| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
Click here to switch to the map view.
The map label for this gene is ygfE [C]
Identifier: 74318741
GI number: 74318741
Start: 2802140
End: 2802442
Strand: Direct
Name: ygfE [C]
Synonym: Tbd_2723
Alternate gene names: 74318741
Gene position: 2802140-2802442 (Clockwise)
Preceding gene: 74318740
Following gene: 74318742
Centisome position: 96.3
GC content: 65.35
Gene sequence:
>303_bases ATGGCCGGTCCGCGCTCGATCGAAATCCACATCCTGGGCCGCGCCTACAAGGTCGCGTGCTCGCGCGAGGAGGAATCGGC GCTGATCGCCGCCGCCGACTATCTCGACGAGAAGATGCGCGACATCCGCGACAAGAGCACGGTGATCGGCGCCGAGCGCA TCGCGATCATGGCCGGGCTCAACCTCGCCCACGAGATGCTGACCCAAGGAGGCGCCGGCGTCGCCGACGACGCACGCGAT CGGGTCGCGCACTGCAACGCGCTGCTCGATTCCGTACTGGAAGATCAGGACAAACTCTTCTAA
Upstream 100 bases:
>100_bases TGCTGGCCGCGCAGCAGGACAACAAGCAGCTGGCGACCCGGCTGGATACCGCCAAGGCGCGGCTGCAGGCCCTGCTCGAA ACCCTGCCGGAGGATGTCTG
Downstream 100 bases:
>100_bases ACTGTTCTGACTCCCTGCAGTGTTCGAGGCTGGCTGCAATTTCTCTGAACCAATGCACTCGTGCACGGCTGCCGTCTATT CCGATGCGGGTGTGCGCGTG
Product: cell division protein ZapA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MAGPRSIEIHILGRAYKVACSREEESALIAAADYLDEKMRDIRDKSTVIGAERIAIMAGLNLAHEMLTQGGAGVADDARD RVAHCNALLDSVLEDQDKLF
Sequences:
>Translated_100_residues MAGPRSIEIHILGRAYKVACSREEESALIAAADYLDEKMRDIRDKSTVIGAERIAIMAGLNLAHEMLTQGGAGVADDARD RVAHCNALLDSVLEDQDKLF >Mature_99_residues AGPRSIEIHILGRAYKVACSREEESALIAAADYLDEKMRDIRDKSTVIGAERIAIMAGLNLAHEMLTQGGAGVADDARDR VAHCNALLDSVLEDQDKLF
Specific function: Unknown
COG id: COG3027
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10869; Mature: 10737
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGPRSIEIHILGRAYKVACSREEESALIAAADYLDEKMRDIRDKSTVIGAERIAIMAGL CCCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLAHEMLTQGGAGVADDARDRVAHCNALLDSVLEDQDKLF HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AGPRSIEIHILGRAYKVACSREEESALIAAADYLDEKMRDIRDKSTVIGAERIAIMAGL CCCCEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLAHEMLTQGGAGVADDARDRVAHCNALLDSVLEDQDKLF HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA