGCGCGACGGCACGCGCGC GCTGCTCCTCGCACGCACCCGCGCCGAAGGCGCCGACACCGATGGACAGGAGCAGGCTGTCGACGCCATCCGCAGCGCAT TCGCGGCCGTAGGCGCGCCGCCGCTGCGCCTCGCGATGACCGGCCCCGGACCGTTCTCGGTAACCGCGCGCGCGACGATC AAGGACGAGGTCACGCTGCTCTCGGGCCTCGGCGCCCTTGCGATCGTCAGCCTGCTGCTCGCGGTGTATCGCTCGCCGCA CGCGCTGCTGCTGAGTCTCGTGCCCGTGGTCTCGGGGGCGCTCGCCGGGGTCGCCGCGGTGAGCCTCGGCTTCGGCGTCG TGCACGGCGTCACGCTCGGCTTCGGCACGGCGCTGATCGGCGAAGCGGTCGACTATGCGATCTACCTGCTCATGCAATCG CGGCAGGCAGCGGCAGACCCGCGCGCGTCGACGAAGGCATTCTGGCCGACGGTGCGGATCGGCGTGCTGACCTCGGTCTT CGGCTTCGCCTCGCTGCTTTTCTCCGGCTTTCCCGGCCTCGCCCAGCTCGGCCTTTACGCGATCGCAGGGCTCGCCGCGG CCGCACTCGTCACGCGCTTCGTGCTGCCTCATCTGGTACCGGCGACGCTCGAGCCGCCCGCCGTCGATCGGCTCGGGCAG CGCCTGCTCGGCTGGAGCGAACGGGCACCACGGCTGCGCGGCATCGTGCTCGCTCTCTTCGTCGCCGCCTGTGGCGTCAT CGCATTCGAGCACGGCGGTATGTGGAACCGCGAGCTCGCGGCCCTGAGCCCGGTTCCGGCCGCCGACCAGGCGCTCGATG CAGCGATGCGGGCCGACCTCGGTGCCCCCGACGTCGCCCACCTCGTGATCGTGAGCGCGCCGAGCGCGGAGGCCGCGCTC GCGGCGAGCGAACGCGCGGCGCGCGCGCTCGACGCGCTCGTCGCCGCCGGCACGATCGCGGGCTACGAAAGCCCGGCGCG CTACCTGCCGAGCGCGGCGACGCAGCGCGCGCGGCTGGCCGCGCTGCCGGACGACGCACAATTGCGCCAGCGCTTCGCCG CCGCGGCGGCCGGCCTGCCGCTGCGCGCCGAGCGTTTCGAGCCTTTCTTCGCGGACGTCGCGGCTGCGCGGCACGCGGCG TCCTTGACCCGTAGCGATCTCGAAGGCAGCGCGCTGGCCGCAGGCGTCGACGCCCTCCTGGTGCGCTCGTCCGGCGGCTG GACCGCCCTCATGCCCCTGCGCGCCGCGAACGGCGCGCTCGACGCAGCCGCGGTCAAGGCCGCGCTCGCCGCGGCCGGCG CCCACGACGCCCATTTCGTCGATCTCAAGCGCGAGTCCGATCGCCTGCACAGCGGCTATCTGCGCGAAGCGAGCCTGCTG TCGCTCGCTGGCCTCGCGGCGATCCTCGCGCTGCTCGGGGTCGTCACGCGTTCGCCGCGCCGCGTGTTCCATATCGTCGC GCCGCTCGCGGCGGCCGTCGCCGTCGTCGTCGCCGGCCTCGTGCTTGCCGGGCGGCCGCTCATCATCCTGCACCTGGTCG GCATGCTGCTGGTGGTCGCGGTCGGCTCGAACTACGCCCTGTTCTTCGACCAGGGTGCCGCCGCGGGCGGTGTCCAGGCG CGCACGCTGGTTTCGCTCTTGCTCGCCAGCGCGACGACGGTCGCGGGCTTCGGCGTGCTGGCGTTTTCGAGCGTGCCGGT GCTCAACGCGATCGGCACGACGGTCGGCCCCGGGGTGGTCCTCGCCCTGGTCTTTTCCGCGATCCTCGCGCGCCGCCCAT GA
Upstream 100 bases:
>100_bases GTATCCGCATCGACGGCGCCGAGGGTGAGGTCCGCACGGTCGAGATCGTGCAGGCCGACGGCGACCGCTCGGTCATGACG GTCGAGAAGGCGGCCGCCCC
Downstream 100 bases:
>100_bases ACCCGCCGCCGCTCCATGCTCCACGTTCCTGGCGCCCGGCGCCGCTTCTGTGGACGACTTTCATGCTGCACGGCGGCGTC ATCGGCTGGCTGCTCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Mmpl Exporter Transmembrane Protein; XanthomoNADin Exporter; MMPL Domain Protein; Exporter TRANSMEMBRANE PROTEIN; Phosphoglucomutase/Phosphomannomutase Alpha/Beta/Subunit
Number of amino acids: Translated: 773; Mature: 772
Protein sequence:
>773_residues MSRSGRLALAVWLVFLAACGWLATRADYTADLSAFLPRAPTPEQQLLVDQLKSGVASRLILIGIEGGDSTARARASRELA ARLRADPRFLHIANGETPALQRDREILFAHRYVLSPAVDAGRFTAEGLRAGVEDSLGLLATSTGLVSKALLPRDPTGEFL QVLDALEDGQQPRLVDGTWASRDGTRALLLARTRAEGADTDGQEQAVDAIRSAFAAVGAPPLRLAMTGPGPFSVTARATI KDEVTLLSGLGALAIVSLLLAVYRSPHALLLSLVPVVSGALAGVAAVSLGFGVVHGVTLGFGTALIGEAVDYAIYLLMQS RQAAADPRASTKAFWPTVRIGVLTSVFGFASLLFSGFPGLAQLGLYAIAGLAAAALVTRFVLPHLVPATLEPPAVDRLGQ RLLGWSERAPRLRGIVLALFVAACGVIAFEHGGMWNRELAALSPVPAADQALDAAMRADLGAPDVAHLVIVSAPSAEAAL AASERAARALDALVAAGTIAGYESPARYLPSAATQRARLAALPDDAQLRQRFAAAAAGLPLRAERFEPFFADVAAARHAA SLTRSDLEGSALAAGVDALLVRSSGGWTALMPLRAANGALDAAAVKAALAAAGAHDAHFVDLKRESDRLHSGYLREASLL SLAGLAAILALLGVVTRSPRRVFHIVAPLAAAVAVVVAGLVLAGRPLIILHLVGMLLVVAVGSNYALFFDQGAAAGGVQA RTLVSLLLASATTVAGFGVLAFSSVPVLNAIGTTVGPGVVLALVFSAILARRP
Sequences:
>Translated_773_residues MSRSGRLALAVWLVFLAACGWLATRADYTADLSAFLPRAPTPEQQLLVDQLKSGVASRLILIGIEGGDSTARARASRELA ARLRADPRFLHIANGETPALQRDREILFAHRYVLSPAVDAGRFTAEGLRAGVEDSLGLLATSTGLVSKALLPRDPTGEFL QVLDALEDGQQPRLVDGTWASRDGTRALLLARTRAEGADTDGQEQAVDAIRSAFAAVGAPPLRLAMTGPGPFSVTARATI KDEVTLLSGLGALAIVSLLLAVYRSPHALLLSLVPVVSGALAGVAAVSLGFGVVHGVTLGFGTALIGEAVDYAIYLLMQS RQAAADPRASTKAFWPTVRIGVLTSVFGFASLLFSGFPGLAQLGLYAIAGLAAAALVTRFVLPHLVPATLEPPAVDRLGQ RLLGWSERAPRLRGIVLALFVAACGVIAFEHGGMWNRELAALSPVPAADQALDAAMRADLGAPDVAHLVIVSAPSAEAAL AASERAARALDALVAAGTIAGYESPARYLPSAATQRARLAALPDDAQLRQRFAAAAAGLPLRAERFEPFFADVAAARHAA SLTRSDLEGSALAAGVDALLVRSSGGWTALMPLRAANGALDAAAVKAALAAAGAHDAHFVDLKRESDRLHSGYLREASLL SLAGLAAILALLGVVTRSPRRVFHIVAPLAAAVAVVVAGLVLAGRPLIILHLVGMLLVVAVGSNYALFFDQGAAAGGVQA RTLVSLLLASATTVAGFGVLAFSSVPVLNAIGTTVGPGVVLALVFSAILARRP >Mature_772_residues SRSGRLALAVWLVFLAACGWLATRADYTADLSAFLPRAPTPEQQLLVDQLKSGVASRLILIGIEGGDSTARARASRELAA RLRADPRFLHIANGETPALQRDREILFAHRYVLSPAVDAGRFTAEGLRAGVEDSLGLLATSTGLVSKALLPRDPTGEFLQ VLDALEDGQQPRLVDGTWASRDGTRALLLARTRAEGADTDGQEQAVDAIRSAFAAVGAPPLRLAMTGPGPFSVTARATIK DEVTLLSGLGALAIVSLLLAVYRSPHALLLSLVPVVSGALAGVAAVSLGFGVVHGVTLGFGTALIGEAVDYAIYLLMQSR QAAADPRASTKAFWPTVRIGVLTSVFGFASLLFSGFPGLAQLGLYAIAGLAAAALVTRFVLPHLVPATLEPPAVDRLGQR LLGWSERAPRLRGIVLALFVAACGVIAFEHGGMWNRELAALSPVPAADQALDAAMRADLGAPDVAHLVIVSAPSAEAALA ASERAARALDALVAAGTIAGYESPARYLPSAATQRARLAALPDDAQLRQRFAAAAAGLPLRAERFEPFFADVAAARHAAS LTRSDLEGSALAAGVDALLVRSSGGWTALMPLRAANGALDAAAVKAALAAAGAHDAHFVDLKRESDRLHSGYLREASLLS LAGLAAILALLGVVTRSPRRVFHIVAPLAAAVAVVVAGLVLAGRPLIILHLVGMLLVVAVGSNYALFFDQGAAAGGVQAR TLVSLLLASATTVAGFGVLAFSSVPVLNAIGTTVGPGVVLALVFSAILARRP
Specific function: Unknown
COG id: COG4258
COG function: function code R; Predicted exporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79671; Mature: 79540
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSGRLALAVWLVFLAACGWLATRADYTADLSAFLPRAPTPEQQLLVDQLKSGVASRLI CCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEE LIGIEGGDSTARARASRELAARLRADPRFLHIANGETPALQRDREILFAHRYVLSPAVDA EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC GRFTAEGLRAGVEDSLGLLATSTGLVSKALLPRDPTGEFLQVLDALEDGQQPRLVDGTWA CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEECCCCC SRDGTRALLLARTRAEGADTDGQEQAVDAIRSAFAAVGAPPLRLAMTGPGPFSVTARATI CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHH KDEVTLLSGLGALAIVSLLLAVYRSPHALLLSLVPVVSGALAGVAAVSLGFGVVHGVTLG HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTALIGEAVDYAIYLLMQSRQAAADPRASTKAFWPTVRIGVLTSVFGFASLLFSGFPGL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCHH AQLGLYAIAGLAAAALVTRFVLPHLVPATLEPPAVDRLGQRLLGWSERAPRLRGIVLALF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH VAACGVIAFEHGGMWNRELAALSPVPAADQALDAAMRADLGAPDVAHLVIVSAPSAEAAL HHHHHHHHEECCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHH AASERAARALDALVAAGTIAGYESPARYLPSAATQRARLAALPDDAQLRQRFAAAAAGLP HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHEECCCCHHHHHHHHHHHHCCCC LRAERFEPFFADVAAARHAASLTRSDLEGSALAAGVDALLVRSSGGWTALMPLRAANGAL CCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHEEEEECCCCCEEEEEEHHCCCCH DAAAVKAALAAAGAHDAHFVDLKRESDRLHSGYLREASLLSLAGLAAILALLGVVTRSPR HHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RVFHIVAPLAAAVAVVVAGLVLAGRPLIILHLVGMLLVVAVGSNYALFFDQGAAAGGVQA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH RTLVSLLLASATTVAGFGVLAFSSVPVLNAIGTTVGPGVVLALVFSAILARRP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRSGRLALAVWLVFLAACGWLATRADYTADLSAFLPRAPTPEQQLLVDQLKSGVASRLI CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCEEE LIGIEGGDSTARARASRELAARLRADPRFLHIANGETPALQRDREILFAHRYVLSPAVDA EEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCC GRFTAEGLRAGVEDSLGLLATSTGLVSKALLPRDPTGEFLQVLDALEDGQQPRLVDGTWA CHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEECCCCC SRDGTRALLLARTRAEGADTDGQEQAVDAIRSAFAAVGAPPLRLAMTGPGPFSVTARATI CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEHH KDEVTLLSGLGALAIVSLLLAVYRSPHALLLSLVPVVSGALAGVAAVSLGFGVVHGVTLG HHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGTALIGEAVDYAIYLLMQSRQAAADPRASTKAFWPTVRIGVLTSVFGFASLLFSGFPGL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHCCCHH AQLGLYAIAGLAAAALVTRFVLPHLVPATLEPPAVDRLGQRLLGWSERAPRLRGIVLALF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH VAACGVIAFEHGGMWNRELAALSPVPAADQALDAAMRADLGAPDVAHLVIVSAPSAEAAL HHHHHHHHEECCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHH AASERAARALDALVAAGTIAGYESPARYLPSAATQRARLAALPDDAQLRQRFAAAAAGLP HHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHEECCCCHHHHHHHHHHHHCCCC LRAERFEPFFADVAAARHAASLTRSDLEGSALAAGVDALLVRSSGGWTALMPLRAANGAL CCHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCHHEEEEECCCCCEEEEEEHHCCCCH DAAAVKAALAAAGAHDAHFVDLKRESDRLHSGYLREASLLSLAGLAAILALLGVVTRSPR HHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RVFHIVAPLAAAVAVVVAGLVLAGRPLIILHLVGMLLVVAVGSNYALFFDQGAAAGGVQA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHH RTLVSLLLASATTVAGFGVLAFSSVPVLNAIGTTVGPGVVLALVFSAILARRP HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA