| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318709
Identifier: 74318709
GI number: 74318709
Start: 2771089
End: 2772390
Strand: Direct
Name: 74318709
Synonym: Tbd_2691
Alternate gene names: NA
Gene position: 2771089-2772390 (Clockwise)
Preceding gene: 74318708
Following gene: 74318713
Centisome position: 95.23
GC content: 66.82
Gene sequence:
>1302_bases ATGTTCACCCCTCTCGCTTCCCGCCAAACCACGGCTGCCGTCGCCTTGCTGGTCGCCATCTCGCCGGTCTGGGCCGACGA CCGGCATGACCACGACGATCGCCGCGGCGCCGTTGGCAACGCGCACAGCGTCCAGCTCGGCCCGCGTCCCTTCTTCCTCG TCGACGACATGCAGGGCGGTGCGCTCAAGCGCACGCTGCAGAAATGCGGCGACGGCCCCTTCCGCAAAAGCGACTTCTCG ATCGGGCACCGCGGCGCGCCTCTGCAGTTTCCCGAGCACACGCGGGAATCCTACGAAGCCGCCGCGCGCATGGGCGCCGG CATCGTCGAATGCGACGTGACCTTCACTCGCGACAAGCAGCTGGTATGCCGCCACGCACAGAACGATCTGCACACCACCA CCGACATCCTCGCGACGCCCTTGGCCGCCAAGTGCACCAAGCCCTTCACGCCGGCCGTCTTCGACGCCGACGGCGCACTG TTGACGCCGGCATCGGCCGAGTGCCGCACCAGCGACATCACGCTGACCGAATTCAAGACGCTCCGCGGCAAGATGGACGC GGCGAACCCGCGCGCGACCACCGTTGCCGAGTATCTGAACGGCACCGCCGCGTTCCGCACCGACCTCTACGCCGGCCCGA CGAGCGGTACGCTCATGACCCACGCCGAAAGCATCGCGCTGTTCAAGAAACTGGGCGTGAAAATGACCCCCGAGCTGAAG AGCGCGAGCGTGCCCATGCCCTACGACAGCGACGGCGACGGCGTCGGCGACTACACGCAGGAGACCTATGCGCAGCAGAT GATCGACGAGTACAAGGCCGCCGGCGTGCGCCCGCAGCACGTTTGGGCACAGTCCTTCGACATCCGCGACATCCGCTACT GGATCGCGCACGAGCCCGAATTCGGCAAGCAGGCGGTCTATCTGGACGACGCAGAGACCGTCGCCGAGTTGCCGGGCGCG GCCGAACTGCACGGCTACAAGGACGAAGGCATCAACATCGTCGCGCCGCCGCTGTTCGCGCTGCTTGACGTCGACGGCGG CGGCAGGATCGTCCCCTCGGCTTACGCGCAGAACGCCCGCGCCGCCGGGCTCGATATAATCACCTGGACGCTCGAGCGCT CGGGCATCCTGGCCGACGGCGACAACGGCTTCTACTACCAAACCATCGACCCGGCGATCGCACGCGAAGGCGACGTGATG ACCGTGCTCGACGTACTCGCGAAGGAGGTGGGCGTCCTCGGCGTCTTCAGCGACTGGCCGGCCACGACGACCTACTACGC CAGCTGCATGAACCTCGAATAG
Upstream 100 bases:
>100_bases GACCCGGCGCACGTCGCGTCATCCTGCTGACAGATTCCGGGAATACGGTGGCAGCGTCGGCCCCGCCGACCCCTTCCCGC CCATCTTCACAGGAGCCCGC
Downstream 100 bases:
>100_bases CCGCGACGCCCATCCACAAAAAACCGGCCGCGATTGGCCGGTTTTTTGTCTGTGCCTGTCAGGATCAGTGCGTCACGCCC CAGTCTACGAGTCCGCTGTA
Product: glycerophosphoryl diester phosphodiesterase family protein
Products: NA
Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphoryl Diester Phosphodiesterase Family; Glycerophosphodiesterase
Number of amino acids: Translated: 433; Mature: 433
Protein sequence:
>433_residues MFTPLASRQTTAAVALLVAISPVWADDRHDHDDRRGAVGNAHSVQLGPRPFFLVDDMQGGALKRTLQKCGDGPFRKSDFS IGHRGAPLQFPEHTRESYEAAARMGAGIVECDVTFTRDKQLVCRHAQNDLHTTTDILATPLAAKCTKPFTPAVFDADGAL LTPASAECRTSDITLTEFKTLRGKMDAANPRATTVAEYLNGTAAFRTDLYAGPTSGTLMTHAESIALFKKLGVKMTPELK SASVPMPYDSDGDGVGDYTQETYAQQMIDEYKAAGVRPQHVWAQSFDIRDIRYWIAHEPEFGKQAVYLDDAETVAELPGA AELHGYKDEGINIVAPPLFALLDVDGGGRIVPSAYAQNARAAGLDIITWTLERSGILADGDNGFYYQTIDPAIAREGDVM TVLDVLAKEVGVLGVFSDWPATTTYYASCMNLE
Sequences:
>Translated_433_residues MFTPLASRQTTAAVALLVAISPVWADDRHDHDDRRGAVGNAHSVQLGPRPFFLVDDMQGGALKRTLQKCGDGPFRKSDFS IGHRGAPLQFPEHTRESYEAAARMGAGIVECDVTFTRDKQLVCRHAQNDLHTTTDILATPLAAKCTKPFTPAVFDADGAL LTPASAECRTSDITLTEFKTLRGKMDAANPRATTVAEYLNGTAAFRTDLYAGPTSGTLMTHAESIALFKKLGVKMTPELK SASVPMPYDSDGDGVGDYTQETYAQQMIDEYKAAGVRPQHVWAQSFDIRDIRYWIAHEPEFGKQAVYLDDAETVAELPGA AELHGYKDEGINIVAPPLFALLDVDGGGRIVPSAYAQNARAAGLDIITWTLERSGILADGDNGFYYQTIDPAIAREGDVM TVLDVLAKEVGVLGVFSDWPATTTYYASCMNLE >Mature_433_residues MFTPLASRQTTAAVALLVAISPVWADDRHDHDDRRGAVGNAHSVQLGPRPFFLVDDMQGGALKRTLQKCGDGPFRKSDFS IGHRGAPLQFPEHTRESYEAAARMGAGIVECDVTFTRDKQLVCRHAQNDLHTTTDILATPLAAKCTKPFTPAVFDADGAL LTPASAECRTSDITLTEFKTLRGKMDAANPRATTVAEYLNGTAAFRTDLYAGPTSGTLMTHAESIALFKKLGVKMTPELK SASVPMPYDSDGDGVGDYTQETYAQQMIDEYKAAGVRPQHVWAQSFDIRDIRYWIAHEPEFGKQAVYLDDAETVAELPGA AELHGYKDEGINIVAPPLFALLDVDGGGRIVPSAYAQNARAAGLDIITWTLERSGILADGDNGFYYQTIDPAIAREGDVM TVLDVLAKEVGVLGVFSDWPATTTYYASCMNLE
Specific function: Unknown
COG id: COG0584
COG function: function code C; Glycerophosphoryl diester phosphodiesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46975; Mature: 46975
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTPLASRQTTAAVALLVAISPVWADDRHDHDDRRGAVGNAHSVQLGPRPFFLVDDMQGG CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEECCCCEEEEECCCCC ALKRTLQKCGDGPFRKSDFSIGHRGAPLQFPEHTRESYEAAARMGAGIVECDVTFTRDKQ HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCHH LVCRHAQNDLHTTTDILATPLAAKCTKPFTPAVFDADGALLTPASAECRTSDITLTEFKT HHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCCEECCCCCEECCCCCCCCCCCEEHHHHHH LRGKMDAANPRATTVAEYLNGTAAFRTDLYAGPTSGTLMTHAESIALFKKLGVKMTPELK HHCCCCCCCCHHHHHHHHHCCCHHEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCC SASVPMPYDSDGDGVGDYTQETYAQQMIDEYKAAGVRPQHVWAQSFDIRDIRYWIAHEPE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEECCCC FGKQAVYLDDAETVAELPGAAELHGYKDEGINIVAPPLFALLDVDGGGRIVPSAYAQNAR CCCEEEEECCHHHHHHCCCCHHCCCCCCCCCEEEECCEEEEEECCCCCEECCHHHHCCCC AAGLDIITWTLERSGILADGDNGFYYQTIDPAIAREGDVMTVLDVLAKEVGVLGVFSDWP CCCCEEEEEEEECCCEEEECCCCEEEEECCHHHHCCCCHHHHHHHHHHHHCEEEEECCCC ATTTYYASCMNLE CCHHHHHEEECCC >Mature Secondary Structure MFTPLASRQTTAAVALLVAISPVWADDRHDHDDRRGAVGNAHSVQLGPRPFFLVDDMQGG CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEECCCCEEEEECCCCC ALKRTLQKCGDGPFRKSDFSIGHRGAPLQFPEHTRESYEAAARMGAGIVECDVTFTRDKQ HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCHH LVCRHAQNDLHTTTDILATPLAAKCTKPFTPAVFDADGALLTPASAECRTSDITLTEFKT HHHHHHCCCHHHHHHHHHCCHHHHCCCCCCCCEECCCCCEECCCCCCCCCCCEEHHHHHH LRGKMDAANPRATTVAEYLNGTAAFRTDLYAGPTSGTLMTHAESIALFKKLGVKMTPELK HHCCCCCCCCHHHHHHHHHCCCHHEECCCCCCCCCCEEHHHHHHHHHHHHCCCCCCCCCC SASVPMPYDSDGDGVGDYTQETYAQQMIDEYKAAGVRPQHVWAQSFDIRDIRYWIAHEPE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCEEEEEECCCC FGKQAVYLDDAETVAELPGAAELHGYKDEGINIVAPPLFALLDVDGGGRIVPSAYAQNAR CCCEEEEECCHHHHHHCCCCHHCCCCCCCCCEEEECCEEEEEECCCCCEECCHHHHCCCC AAGLDIITWTLERSGILADGDNGFYYQTIDPAIAREGDVMTVLDVLAKEVGVLGVFSDWP CCCCEEEEEEEECCCEEEECCCCEEEEECCHHHHCCCCHHHHHHHHHHHHCEEEEECCCC ATTTYYASCMNLE CCHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA