| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318653
Identifier: 74318653
GI number: 74318653
Start: 2708475
End: 2709416
Strand: Direct
Name: 74318653
Synonym: Tbd_2635
Alternate gene names: NA
Gene position: 2708475-2709416 (Clockwise)
Preceding gene: 74318648
Following gene: 74318657
Centisome position: 93.08
GC content: 67.94
Gene sequence:
>942_bases GTGCTTGCCGGCTTTTTCCGATTTCTCGGTCAAGGCCTTCTGCACCAATGCCGCAAAGGCGACGAGGTCTTGCCGGGGGT ACGCGTCCTGCACGCCGGCGTCCTGAAAGAACTCGGCGACCCAGCGGGCGTCGAGCTGGTCGCTCGCCGTCTCCTGCAGG TATTCTCGCGCGGCGGTTTCGACGTACTCGCTCAGTTTCATCGCGGCTTCCTTTTCTCGACGAAGCGGCCGGCCCCCTTG GGGAGGGTCCGTCCCCACCCTGATAGTGACCCGCCGGCCGGCTTGCCGTTCCACCCTTCGAACAGCGTATCCGGCCTGCG AGCTGGCGGCAGACGCATCGCGCGCTGTCTTATCATTCCGTCAGGGCCGCTCCAGCTGTCGGGCCAGCGTGGCCGGTGCG CGAGACGCACGTCGCGGCACGGTGCCGGTCGTTCCCGGCCGGTTTTTCAGTCCGATCAATTCCGGAGTTCAAAAATCAGC GACACGAACCCGCCTCTGCCCGCCGCGCCAAAGCCGCGGACGCTTTCGGCCGGTGTCGTCGCCGTGCGCCGCGAGGCCGG CGGCTGGCGTCTGCTCGTGCTGCGTGCCTACCGCAACTGGGACTTCCCGAAGGGTGTCGTCGAAGCGGGCGAGCCGCCGC ACGACGCGGCGATACGGGAGACCGCCGAGGAAACGGGGATCGACGATCTCGTCTTCGCCTGGGGCGACGACTTTCGCGAG ACCGCACCGTACGGCCAGGGCAAGATCGCCCGCTACTACCTCGCCGAAACGCAGCAGACGCAGATCACGCTTCCGGTTTC CCCCGAGCTCGGTCGGCCCGAGCACGACGAGTGGCGCTGGGTCGATTTCGACACGGCGCAGGATCTACTGCCGCCGCGGC TGGCGCCGATCCTGACATGGGCACGCGAGCGGCTCGCAGCCGAGGACGGCATCGCGCGCTGA
Upstream 100 bases:
>100_bases ATGCCTGCTCGCACGGCGTGAAGCGGCCTCAGGGCGATCGACCTCACGATTTGCGGGGCGACCGAGGCAAGGCCACGATG CGCGCGAGCTGGAAGCGCGT
Downstream 100 bases:
>100_bases GAGCGGACCGGCTGCTCCCGAGAGCCGGGCCTGTTTCGGTCCGGGCCCCCGGTCGACGCTGTCGATCGCTATTTGGTCAA CGCCATGAAAAGCTCGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NUDIX Family Hydrolase
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLAGFFRFLGQGLLHQCRKGDEVLPGVRVLHAGVLKELGDPAGVELVARRLLQVFSRGGFDVLAQFHRGFLFSTKRPAPL GRVRPHPDSDPPAGLPFHPSNSVSGLRAGGRRIARCLIIPSGPLQLSGQRGRCARRTSRHGAGRSRPVFQSDQFRSSKIS DTNPPLPAAPKPRTLSAGVVAVRREAGGWRLLVLRAYRNWDFPKGVVEAGEPPHDAAIRETAEETGIDDLVFAWGDDFRE TAPYGQGKIARYYLAETQQTQITLPVSPELGRPEHDEWRWVDFDTAQDLLPPRLAPILTWARERLAAEDGIAR
Sequences:
>Translated_313_residues MLAGFFRFLGQGLLHQCRKGDEVLPGVRVLHAGVLKELGDPAGVELVARRLLQVFSRGGFDVLAQFHRGFLFSTKRPAPL GRVRPHPDSDPPAGLPFHPSNSVSGLRAGGRRIARCLIIPSGPLQLSGQRGRCARRTSRHGAGRSRPVFQSDQFRSSKIS DTNPPLPAAPKPRTLSAGVVAVRREAGGWRLLVLRAYRNWDFPKGVVEAGEPPHDAAIRETAEETGIDDLVFAWGDDFRE TAPYGQGKIARYYLAETQQTQITLPVSPELGRPEHDEWRWVDFDTAQDLLPPRLAPILTWARERLAAEDGIAR >Mature_313_residues MLAGFFRFLGQGLLHQCRKGDEVLPGVRVLHAGVLKELGDPAGVELVARRLLQVFSRGGFDVLAQFHRGFLFSTKRPAPL GRVRPHPDSDPPAGLPFHPSNSVSGLRAGGRRIARCLIIPSGPLQLSGQRGRCARRTSRHGAGRSRPVFQSDQFRSSKIS DTNPPLPAAPKPRTLSAGVVAVRREAGGWRLLVLRAYRNWDFPKGVVEAGEPPHDAAIRETAEETGIDDLVFAWGDDFRE TAPYGQGKIARYYLAETQQTQITLPVSPELGRPEHDEWRWVDFDTAQDLLPPRLAPILTWARERLAAEDGIAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34559; Mature: 34559
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAGFFRFLGQGLLHQCRKGDEVLPGVRVLHAGVLKELGDPAGVELVARRLLQVFSRGGF CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH DVLAQFHRGFLFSTKRPAPLGRVRPHPDSDPPAGLPFHPSNSVSGLRAGGRRIARCLIIP HHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEC SGPLQLSGQRGRCARRTSRHGAGRSRPVFQSDQFRSSKISDTNPPLPAAPKPRTLSAGVV CCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AVRREAGGWRLLVLRAYRNWDFPKGVVEAGEPPHDAAIRETAEETGIDDLVFAWGDDFRE EEEECCCCEEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHH TAPYGQGKIARYYLAETQQTQITLPVSPELGRPEHDEWRWVDFDTAQDLLPPRLAPILTW HCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHCCHHHHHHHHH ARERLAAEDGIAR HHHHHHHHCCCCC >Mature Secondary Structure MLAGFFRFLGQGLLHQCRKGDEVLPGVRVLHAGVLKELGDPAGVELVARRLLQVFSRGGF CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCH DVLAQFHRGFLFSTKRPAPLGRVRPHPDSDPPAGLPFHPSNSVSGLRAGGRRIARCLIIP HHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEEEEEEEC SGPLQLSGQRGRCARRTSRHGAGRSRPVFQSDQFRSSKISDTNPPLPAAPKPRTLSAGVV CCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE AVRREAGGWRLLVLRAYRNWDFPKGVVEAGEPPHDAAIRETAEETGIDDLVFAWGDDFRE EEEECCCCEEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHCCCCCEEECCCCCHHH TAPYGQGKIARYYLAETQQTQITLPVSPELGRPEHDEWRWVDFDTAQDLLPPRLAPILTW HCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHCCHHHHHHHHH ARERLAAEDGIAR HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA