Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318468

Identifier: 74318468

GI number: 74318468

Start: 2520410

End: 2521186

Strand: Reverse

Name: 74318468

Synonym: Tbd_2450

Alternate gene names: NA

Gene position: 2521186-2520410 (Counterclockwise)

Preceding gene: 74318469

Following gene: 74318466

Centisome position: 86.64

GC content: 68.34

Gene sequence:

>777_bases
ATGAACACGCCAAGCAGTCAGGACATTCCCCGCCGCGTCGCGGCCGCCGAGGGTTTTCGGTGGGTCGCCGCGGGCTTTCG
CCTTTATCGCAAGAATCCGCTCCTGCTCTCCGCCGCGTTCGGCGTGCTGTTCGGCGTCGTCATGGCGCTGGGCCTCATCC
CGGTGATCGGCGGCTCGCTTTCCGAACTCGCGTCGCCGCTCATGGTGGCGGGTTTCATGGCTGCGTATCGCGCGCTCGAC
GAAGGGCGCGAGCTGGAACTGCCGCAATTTCTCGCCGGCGTGCGCGGGCCCGCGATCCCGCTGGCGACGGTCGGCGCCGT
GCAACTGCTAGGCACGCTGGCGATCGGCCAGGTCATGCTCGCGATGGGATTCGATCCGCAGGCGCTGATGGCCGCCGCGC
AGTCGCAGAAGGACCCTCAGGAAATGCAGGCCGTGCTCGATCAGTCGATGCCCGCCATGCTCACGGGCCTGCTGCTGTTT
CTGCCCCTGATCATGGCGACCTGGTTCGCGCCGGCGCTGATCCTGTTCGGCGGCGCGCGGCCGTTGACGGCGCTCGGCGT
GAGCTTCAAGGCGGTGGGGCGCAACCTCGCTGCGATGATGCTCAACGGCCTGGCACTCGGTGCGGTGCTCTTCGTTGCGG
CGCTCGTGCCCCTGATGCTGGGCCTGCTGGTCGCGATGCCGGTGCTGTTCGGCTCGCTCTATGCGTCGTATCAGGCGATC
TTCGCGGTGTGGGCGGATGACGCGACGCCGGCTCAGGCCGGCGACAGCTTGGCGTAG

Upstream 100 bases:

>100_bases
ACGAGACGTCCGTTCCGGGCCGCGCCGGCTCAGCCCACGCCGCACTCGCTTCGCGCCTCGGGCTGCTGCCCGGCCGCAAG
CCTCCATTACAATCCGTCGC

Downstream 100 bases:

>100_bases
GCGAGCGCAAGCCACTTCGTTCCATCACGGAACTTGACCTGCACGCGCGCGTCGGGCCCGCGTCCTTCGAAGTCGATGAT
GATGCCGGTGCCGAACCTGG

Product: transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNTPSSQDIPRRVAAAEGFRWVAAGFRLYRKNPLLLSAAFGVLFGVVMALGLIPVIGGSLSELASPLMVAGFMAAYRALD
EGRELELPQFLAGVRGPAIPLATVGAVQLLGTLAIGQVMLAMGFDPQALMAAAQSQKDPQEMQAVLDQSMPAMLTGLLLF
LPLIMATWFAPALILFGGARPLTALGVSFKAVGRNLAAMMLNGLALGAVLFVAALVPLMLGLLVAMPVLFGSLYASYQAI
FAVWADDATPAQAGDSLA

Sequences:

>Translated_258_residues
MNTPSSQDIPRRVAAAEGFRWVAAGFRLYRKNPLLLSAAFGVLFGVVMALGLIPVIGGSLSELASPLMVAGFMAAYRALD
EGRELELPQFLAGVRGPAIPLATVGAVQLLGTLAIGQVMLAMGFDPQALMAAAQSQKDPQEMQAVLDQSMPAMLTGLLLF
LPLIMATWFAPALILFGGARPLTALGVSFKAVGRNLAAMMLNGLALGAVLFVAALVPLMLGLLVAMPVLFGSLYASYQAI
FAVWADDATPAQAGDSLA
>Mature_258_residues
MNTPSSQDIPRRVAAAEGFRWVAAGFRLYRKNPLLLSAAFGVLFGVVMALGLIPVIGGSLSELASPLMVAGFMAAYRALD
EGRELELPQFLAGVRGPAIPLATVGAVQLLGTLAIGQVMLAMGFDPQALMAAAQSQKDPQEMQAVLDQSMPAMLTGLLLF
LPLIMATWFAPALILFGGARPLTALGVSFKAVGRNLAAMMLNGLALGAVLFVAALVPLMLGLLVAMPVLFGSLYASYQAI
FAVWADDATPAQAGDSLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26860; Mature: 26860

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCCCCCCCCC
>Mature Secondary Structure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HHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA