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The map label for this gene is rlpB [C]

Identifier: 74318462

GI number: 74318462

Start: 2513215

End: 2513706

Strand: Reverse

Name: rlpB [C]

Synonym: Tbd_2444

Alternate gene names: 74318462

Gene position: 2513706-2513215 (Counterclockwise)

Preceding gene: 74318463

Following gene: 74318461

Centisome position: 86.39

GC content: 67.89

Gene sequence:

>492_bases
ATGAACAGACGCCTCTTCCTCGCCGTGCTGCCGGCCGCGCTTGCTGCGGGCTGCGGCTTCCAACTGCGCCGCACCGCGGG
CATCCCGTTCAAGAGCCTTTATCTCGACGCGCCAGGCGGCAGCGCGGTCGCGCAACGCCTGCGCAGCCTGCTGACCGCGA
ACCGCAAGACACGGCTTGTGACGGTGCCCGGTGAGGCCGAAGCGCTGCTCAAGCTGACGCAGGAGGTACGCAGCAAGAGG
ATCCTTTCGCTGTCGGGCGCCGGGCGCGTGACCGAATACCGGCTCGGCCTCACGCTTTCCTACAGCATCGTCGGCCCGGA
CGAACGGGTTCTTGCCGAGCCCGAGTCCCTCGAACTCAACCGCGACATGACCTATGACGATTCGCAACTGCTGGCCAAGG
GCGCCGAGGAGCAGCTGCTGTACCGCGACATGGAAGACAGCGCGGCGCGGCGGATCCTGCGCCGGCTGCAGGCGCTCGGC
GGCGACACTTGA

Upstream 100 bases:

>100_bases
AGGCCGCGGCACTGGCGAGTGAGGCAGTGCAGAAGTACCTCGCCGGCCAGACACCGAAAAAAGTCGTCGTCGTGCCCGGG
CGTTTGGTTAACATCGTCGC

Downstream 100 bases:

>100_bases
ACGTCACGAGCGACCGTCTGCCGGAGCAGCTTGCGCGCGGCCTCGCCCCGCTCTACGTGCTGGTCGGCGACGAGCCGCTG
GCGGCGCAGGAAGCGGGCGA

Product: putative lipoprotein B transmembrane

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNRRLFLAVLPAALAAGCGFQLRRTAGIPFKSLYLDAPGGSAVAQRLRSLLTANRKTRLVTVPGEAEALLKLTQEVRSKR
ILSLSGAGRVTEYRLGLTLSYSIVGPDERVLAEPESLELNRDMTYDDSQLLAKGAEEQLLYRDMEDSAARRILRRLQALG
GDT

Sequences:

>Translated_163_residues
MNRRLFLAVLPAALAAGCGFQLRRTAGIPFKSLYLDAPGGSAVAQRLRSLLTANRKTRLVTVPGEAEALLKLTQEVRSKR
ILSLSGAGRVTEYRLGLTLSYSIVGPDERVLAEPESLELNRDMTYDDSQLLAKGAEEQLLYRDMEDSAARRILRRLQALG
GDT
>Mature_163_residues
MNRRLFLAVLPAALAAGCGFQLRRTAGIPFKSLYLDAPGGSAVAQRLRSLLTANRKTRLVTVPGEAEALLKLTQEVRSKR
ILSLSGAGRVTEYRLGLTLSYSIVGPDERVLAEPESLELNRDMTYDDSQLLAKGAEEQLLYRDMEDSAARRILRRLQALG
GDT

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17903; Mature: 17903

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRLFLAVLPAALAAGCGFQLRRTAGIPFKSLYLDAPGGSAVAQRLRSLLTANRKTRLV
CCCEEEHHHHHHHHHHCCCCEEECCCCCCHHHEEEECCCCHHHHHHHHHHHHCCCCEEEE
TVPGEAEALLKLTQEVRSKRILSLSGAGRVTEYRLGLTLSYSIVGPDERVLAEPESLELN
ECCCCHHHHHHHHHHHHHHHEEEECCCCCCEEEEECEEEEEEEECCCHHHHCCCCCCCCC
RDMTYDDSQLLAKGAEEQLLYRDMEDSAARRILRRLQALGGDT
CCCCCCHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRRLFLAVLPAALAAGCGFQLRRTAGIPFKSLYLDAPGGSAVAQRLRSLLTANRKTRLV
CCCEEEHHHHHHHHHHCCCCEEECCCCCCHHHEEEECCCCHHHHHHHHHHHHCCCCEEEE
TVPGEAEALLKLTQEVRSKRILSLSGAGRVTEYRLGLTLSYSIVGPDERVLAEPESLELN
ECCCCHHHHHHHHHHHHHHHEEEECCCCCCEEEEECEEEEEEEECCCHHHHCCCCCCCCC
RDMTYDDSQLLAKGAEEQLLYRDMEDSAARRILRRLQALGGDT
CCCCCCHHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA