| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318694
Identifier: 74318694
GI number: 74318694
Start: 2751516
End: 2752400
Strand: Direct
Name: 74318694
Synonym: Tbd_2676
Alternate gene names: NA
Gene position: 2751516-2752400 (Clockwise)
Preceding gene: 74318693
Following gene: 74318695
Centisome position: 94.56
GC content: 52.99
Gene sequence:
>885_bases ATGTTTTTTTTAGATCAATTCGAGACGTTCGATCCGGTGTCGGGCGAGGTGCCATCCCACCCCTTTACGTATATGCCCGC TATCGCTTCGCGTGCGCGGGCAATCCTAAGATGCGGGGCAGATGAATGGTGCAGGGCAAAGCTCGCCTCGATTGCCAAAC GAATTAATCGGGAACTTGACCGGTATTTCAGCGACATCAAGATCTATGAAATTGAGCGCCTTCGCGAGCAGGCGGGGCTG TTGGAATCTATCGGGGGCGACCCCGACTGGCCACCGAACGAAGAATATCTAGACATTCAGACCTGGGAAAACACAAGCGA GGTTGACGCGCTCAAATCCGTCGTTGAGAACCGCGATTCGCACCTCTTCTTCTCCAAAGACCCACTACCAAAGTCAGAAG AGTACCCGGAGGGTAAAGACTATGAGCTGTTCGCGGTCCTTGCGCTGTGGATGCTGGCCGATGGCCTACGTTTCCTAAAC ACAACGGCCGTAGGCTTAGCAATTGCAGGTGAATTCGCTCTAAAAGCGATGGACGCGGTTTGTTATGCCGAACACTTGCG TGAAGCTGAGTGGCTCGCTTCCTATGTTGAGAAACAGGGCAACATCAAACTGACTGAAGCGCTGATAGAGCAGAAGAACG ACGCGCAAAAACAAAAATCCGCCCTCGCTAAACGGCTAAACGTTGCACGTCATCAAAAGACAACCGAAGCAAAGGCAATG GCAATCGAAGAGTTCATGAAGGATCGCGACAGATTCCCCAGTGCCGAGAAAGCCGGTATTTATCTGGCCGACTGGCTTAG AGACCAGGGCCGCCCGTTCGAGCCAAGAACGGTTACCAGTTGGATTCGCGCTCACGCGACAGCAACGGGTTTCCGGTTTC GATAG
Upstream 100 bases:
>100_bases AGCATGATCGTTTTCGCCGCGCCTAGCCCGACAGGGCGAATACTGGGAACCCTTGCCCGACTGGCGCGGCAACCAACTCA AGGGGCGTGTAAGGGACGCC
Downstream 100 bases:
>100_bases CGGCCTCCGACGGAGACCGTACGGCCTCTACCGCGCAGTGTTCGGCATCCACCGGATAGGCCTTATTCAGCAAGCGCCAT TCCATTTCAATGCGACCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MFFLDQFETFDPVSGEVPSHPFTYMPAIASRARAILRCGADEWCRAKLASIAKRINRELDRYFSDIKIYEIERLREQAGL LESIGGDPDWPPNEEYLDIQTWENTSEVDALKSVVENRDSHLFFSKDPLPKSEEYPEGKDYELFAVLALWMLADGLRFLN TTAVGLAIAGEFALKAMDAVCYAEHLREAEWLASYVEKQGNIKLTEALIEQKNDAQKQKSALAKRLNVARHQKTTEAKAM AIEEFMKDRDRFPSAEKAGIYLADWLRDQGRPFEPRTVTSWIRAHATATGFRFR
Sequences:
>Translated_294_residues MFFLDQFETFDPVSGEVPSHPFTYMPAIASRARAILRCGADEWCRAKLASIAKRINRELDRYFSDIKIYEIERLREQAGL LESIGGDPDWPPNEEYLDIQTWENTSEVDALKSVVENRDSHLFFSKDPLPKSEEYPEGKDYELFAVLALWMLADGLRFLN TTAVGLAIAGEFALKAMDAVCYAEHLREAEWLASYVEKQGNIKLTEALIEQKNDAQKQKSALAKRLNVARHQKTTEAKAM AIEEFMKDRDRFPSAEKAGIYLADWLRDQGRPFEPRTVTSWIRAHATATGFRFR >Mature_294_residues MFFLDQFETFDPVSGEVPSHPFTYMPAIASRARAILRCGADEWCRAKLASIAKRINRELDRYFSDIKIYEIERLREQAGL LESIGGDPDWPPNEEYLDIQTWENTSEVDALKSVVENRDSHLFFSKDPLPKSEEYPEGKDYELFAVLALWMLADGLRFLN TTAVGLAIAGEFALKAMDAVCYAEHLREAEWLASYVEKQGNIKLTEALIEQKNDAQKQKSALAKRLNVARHQKTTEAKAM AIEEFMKDRDRFPSAEKAGIYLADWLRDQGRPFEPRTVTSWIRAHATATGFRFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33694; Mature: 33694
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFLDQFETFDPVSGEVPSHPFTYMPAIASRARAILRCGADEWCRAKLASIAKRINRELD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RYFSDIKIYEIERLREQAGLLESIGGDPDWPPNEEYLDIQTWENTSEVDALKSVVENRDS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCC HLFFSKDPLPKSEEYPEGKDYELFAVLALWMLADGLRFLNTTAVGLAIAGEFALKAMDAV EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CYAEHLREAEWLASYVEKQGNIKLTEALIEQKNDAQKQKSALAKRLNVARHQKTTEAKAM HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIEEFMKDRDRFPSAEKAGIYLADWLRDQGRPFEPRTVTSWIRAHATATGFRFR HHHHHHHHHHCCCCCHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFFLDQFETFDPVSGEVPSHPFTYMPAIASRARAILRCGADEWCRAKLASIAKRINRELD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RYFSDIKIYEIERLREQAGLLESIGGDPDWPPNEEYLDIQTWENTSEVDALKSVVENRDS HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCC HLFFSKDPLPKSEEYPEGKDYELFAVLALWMLADGLRFLNTTAVGLAIAGEFALKAMDAV EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CYAEHLREAEWLASYVEKQGNIKLTEALIEQKNDAQKQKSALAKRLNVARHQKTTEAKAM HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIEEFMKDRDRFPSAEKAGIYLADWLRDQGRPFEPRTVTSWIRAHATATGFRFR HHHHHHHHHHCCCCCHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA