| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is msbA
Identifier: 74318525
GI number: 74318525
Start: 2579895
End: 2581634
Strand: Direct
Name: msbA
Synonym: Tbd_2507
Alternate gene names: 74318525
Gene position: 2579895-2581634 (Clockwise)
Preceding gene: 74318524
Following gene: 74318526
Centisome position: 88.66
GC content: 66.95
Gene sequence:
>1740_bases GTGAGCGCGCCGACTAGCCGTCATCTCTACGGGCGCCTGCTCGGCTACGTGAAGCCGCACTGGCGCATGTTCGCGCTCTC GATTGTCGGCCTGATCCTCACCGCCGCGACCGAGCCGATGCTGCCGGCGCTGTTCAAACCGCTGCTGGACGAGGGCTTCG TCGCCAAGGACCAGGACTTCATCCGCTGGGTGCCGCTCTTGCTGCTGGGCCTGTTCGTCCTGAGGGGGGTCGCGAGCTTC ATCAGCACCTACAGCATGGCCTGGGTCGGCAGTCGCCTCGTGATGGACCTGCGCGCGGCGATGTTCGACAAGCTGATGGC GTTGCCGACGCGTTACTTCGACCAGAACCCCAGCGGCCAGCTGATTGCGCAGCTCGCGTTCAACGTCACCCAGGTCACGC AGTCGGCGACGAGTTCGCTGACGACGCTCGTGCGCGACACGGTCACCGTTCTGGGGCTGCTCGGCTATCTCGTGTGGCTC AACTGGCGGCTCACGCTGATCGTGTTCGCGCTCGTGCCGCTGACCTTGTGGGTCGTGCGCGTCGCGAGCAAGCGCCTGCG CGGCCTCTCGCGCAAGGCGCAGGAGAACATCGGTGACCTCACGCAGGTGGTCGACGAGGCCGTCGGCGGCCATCGCGTGG TCAAGCTCTATGGCGGCGAAACCTACGAGCAGGCGCGTTTCCATCGCGCGGCGAACCTCGCGCGCCAGTTCGAGATGAAG CGCGTCGCGGCCAACGCGGTGTACGAGCCGGTGATCCAGTTCATCGCCGCCATCGCGCTTGCGATCATCGTGTTCATCGC GGCCGGGCAGGCGAGTGCGAACACGACGACGGTCGGCGGCTTCGTCGCCTTCTTCATGGCAATGCTGCTGCTGTTCGCGC CGCTCAAGCGCCTGACCGCGGTCAACGACCAGCTGCAGCGCGGCCTCGCGGCGTCGGAGACGATCTTCGCGCTGCTCGAC CAGGACGCCGAGCGCGACACCGGCACCCGCGAACCGGCGCACATCGAAGGCCGCCTCGCGTTCCGTGACGTGGGCCTGAC CTACCCCGGCAAGCAGACGCCTGCACTCGCGCGCATTTCACTCGACATCGCGCCGGGCGAAACGGTCGCACTCGTCGGTG CGTCGGGTTCGGGCAAGACGACGTTGGCGAACCTCGTGCCGCGTTTCTACGACCCGGATGCTGGGAGGATCGAGCTCGAC GGCGTCGACATCCGCGACGTCAAGCTGCAAAGCCTGCGCGGCCACATCGCGCTGGTGTCGCAGGACGTCGTGCTGTTCAA CGACACGCTCGCGCACAACATCGCCTACGGCAGCAAGCGCGAGGCGAGCCCCGACGAGATCCGCGCGGCCTGCGTCGCGG CGCATGCCTGGGATTTCATCCAGGCGATGCCCGACGGCCTCGACACGTTGATCGGTGAGAACGGCATGCGCCTGTCGGGT GGCCAGCGCCAACGAATCGCCATCGCGCGCGCGATCCTCAAGAACGCGCCGATCCTGATTCTCGACGAAGCGACCTCGGC GCTCGACAGCGAGTCCGAACGCCACGTCCAAGCAGCACTCGAGACGCTCATGCAAAACCGCACGACGCTCGTCATCGCGC ACCGGCTGTCGACCATCGAGCGCGCGAACCGCATCGTCGTACTCGAAGGCGGACGCATCGTGGAAACCGGCGCCCACGCC GACCTGCTCGCGAAGCAGGGCCGCTACGCGCAACTCCACGCGCTGCAGTTTTCGCAATGA
Upstream 100 bases:
>100_bases TCAAGCGCGACCCGGCGATCGGCTCGTCGGTGCTGCTGACCTTCGTCACCGACAGCATGGGCTTCTTCATCTTCCTCGGG CTCGCGACCCTGCTGCTGCT
Downstream 100 bases:
>100_bases ACGACGCGCCGCAAACCGCCTGGATCAAGCCTTCGCGCTCGCTCGTCACCGCGGCTGGCCGCGCGATCGGCGACTACCGC ATGATCCGCGATGGCGACCG
Product: lipid A export ATP-binding/permease MsbA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MSAPTSRHLYGRLLGYVKPHWRMFALSIVGLILTAATEPMLPALFKPLLDEGFVAKDQDFIRWVPLLLLGLFVLRGVASF ISTYSMAWVGSRLVMDLRAAMFDKLMALPTRYFDQNPSGQLIAQLAFNVTQVTQSATSSLTTLVRDTVTVLGLLGYLVWL NWRLTLIVFALVPLTLWVVRVASKRLRGLSRKAQENIGDLTQVVDEAVGGHRVVKLYGGETYEQARFHRAANLARQFEMK RVAANAVYEPVIQFIAAIALAIIVFIAAGQASANTTTVGGFVAFFMAMLLLFAPLKRLTAVNDQLQRGLAASETIFALLD QDAERDTGTREPAHIEGRLAFRDVGLTYPGKQTPALARISLDIAPGETVALVGASGSGKTTLANLVPRFYDPDAGRIELD GVDIRDVKLQSLRGHIALVSQDVVLFNDTLAHNIAYGSKREASPDEIRAACVAAHAWDFIQAMPDGLDTLIGENGMRLSG GQRQRIAIARAILKNAPILILDEATSALDSESERHVQAALETLMQNRTTLVIAHRLSTIERANRIVVLEGGRIVETGAHA DLLAKQGRYAQLHALQFSQ
Sequences:
>Translated_579_residues MSAPTSRHLYGRLLGYVKPHWRMFALSIVGLILTAATEPMLPALFKPLLDEGFVAKDQDFIRWVPLLLLGLFVLRGVASF ISTYSMAWVGSRLVMDLRAAMFDKLMALPTRYFDQNPSGQLIAQLAFNVTQVTQSATSSLTTLVRDTVTVLGLLGYLVWL NWRLTLIVFALVPLTLWVVRVASKRLRGLSRKAQENIGDLTQVVDEAVGGHRVVKLYGGETYEQARFHRAANLARQFEMK RVAANAVYEPVIQFIAAIALAIIVFIAAGQASANTTTVGGFVAFFMAMLLLFAPLKRLTAVNDQLQRGLAASETIFALLD QDAERDTGTREPAHIEGRLAFRDVGLTYPGKQTPALARISLDIAPGETVALVGASGSGKTTLANLVPRFYDPDAGRIELD GVDIRDVKLQSLRGHIALVSQDVVLFNDTLAHNIAYGSKREASPDEIRAACVAAHAWDFIQAMPDGLDTLIGENGMRLSG GQRQRIAIARAILKNAPILILDEATSALDSESERHVQAALETLMQNRTTLVIAHRLSTIERANRIVVLEGGRIVETGAHA DLLAKQGRYAQLHALQFSQ >Mature_578_residues SAPTSRHLYGRLLGYVKPHWRMFALSIVGLILTAATEPMLPALFKPLLDEGFVAKDQDFIRWVPLLLLGLFVLRGVASFI STYSMAWVGSRLVMDLRAAMFDKLMALPTRYFDQNPSGQLIAQLAFNVTQVTQSATSSLTTLVRDTVTVLGLLGYLVWLN WRLTLIVFALVPLTLWVVRVASKRLRGLSRKAQENIGDLTQVVDEAVGGHRVVKLYGGETYEQARFHRAANLARQFEMKR VAANAVYEPVIQFIAAIALAIIVFIAAGQASANTTTVGGFVAFFMAMLLLFAPLKRLTAVNDQLQRGLAASETIFALLDQ DAERDTGTREPAHIEGRLAFRDVGLTYPGKQTPALARISLDIAPGETVALVGASGSGKTTLANLVPRFYDPDAGRIELDG VDIRDVKLQSLRGHIALVSQDVVLFNDTLAHNIAYGSKREASPDEIRAACVAAHAWDFIQAMPDGLDTLIGENGMRLSGG QRQRIAIARAILKNAPILILDEATSALDSESERHVQAALETLMQNRTTLVIAHRLSTIERANRIVVLEGGRIVETGAHAD LLAKQGRYAQLHALQFSQ
Specific function: Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation
COG id: COG1132
COG function: function code V; ABC-type multidrug transport system, ATPase and permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain
Homologues:
Organism=Homo sapiens, GI156105685, Length=516, Percent_Identity=38.3720930232558, Blast_Score=309, Evalue=6e-84, Organism=Homo sapiens, GI9955966, Length=564, Percent_Identity=33.3333333333333, Blast_Score=306, Evalue=3e-83, Organism=Homo sapiens, GI45243524, Length=564, Percent_Identity=33.3333333333333, Blast_Score=306, Evalue=3e-83, Organism=Homo sapiens, GI9961252, Length=508, Percent_Identity=34.251968503937, Blast_Score=296, Evalue=3e-80, Organism=Homo sapiens, GI9961250, Length=508, Percent_Identity=34.251968503937, Blast_Score=296, Evalue=4e-80, Organism=Homo sapiens, GI4505771, Length=508, Percent_Identity=34.251968503937, Blast_Score=296, Evalue=4e-80, Organism=Homo sapiens, GI171184400, Length=575, Percent_Identity=33.3913043478261, Blast_Score=296, Evalue=4e-80, Organism=Homo sapiens, GI9955968, Length=564, Percent_Identity=32.6241134751773, Blast_Score=287, Evalue=2e-77, Organism=Homo sapiens, GI42741659, Length=540, Percent_Identity=33.7037037037037, Blast_Score=277, Evalue=2e-74, Organism=Homo sapiens, GI148612844, Length=582, Percent_Identity=32.4742268041237, Blast_Score=273, Evalue=4e-73, Organism=Homo sapiens, GI255708477, Length=582, Percent_Identity=32.4742268041237, Blast_Score=273, Evalue=4e-73, Organism=Homo sapiens, GI21536378, Length=582, Percent_Identity=31.9587628865979, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI9955963, Length=457, Percent_Identity=37.855579868709, Blast_Score=265, Evalue=1e-70, Organism=Homo sapiens, GI73747915, Length=576, Percent_Identity=30.7291666666667, Blast_Score=244, Evalue=1e-64, Organism=Homo sapiens, GI9665248, Length=501, Percent_Identity=30.7385229540918, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI42490749, Length=521, Percent_Identity=33.3973128598848, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI73747917, Length=518, Percent_Identity=30.1158301158301, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI110832837, Length=513, Percent_Identity=26.1208576998051, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI110832839, Length=519, Percent_Identity=26.3969171483622, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI110832835, Length=519, Percent_Identity=26.3969171483622, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI134142340, Length=511, Percent_Identity=28.1800391389432, Blast_Score=173, Evalue=5e-43, Organism=Homo sapiens, GI9955970, Length=494, Percent_Identity=27.9352226720648, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI134142337, Length=511, Percent_Identity=28.1800391389432, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI134142342, Length=511, Percent_Identity=28.1800391389432, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI134142345, Length=514, Percent_Identity=28.2101167315175, Blast_Score=172, Evalue=7e-43, Organism=Homo sapiens, GI118582255, Length=508, Percent_Identity=27.3622047244095, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI4557481, Length=507, Percent_Identity=26.4299802761341, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI21729873, Length=477, Percent_Identity=25.9958071278826, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI15149474, Length=477, Percent_Identity=25.9958071278826, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI89111135, Length=220, Percent_Identity=35, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI66529005, Length=486, Percent_Identity=24.8971193415638, Blast_Score=144, Evalue=3e-34, Organism=Homo sapiens, GI157502201, Length=472, Percent_Identity=24.364406779661, Blast_Score=137, Evalue=4e-32, Organism=Homo sapiens, GI190343023, Length=236, Percent_Identity=36.864406779661, Blast_Score=136, Evalue=5e-32, Organism=Homo sapiens, GI134142335, Length=421, Percent_Identity=26.603325415677, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI157502203, Length=505, Percent_Identity=24.7524752475248, Blast_Score=134, Evalue=3e-31, Organism=Homo sapiens, GI255708371, Length=123, Percent_Identity=52.8455284552846, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI25914749, Length=228, Percent_Identity=37.280701754386, Blast_Score=128, Evalue=1e-29, Organism=Homo sapiens, GI255708373, Length=123, Percent_Identity=52.8455284552846, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI21729876, Length=555, Percent_Identity=23.6036036036036, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI90421313, Length=413, Percent_Identity=23.0024213075061, Blast_Score=112, Evalue=9e-25, Organism=Homo sapiens, GI150417984, Length=231, Percent_Identity=29.004329004329, Blast_Score=89, Evalue=2e-17, Organism=Homo sapiens, GI116734710, Length=225, Percent_Identity=25.7777777777778, Blast_Score=83, Evalue=8e-16, Organism=Homo sapiens, GI27262624, Length=251, Percent_Identity=28.2868525896414, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI27262626, Length=251, Percent_Identity=28.2868525896414, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI105990541, Length=210, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI45446740, Length=234, Percent_Identity=23.0769230769231, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI47078218, Length=234, Percent_Identity=23.0769230769231, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI46592898, Length=240, Percent_Identity=29.5833333333333, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI46592915, Length=239, Percent_Identity=29.7071129707113, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI46592964, Length=239, Percent_Identity=29.7071129707113, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI46592971, Length=239, Percent_Identity=29.7071129707113, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI46592978, Length=239, Percent_Identity=29.7071129707113, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI46592956, Length=239, Percent_Identity=29.7071129707113, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI1787143, Length=570, Percent_Identity=46.6666666666667, Blast_Score=553, Evalue=1e-158, Organism=Escherichia coli, GI1786653, Length=582, Percent_Identity=29.8969072164948, Blast_Score=234, Evalue=2e-62, Organism=Escherichia coli, GI1786654, Length=583, Percent_Identity=30.0171526586621, Blast_Score=226, Evalue=4e-60, Organism=Escherichia coli, GI1787112, Length=492, Percent_Identity=29.2682926829268, Blast_Score=191, Evalue=8e-50, Organism=Escherichia coli, GI1787113, Length=518, Percent_Identity=24.7104247104247, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI1786253, Length=219, Percent_Identity=34.2465753424658, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1788225, Length=218, Percent_Identity=35.7798165137615, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=33.0472103004292, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789032, Length=221, Percent_Identity=33.9366515837104, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1787370, Length=234, Percent_Identity=30.3418803418803, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1787029, Length=210, Percent_Identity=32.8571428571429, Blast_Score=96, Evalue=6e-21, Organism=Escherichia coli, GI1790162, Length=230, Percent_Identity=30.4347826086957, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1787105, Length=224, Percent_Identity=31.6964285714286, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1786698, Length=216, Percent_Identity=29.1666666666667, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1788761, Length=211, Percent_Identity=33.175355450237, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI87081709, Length=212, Percent_Identity=31.1320754716981, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI1789672, Length=233, Percent_Identity=31.7596566523605, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI145693107, Length=240, Percent_Identity=31.25, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1786398, Length=211, Percent_Identity=30.8056872037915, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1788540, Length=495, Percent_Identity=24.8484848484848, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1789891, Length=224, Percent_Identity=32.5892857142857, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1787089, Length=212, Percent_Identity=29.7169811320755, Blast_Score=83, Evalue=5e-17, Organism=Escherichia coli, GI87082267, Length=231, Percent_Identity=29.004329004329, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1787758, Length=231, Percent_Identity=33.7662337662338, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87081834, Length=216, Percent_Identity=30.5555555555556, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1786872, Length=199, Percent_Identity=31.6582914572864, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787759, Length=252, Percent_Identity=30.1587301587302, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1787712, Length=215, Percent_Identity=30.6976744186047, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788210, Length=225, Percent_Identity=29.7777777777778, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788506, Length=249, Percent_Identity=30.5220883534137, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786563, Length=213, Percent_Identity=32.3943661971831, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1788450, Length=224, Percent_Identity=27.6785714285714, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1789873, Length=222, Percent_Identity=32.4324324324324, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1787792, Length=231, Percent_Identity=29.004329004329, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790467, Length=208, Percent_Identity=29.8076923076923, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790544, Length=227, Percent_Identity=31.2775330396476, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI87082268, Length=235, Percent_Identity=29.7872340425532, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787164, Length=202, Percent_Identity=31.1881188118812, Blast_Score=70, Evalue=5e-13, Organism=Escherichia coli, GI1789890, Length=219, Percent_Identity=29.6803652968037, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI48994943, Length=242, Percent_Identity=25.2066115702479, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786803, Length=239, Percent_Identity=26.7782426778243, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790190, Length=226, Percent_Identity=27.4336283185841, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790739, Length=236, Percent_Identity=24.5762711864407, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI87081782, Length=234, Percent_Identity=24.3589743589744, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI1787500, Length=223, Percent_Identity=28.2511210762332, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115533592, Length=572, Percent_Identity=34.0909090909091, Blast_Score=305, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17533971, Length=573, Percent_Identity=31.239092495637, Blast_Score=302, Evalue=3e-82, Organism=Caenorhabditis elegans, GI17543740, Length=581, Percent_Identity=31.3253012048193, Blast_Score=297, Evalue=1e-80, Organism=Caenorhabditis elegans, GI193202349, Length=520, Percent_Identity=34.2307692307692, Blast_Score=286, Evalue=2e-77, Organism=Caenorhabditis elegans, GI17558664, Length=533, Percent_Identity=33.9587242026266, Blast_Score=281, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17565938, Length=578, Percent_Identity=29.5847750865052, Blast_Score=280, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17511077, Length=569, Percent_Identity=29.3497363796134, Blast_Score=278, Evalue=6e-75, Organism=Caenorhabditis elegans, GI71992290, Length=572, Percent_Identity=30.7692307692308, Blast_Score=273, Evalue=2e-73, Organism=Caenorhabditis elegans, GI115535101, Length=525, Percent_Identity=31.4285714285714, Blast_Score=271, Evalue=6e-73, Organism=Caenorhabditis elegans, GI71992285, Length=570, Percent_Identity=32.6315789473684, Blast_Score=270, Evalue=2e-72, Organism=Caenorhabditis elegans, GI17569145, Length=510, Percent_Identity=32.5490196078431, Blast_Score=268, Evalue=4e-72, Organism=Caenorhabditis elegans, GI193208177, Length=572, Percent_Identity=32.5174825174825, Blast_Score=267, Evalue=9e-72, Organism=Caenorhabditis elegans, GI193211015, Length=577, Percent_Identity=30.5025996533795, Blast_Score=264, Evalue=8e-71, Organism=Caenorhabditis elegans, GI193211017, Length=513, Percent_Identity=32.5536062378168, Blast_Score=264, Evalue=1e-70, Organism=Caenorhabditis elegans, GI17541710, Length=502, Percent_Identity=33.2669322709163, Blast_Score=263, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17567265, Length=509, Percent_Identity=31.041257367387, Blast_Score=262, Evalue=4e-70, Organism=Caenorhabditis elegans, GI17569143, Length=566, Percent_Identity=31.9787985865724, Blast_Score=261, Evalue=1e-69, Organism=Caenorhabditis elegans, GI71996809, Length=516, Percent_Identity=33.1395348837209, Blast_Score=260, Evalue=1e-69, Organism=Caenorhabditis elegans, GI115534520, Length=575, Percent_Identity=28.3478260869565, Blast_Score=258, Evalue=7e-69, Organism=Caenorhabditis elegans, GI212646699, Length=522, Percent_Identity=33.7164750957854, Blast_Score=253, Evalue=2e-67, Organism=Caenorhabditis elegans, GI17567269, Length=584, Percent_Identity=28.7671232876712, Blast_Score=252, Evalue=5e-67, Organism=Caenorhabditis elegans, GI25146777, Length=600, Percent_Identity=29.3333333333333, Blast_Score=241, Evalue=6e-64, Organism=Caenorhabditis elegans, GI193209708, Length=521, Percent_Identity=30.7101727447217, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI71996550, Length=393, Percent_Identity=36.8956743002545, Blast_Score=236, Evalue=2e-62, Organism=Caenorhabditis elegans, GI71984940, Length=522, Percent_Identity=32.3754789272031, Blast_Score=228, Evalue=7e-60, Organism=Caenorhabditis elegans, GI32563727, Length=477, Percent_Identity=25.1572327044025, Blast_Score=179, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17569081, Length=488, Percent_Identity=27.4590163934426, Blast_Score=162, Evalue=7e-40, Organism=Caenorhabditis elegans, GI71992066, Length=514, Percent_Identity=26.6536964980545, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI25146765, Length=516, Percent_Identity=26.3565891472868, Blast_Score=154, Evalue=1e-37, Organism=Caenorhabditis elegans, GI17551700, Length=470, Percent_Identity=26.3829787234043, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17551702, Length=474, Percent_Identity=26.3713080168776, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI71992070, Length=518, Percent_Identity=26.0617760617761, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI86564969, Length=517, Percent_Identity=25.7253384912959, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17567243, Length=513, Percent_Identity=25.1461988304094, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI71988343, Length=487, Percent_Identity=23.4086242299795, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI32566680, Length=261, Percent_Identity=35.632183908046, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI193209740, Length=498, Percent_Identity=25.3012048192771, Blast_Score=138, Evalue=7e-33, Organism=Caenorhabditis elegans, GI71992080, Length=234, Percent_Identity=34.1880341880342, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI17556528, Length=423, Percent_Identity=27.1867612293144, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17558094, Length=331, Percent_Identity=23.8670694864048, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71983510, Length=260, Percent_Identity=25.7692307692308, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71983516, Length=260, Percent_Identity=25.7692307692308, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71983523, Length=260, Percent_Identity=25.7692307692308, Blast_Score=78, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17539902, Length=288, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115532730, Length=201, Percent_Identity=29.8507462686567, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17565586, Length=218, Percent_Identity=25.2293577981651, Blast_Score=69, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323217, Length=501, Percent_Identity=33.1337325349301, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6324985, Length=571, Percent_Identity=30.2977232924694, Blast_Score=249, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6322640, Length=593, Percent_Identity=28.6677908937605, Blast_Score=225, Evalue=1e-59, Organism=Saccharomyces cerevisiae, GI6323959, Length=584, Percent_Identity=29.9657534246575, Blast_Score=219, Evalue=7e-58, Organism=Saccharomyces cerevisiae, GI6320339, Length=487, Percent_Identity=25.6673511293634, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6323014, Length=539, Percent_Identity=25.6029684601113, Blast_Score=142, Evalue=1e-34, Organism=Saccharomyces cerevisiae, GI6321720, Length=544, Percent_Identity=26.4705882352941, Blast_Score=139, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6321752, Length=244, Percent_Identity=29.5081967213115, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6322980, Length=523, Percent_Identity=21.7973231357553, Blast_Score=124, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6322957, Length=271, Percent_Identity=28.7822878228782, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6322956, Length=435, Percent_Identity=26.6666666666667, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6319856, Length=267, Percent_Identity=25.0936329588015, Blast_Score=69, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6324398, Length=231, Percent_Identity=29.4372294372294, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI23397593, Length=582, Percent_Identity=33.6769759450172, Blast_Score=308, Evalue=8e-84, Organism=Drosophila melanogaster, GI24641565, Length=580, Percent_Identity=34.6551724137931, Blast_Score=307, Evalue=1e-83, Organism=Drosophila melanogaster, GI85726357, Length=576, Percent_Identity=31.7708333333333, Blast_Score=283, Evalue=2e-76, Organism=Drosophila melanogaster, GI24653245, Length=488, Percent_Identity=33.4016393442623, Blast_Score=267, Evalue=2e-71, Organism=Drosophila melanogaster, GI281363262, Length=434, Percent_Identity=36.6359447004608, Blast_Score=266, Evalue=4e-71, Organism=Drosophila melanogaster, GI17136662, Length=614, Percent_Identity=31.9218241042345, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24659289, Length=605, Percent_Identity=30.5785123966942, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI21357907, Length=513, Percent_Identity=34.307992202729, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI21357851, Length=400, Percent_Identity=37, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI45551502, Length=400, Percent_Identity=37, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI45551501, Length=400, Percent_Identity=37, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI28574259, Length=484, Percent_Identity=26.4462809917355, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI45552353, Length=512, Percent_Identity=26.3671875, Blast_Score=160, Evalue=3e-39, Organism=Drosophila melanogaster, GI24583969, Length=512, Percent_Identity=26.3671875, Blast_Score=160, Evalue=3e-39, Organism=Drosophila melanogaster, GI45552363, Length=501, Percent_Identity=26.1477045908184, Blast_Score=159, Evalue=6e-39, Organism=Drosophila melanogaster, GI45552343, Length=501, Percent_Identity=26.1477045908184, Blast_Score=159, Evalue=6e-39, Organism=Drosophila melanogaster, GI45552345, Length=474, Percent_Identity=26.3713080168776, Blast_Score=159, Evalue=7e-39, Organism=Drosophila melanogaster, GI45552335, Length=474, Percent_Identity=26.3713080168776, Blast_Score=159, Evalue=7e-39, Organism=Drosophila melanogaster, GI45552357, Length=503, Percent_Identity=26.6401590457256, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI45552355, Length=503, Percent_Identity=26.6401590457256, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24650986, Length=512, Percent_Identity=25.390625, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI21358185, Length=512, Percent_Identity=25.390625, Blast_Score=156, Evalue=4e-38, Organism=Drosophila melanogaster, GI24585091, Length=534, Percent_Identity=25.4681647940075, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI45552361, Length=466, Percent_Identity=26.3948497854077, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI45552349, Length=466, Percent_Identity=26.3948497854077, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI45552359, Length=465, Percent_Identity=26.6666666666667, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI45550972, Length=465, Percent_Identity=26.6666666666667, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI45552341, Length=465, Percent_Identity=26.6666666666667, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI45552337, Length=242, Percent_Identity=35.5371900826446, Blast_Score=152, Evalue=8e-37, Organism=Drosophila melanogaster, GI45552347, Length=242, Percent_Identity=35.5371900826446, Blast_Score=152, Evalue=9e-37, Organism=Drosophila melanogaster, GI45552339, Length=242, Percent_Identity=35.5371900826446, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI45552351, Length=242, Percent_Identity=35.5371900826446, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI281361582, Length=491, Percent_Identity=25.8655804480652, Blast_Score=149, Evalue=4e-36, Organism=Drosophila melanogaster, GI19920928, Length=488, Percent_Identity=27.6639344262295, Blast_Score=149, Evalue=5e-36, Organism=Drosophila melanogaster, GI24648279, Length=506, Percent_Identity=24.901185770751, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI45550390, Length=533, Percent_Identity=23.827392120075, Blast_Score=147, Evalue=2e-35, Organism=Drosophila melanogaster, GI221460257, Length=526, Percent_Identity=24.9049429657795, Blast_Score=145, Evalue=8e-35, Organism=Drosophila melanogaster, GI62484234, Length=552, Percent_Identity=25.1811594202899, Blast_Score=145, Evalue=1e-34, Organism=Drosophila melanogaster, GI221474134, Length=233, Percent_Identity=35.6223175965665, Blast_Score=140, Evalue=3e-33, Organism=Drosophila melanogaster, GI45552437, Length=505, Percent_Identity=24.7524752475248, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI161077321, Length=499, Percent_Identity=24.248496993988, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24585557, Length=505, Percent_Identity=24.7524752475248, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24649703, Length=495, Percent_Identity=24.2424242424242, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI161078426, Length=250, Percent_Identity=30, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI116007328, Length=212, Percent_Identity=29.2452830188679, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI28574150, Length=212, Percent_Identity=29.2452830188679, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24666092, Length=241, Percent_Identity=25.7261410788382, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI28574744, Length=213, Percent_Identity=29.1079812206573, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI17136592, Length=207, Percent_Identity=29.4685990338164, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MSBA_THIDA (Q3SFZ6)
Other databases:
- EMBL: CP000116 - RefSeq: YP_316265.1 - HSSP: Q7RBT4 - ProteinModelPortal: Q3SFZ6 - SMR: Q3SFZ6 - STRING: Q3SFZ6 - GeneID: 3671826 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_2507 - NMPDR: fig|292415.3.peg.2580 - eggNOG: COG1132 - HOGENOM: HBG758042 - OMA: YSANATH - PhylomeDB: Q3SFZ6 - ProtClustDB: CLSK716738 - BioCyc: TDEN292415:TBD_2507-MONOMER - HAMAP: MF_01703 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017940 - InterPro: IPR011917 - InterPro: IPR001140 - InterPro: IPR011527 - InterPro: IPR003593 - SMART: SM00382 - TIGRFAMs: TIGR02203
Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran; SSF90123 ABC_TM_1
EC number: NA
Molecular weight: Translated: 63324; Mature: 63193
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS50929 ABC_TM1F; PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2; PS51239 MSBA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1e41ab28)-; HASH(0x1de72c6c)-; HASH(0x1beb4284)-; HASH(0x1d887558)-; HASH(0x1d7d673c)-;
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTSRHLYGRLLGYVKPHWRMFALSIVGLILTAATEPMLPALFKPLLDEGFVAKDQDF CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHH IRWVPLLLLGLFVLRGVASFISTYSMAWVGSRLVMDLRAAMFDKLMALPTRYFDQNPSGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LIAQLAFNVTQVTQSATSSLTTLVRDTVTVLGLLGYLVWLNWRLTLIVFALVPLTLWVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VASKRLRGLSRKAQENIGDLTQVVDEAVGGHRVVKLYGGETYEQARFHRAANLARQFEMK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH RVAANAVYEPVIQFIAAIALAIIVFIAAGQASANTTTVGGFVAFFMAMLLLFAPLKRLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VNDQLQRGLAASETIFALLDQDAERDTGTREPAHIEGRLAFRDVGLTYPGKQTPALARIS HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE LDIAPGETVALVGASGSGKTTLANLVPRFYDPDAGRIELDGVDIRDVKLQSLRGHIALVS EEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEE QDVVLFNDTLAHNIAYGSKREASPDEIRAACVAAHAWDFIQAMPDGLDTLIGENGMRLSG CCEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC GQRQRIAIARAILKNAPILILDEATSALDSESERHVQAALETLMQNRTTLVIAHRLSTIE CCHHHHHHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH RANRIVVLEGGRIVETGAHADLLAKQGRYAQLHALQFSQ HCCEEEEEECCEEEECCCCHHHHHCCCCCEEEEEEECCH >Mature Secondary Structure SAPTSRHLYGRLLGYVKPHWRMFALSIVGLILTAATEPMLPALFKPLLDEGFVAKDQDF CCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHH IRWVPLLLLGLFVLRGVASFISTYSMAWVGSRLVMDLRAAMFDKLMALPTRYFDQNPSGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH LIAQLAFNVTQVTQSATSSLTTLVRDTVTVLGLLGYLVWLNWRLTLIVFALVPLTLWVVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VASKRLRGLSRKAQENIGDLTQVVDEAVGGHRVVKLYGGETYEQARFHRAANLARQFEMK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH RVAANAVYEPVIQFIAAIALAIIVFIAAGQASANTTTVGGFVAFFMAMLLLFAPLKRLTA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VNDQLQRGLAASETIFALLDQDAERDTGTREPAHIEGRLAFRDVGLTYPGKQTPALARIS HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEE LDIAPGETVALVGASGSGKTTLANLVPRFYDPDAGRIELDGVDIRDVKLQSLRGHIALVS EEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCEEEEE QDVVLFNDTLAHNIAYGSKREASPDEIRAACVAAHAWDFIQAMPDGLDTLIGENGMRLSG CCEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCC GQRQRIAIARAILKNAPILILDEATSALDSESERHVQAALETLMQNRTTLVIAHRLSTIE CCHHHHHHHHHHHHCCCEEEEECCHHHHCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHH RANRIVVLEGGRIVETGAHADLLAKQGRYAQLHALQFSQ HCCEEEEEECCEEEECCCCHHHHHCCCCCEEEEEEECCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA