| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is caiE [C]
Identifier: 74318633
GI number: 74318633
Start: 2688974
End: 2689534
Strand: Direct
Name: caiE [C]
Synonym: Tbd_2615
Alternate gene names: 74318633
Gene position: 2688974-2689534 (Clockwise)
Preceding gene: 74318632
Following gene: 74318634
Centisome position: 92.41
GC content: 63.1
Gene sequence:
>561_bases ATGATCCGCAAGAATCCTTCCGGACACCTGCCGGTCGTTCACGAGACCGCCTTCGTCGACCCGACCGCGATCCTCTGCGG CAAGATCGTCGTCGAGGAAAACGTCTTCATCGGCCCTTATGCCGTCATCCGCGCCGACGAGGTCGACGCCGACGGCGACA TGGAAGCGATCGTGATTGGCGCCCACTCCAACATCCAGGACGGCGTCGTCATCCACTGCAAGGCCGGCGGCGGGGTGACA ATCGGGCGCAATTCGTCGATCGCGCATCGCTCGATCGTGCATGGCCCGTGCACCGTCGCCGACAACGTCTTCGTCGGCTT CAACTCGGTGCTGTTCAACTGCAGCGTCGGCGAGGGCTCGGTCATCCGCCACAATTCGGTCGTCGAGGGCTGCACCGTGC CGCCGGGCTTCTACATCCCGTCGACGGCGAACATCCACTCCGACAAGGACCTCGCGAGTATCGAGCGCGTGTCGCCGCAG GCCGCGGATTTTTCGGAAAGCGTCGCGCAGGCCAATCACGAGCTCGTCAAGGGCTACAAGCGCATCAGAAACGAATTCTG A
Upstream 100 bases:
>100_bases GGCCTGTCCGGTTCTCGTCGTCAAACCCTGAGTCGGATTCGCGAAAAGAAGGGCCGTGCGGGATAATCCCGGACGGCCCT TTCGCATTTCTGGAGATCCC
Downstream 100 bases:
>100_bases GGCGCTGAATGATCGCCGTACTGGAATCCTGGCGGGCCGGGCTGTTCCACCGGCGCCATTTCACCCGCAATCTCGGCGCC GGCCTCGTGGTCGGCGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MIRKNPSGHLPVVHETAFVDPTAILCGKIVVEENVFIGPYAVIRADEVDADGDMEAIVIGAHSNIQDGVVIHCKAGGGVT IGRNSSIAHRSIVHGPCTVADNVFVGFNSVLFNCSVGEGSVIRHNSVVEGCTVPPGFYIPSTANIHSDKDLASIERVSPQ AADFSESVAQANHELVKGYKRIRNEF
Sequences:
>Translated_186_residues MIRKNPSGHLPVVHETAFVDPTAILCGKIVVEENVFIGPYAVIRADEVDADGDMEAIVIGAHSNIQDGVVIHCKAGGGVT IGRNSSIAHRSIVHGPCTVADNVFVGFNSVLFNCSVGEGSVIRHNSVVEGCTVPPGFYIPSTANIHSDKDLASIERVSPQ AADFSESVAQANHELVKGYKRIRNEF >Mature_186_residues MIRKNPSGHLPVVHETAFVDPTAILCGKIVVEENVFIGPYAVIRADEVDADGDMEAIVIGAHSNIQDGVVIHCKAGGGVT IGRNSSIAHRSIVHGPCTVADNVFVGFNSVLFNCSVGEGSVIRHNSVVEGCTVPPGFYIPSTANIHSDKDLASIERVSPQ AADFSESVAQANHELVKGYKRIRNEF
Specific function: Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation [H]
COG id: COG0663
COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI87081681, Length=123, Percent_Identity=39.0243902439024, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1787667, Length=149, Percent_Identity=32.2147651006711, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI87082240, Length=134, Percent_Identity=29.1044776119403, Blast_Score=68, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 19789; Mature: 19789
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKNPSGHLPVVHETAFVDPTAILCGKIVVEENVFIGPYAVIRADEVDADGDMEAIVIG CCCCCCCCCCCEEECCCCCCHHHHHHCEEEEECCEEECCEEEEEECCCCCCCCEEEEEEE AHSNIQDGVVIHCKAGGGVTIGRNSSIAHRSIVHGPCTVADNVFVGFNSVLFNCSVGEGS CCCCCCCCEEEEEECCCCEEECCCCCCCHHEEECCCCEECCCEEEEECEEEEEEECCCCC VIRHNSVVEGCTVPPGFYIPSTANIHSDKDLASIERVSPQAADFSESVAQANHELVKGYK EEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RIRNEF HHHHCC >Mature Secondary Structure MIRKNPSGHLPVVHETAFVDPTAILCGKIVVEENVFIGPYAVIRADEVDADGDMEAIVIG CCCCCCCCCCCEEECCCCCCHHHHHHCEEEEECCEEECCEEEEEECCCCCCCCEEEEEEE AHSNIQDGVVIHCKAGGGVTIGRNSSIAHRSIVHGPCTVADNVFVGFNSVLFNCSVGEGS CCCCCCCCEEEEEECCCCEEECCCCCCCHHEEECCCCEECCCEEEEECEEEEEEECCCCC VIRHNSVVEGCTVPPGFYIPSTANIHSDKDLASIERVSPQAADFSESVAQANHELVKGYK EEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RIRNEF HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041719; 8665839; 10924115 [H]