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The map label for this gene is recF [C]

Identifier: 74318701

GI number: 74318701

Start: 2759441

End: 2760877

Strand: Direct

Name: recF [C]

Synonym: Tbd_2683

Alternate gene names: 74318701

Gene position: 2759441-2760877 (Clockwise)

Preceding gene: 74318700

Following gene: 74318702

Centisome position: 94.83

GC content: 51.08

Gene sequence:

>1437_bases
ATGCAAATTAACCGCCTTACGCTGACCAATTTTCGCGGGTTGACGAATTCCGTCTTGGACTTTGCGCCCGGGTTCAATCT
GGTCGTCGGTGTAAACGGCGTCGGCAAGACGGCTGTCCTTGAGGCCCTGCGAATTCTCTTAGCGAAAGCCCTGCCGTCAT
TTGCGGAGGTCAGAGGATTTCCGGGAATTGGCCTTACAAAAGATGACATCACCATTGATCGGAAGCAGGCTGCGATCGAA
GTCAGCTTCACCCATCAAGCGCATACATTCTCACTGCTATTGAGCGACCAGCTTGAAGTAGTACGTGATGCCGTGGATGA
GCAAAAGGGACTGAAGGACATACGAGATATCGACGAGCTAGCAAGCCTCCGCCATGGTCAGCGCCCAGAGCGAGGTGATC
CCAGGTTGGAGGGAACGCTACGGGGCCAAACGAGCGAACGCCCCCGAGCATCTGGCCAACTCAGCCCAACACCTGACAGG
GCGCTTAAGAAATCGAAGCCTCAACCAATCGTGCTGTACTTTTCCGTGCGGCGCGCTGTTCCTAGTCCTGGTACTCCAAA
GACAAAGGCCGGGACACCCTACCAAGGCATATTTGAGATCGAACGTGGCCTTGAACTGGGGAAAATCATCGAGTGGTGGA
ATAGCAAGGCAACGGTGGCTCGCGAAGCGCCTGACTCCCGCTCAGCCAAGCAATTAACGACGACATGCAACGCTCTGGAG
CGGCTGCTCCCGCATTTGAGCGATTGGAAAGTCGAAGATGGGAATTTCACGGTTTGTAAAGTGGCAGACGTAGGAGTGTT
GAACGACGAAAGCGGAGAGTTTGAAGTCAAACAGGAGACCCGACGCTTACCCGTTCAGTTCTTGTCTGATGGCGAACGTA
GCCTAATCGCTATCGGAATTGACATCGCCTACCGGCTTGCATCATTGAATGAAGATTCAGAGACCCCTCTGGACGATGGT
GAAGGCATAGTGTTGATTGATGAACTCGACCTGCATTTACATCCGCAATGGCAAAGAACGGTTGTCGAGTTACTACGCAC
CGCATTTCCCAAGCTTCAATTTATCTGCACCACTCATTCGTTATTCCTGATCCAATCTCAGCGCATGGGCAATTTGATTC
AGCTGGATCGCATCGGAGACGAAGAAGAATCCGCCGAGCAATACCACAATCAAAGTATCGAAGACATCGCGGAAGAAGTT
CAAGGAATAGATTTGCCACAACGAAGCAAACGACACGTTGAGTTGATGCTTGCGGCATCTGAATACTACAGAGCTTTGAA
AAAAGCTGAAGACGACCCGAACATTCCTATTGAGGAGCTAAAGGAAAAGTATGAAGCTTTAAGTCTTCGATATTCCGCCG
ATCCGTTGGTCGCTGCAGCATTGGATTTTCGATGGGAAACCTTCGTGTTTAAAAGAAACCATGCGACCCGTCGATAA

Upstream 100 bases:

>100_bases
CTTGCGGAAGCCACCGAACGAACGGTTACCGTGCTCCAAGAACGACGTTCGGCATTGATCTCGGCCGCAGTGACCGGGCA
ACTTGATCTAGGGGACGCCC

Downstream 100 bases:

>100_bases
GGGTAAGGATCTGGGGAGTTTCAAGCCTTACAACAAGGCCTGCGCTCCTTTGCAGGACAGGTTAGGAGAGTATTGTTCAT
ATTGTGAGCGCTGGATTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: SMC Domain-Containing Protein; SMC Domain Protein; AAA ATPase; RecF/RecN/SMC N Terminal Domain; RecF/RecN/SMC Family Protein; Antigen PgaA

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MQINRLTLTNFRGLTNSVLDFAPGFNLVVGVNGVGKTAVLEALRILLAKALPSFAEVRGFPGIGLTKDDITIDRKQAAIE
VSFTHQAHTFSLLLSDQLEVVRDAVDEQKGLKDIRDIDELASLRHGQRPERGDPRLEGTLRGQTSERPRASGQLSPTPDR
ALKKSKPQPIVLYFSVRRAVPSPGTPKTKAGTPYQGIFEIERGLELGKIIEWWNSKATVAREAPDSRSAKQLTTTCNALE
RLLPHLSDWKVEDGNFTVCKVADVGVLNDESGEFEVKQETRRLPVQFLSDGERSLIAIGIDIAYRLASLNEDSETPLDDG
EGIVLIDELDLHLHPQWQRTVVELLRTAFPKLQFICTTHSLFLIQSQRMGNLIQLDRIGDEEESAEQYHNQSIEDIAEEV
QGIDLPQRSKRHVELMLAASEYYRALKKAEDDPNIPIEELKEKYEALSLRYSADPLVAAALDFRWETFVFKRNHATRR

Sequences:

>Translated_478_residues
MQINRLTLTNFRGLTNSVLDFAPGFNLVVGVNGVGKTAVLEALRILLAKALPSFAEVRGFPGIGLTKDDITIDRKQAAIE
VSFTHQAHTFSLLLSDQLEVVRDAVDEQKGLKDIRDIDELASLRHGQRPERGDPRLEGTLRGQTSERPRASGQLSPTPDR
ALKKSKPQPIVLYFSVRRAVPSPGTPKTKAGTPYQGIFEIERGLELGKIIEWWNSKATVAREAPDSRSAKQLTTTCNALE
RLLPHLSDWKVEDGNFTVCKVADVGVLNDESGEFEVKQETRRLPVQFLSDGERSLIAIGIDIAYRLASLNEDSETPLDDG
EGIVLIDELDLHLHPQWQRTVVELLRTAFPKLQFICTTHSLFLIQSQRMGNLIQLDRIGDEEESAEQYHNQSIEDIAEEV
QGIDLPQRSKRHVELMLAASEYYRALKKAEDDPNIPIEELKEKYEALSLRYSADPLVAAALDFRWETFVFKRNHATRR
>Mature_478_residues
MQINRLTLTNFRGLTNSVLDFAPGFNLVVGVNGVGKTAVLEALRILLAKALPSFAEVRGFPGIGLTKDDITIDRKQAAIE
VSFTHQAHTFSLLLSDQLEVVRDAVDEQKGLKDIRDIDELASLRHGQRPERGDPRLEGTLRGQTSERPRASGQLSPTPDR
ALKKSKPQPIVLYFSVRRAVPSPGTPKTKAGTPYQGIFEIERGLELGKIIEWWNSKATVAREAPDSRSAKQLTTTCNALE
RLLPHLSDWKVEDGNFTVCKVADVGVLNDESGEFEVKQETRRLPVQFLSDGERSLIAIGIDIAYRLASLNEDSETPLDDG
EGIVLIDELDLHLHPQWQRTVVELLRTAFPKLQFICTTHSLFLIQSQRMGNLIQLDRIGDEEESAEQYHNQSIEDIAEEV
QGIDLPQRSKRHVELMLAASEYYRALKKAEDDPNIPIEELKEKYEALSLRYSADPLVAAALDFRWETFVFKRNHATRR

Specific function: The Recf Protein Is Involved In DNA Metabolism; It Is Required For DNA Replication And Normal Sos Inducibility. Recf Binds Preferentially To Single-Stranded, Linear DNA. It Also Seems To Bind ATP. [C]

COG id: COG3950

COG function: function code R; Predicted ATP-binding protein involved in virulence

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53719; Mature: 53719

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: PS00847 MCM_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQINRLTLTNFRGLTNSVLDFAPGFNLVVGVNGVGKTAVLEALRILLAKALPSFAEVRGF
CCCCEEEEHHHCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCC
PGIGLTKDDITIDRKQAAIEVSFTHQAHTFSLLLSDQLEVVRDAVDEQKGLKDIRDIDEL
CCCCCCCCCCEEECCCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLRHGQRPERGDPRLEGTLRGQTSERPRASGQLSPTPDRALKKSKPQPIVLYFSVRRAV
HHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCC
PSPGTPKTKAGTPYQGIFEIERGLELGKIIEWWNSKATVAREAPDSRSAKQLTTTCNALE
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
RLLPHLSDWKVEDGNFTVCKVADVGVLNDESGEFEVKQETRRLPVQFLSDGERSLIAIGI
HHHCCCCCCEECCCCEEEEEEECCCEECCCCCCEEEHHHHHCCCHHHHCCCCCEEEEEEH
DIAYRLASLNEDSETPLDDGEGIVLIDELDLHLHPQWQRTVVELLRTAFPKLQFICTTHS
HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEECCHHHHHHHHHHHHHCCCEEEEEECCE
LFLIQSQRMGNLIQLDRIGDEEESAEQYHNQSIEDIAEEVQGIDLPQRSKRHVELMLAAS
EEEEECCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEHH
EYYRALKKAEDDPNIPIEELKEKYEALSLRYSADPLVAAALDFRWETFVFKRNHATRR
HHHHHHHHCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHCCEEEEEEECCCCCCC
>Mature Secondary Structure
MQINRLTLTNFRGLTNSVLDFAPGFNLVVGVNGVGKTAVLEALRILLAKALPSFAEVRGF
CCCCEEEEHHHCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCC
PGIGLTKDDITIDRKQAAIEVSFTHQAHTFSLLLSDQLEVVRDAVDEQKGLKDIRDIDEL
CCCCCCCCCCEEECCCEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLRHGQRPERGDPRLEGTLRGQTSERPRASGQLSPTPDRALKKSKPQPIVLYFSVRRAV
HHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCC
PSPGTPKTKAGTPYQGIFEIERGLELGKIIEWWNSKATVAREAPDSRSAKQLTTTCNALE
CCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
RLLPHLSDWKVEDGNFTVCKVADVGVLNDESGEFEVKQETRRLPVQFLSDGERSLIAIGI
HHHCCCCCCEECCCCEEEEEEECCCEECCCCCCEEEHHHHHCCCHHHHCCCCCEEEEEEH
DIAYRLASLNEDSETPLDDGEGIVLIDELDLHLHPQWQRTVVELLRTAFPKLQFICTTHS
HHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEECCHHHHHHHHHHHHHCCCEEEEEECCE
LFLIQSQRMGNLIQLDRIGDEEESAEQYHNQSIEDIAEEVQGIDLPQRSKRHVELMLAAS
EEEEECCCCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCEEEEEEHH
EYYRALKKAEDDPNIPIEELKEKYEALSLRYSADPLVAAALDFRWETFVFKRNHATRR
HHHHHHHHCCCCCCCCHHHHHHHHHHHEEEECCCCHHHHHHHCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA