Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is yiaL [H]

Identifier: 74318447

GI number: 74318447

Start: 2499471

End: 2499929

Strand: Reverse

Name: yiaL [H]

Synonym: Tbd_2429

Alternate gene names: 74318447

Gene position: 2499929-2499471 (Counterclockwise)

Preceding gene: 74318448

Following gene: 74318446

Centisome position: 85.91

GC content: 67.76

Gene sequence:

>459_bases
GTGATCCTCGCCCCGCTTGCGCACGCCGAGCGCTACCTGGCCCTGCACCCGCTGTTTTCCGAGGCCTTCGCCTTCCTGCG
CCGGTTCGATCTGGATACGCTCGCGCCCGGCATCCATGCGGTCCGCGGCGACAGCGTCTTCGCCATCGTCGAGGCGGCGG
AAGGCCGGACGCGCGAGGCTGCCAGACTCGAAAGTCATCGTCGCTATATCGATATCCAGCTCATACTCGAGGGGGTCGAC
GAGATGGGCTGGCGGCCGCTGTCGCAGTGCCGGCAGCCGCTCGGCGACCACGATGAAGACCGTGACATCCGTTTCTTCGC
CGATGCGCCGGCCACCTGGGTCGCGGCGCACGCCGGGATGTTCTGCGTGTTCTTTCCGGAAGACGCGCACGCGCCGCTCG
TGAGTTCGGGGCCGCTGCGCAAGGTCGTGATGAAGGTGGCGGTCGACGCGTCACCCTGA

Upstream 100 bases:

>100_bases
ACTACCAGGAATACGAGGCCGACAAGAAGAAACGGCTGGGTGAGGAGGGCGCGAAGCCCAAGCGCATCCGCTACAAGCCG
ATCAGCCGCTGAGCACGCCC

Downstream 100 bases:

>100_bases
CCGAGGGCGCGGGTCTCAAGTGCAGGGCAAGGCTGCCGTTATCGTTCTACCTTGAACCTTAGCCTGCCATGCGCCTCGTC
CTGCTGGTCCTGTTGAGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MILAPLAHAERYLALHPLFSEAFAFLRRFDLDTLAPGIHAVRGDSVFAIVEAAEGRTREAARLESHRRYIDIQLILEGVD
EMGWRPLSQCRQPLGDHDEDRDIRFFADAPATWVAAHAGMFCVFFPEDAHAPLVSSGPLRKVVMKVAVDASP

Sequences:

>Translated_152_residues
MILAPLAHAERYLALHPLFSEAFAFLRRFDLDTLAPGIHAVRGDSVFAIVEAAEGRTREAARLESHRRYIDIQLILEGVD
EMGWRPLSQCRQPLGDHDEDRDIRFFADAPATWVAAHAGMFCVFFPEDAHAPLVSSGPLRKVVMKVAVDASP
>Mature_152_residues
MILAPLAHAERYLALHPLFSEAFAFLRRFDLDTLAPGIHAVRGDSVFAIVEAAEGRTREAARLESHRRYIDIQLILEGVD
EMGWRPLSQCRQPLGDHDEDRDIRFFADAPATWVAAHAGMFCVFFPEDAHAPLVSSGPLRKVVMKVAVDASP

Specific function: Unknown

COG id: COG2731

COG function: function code G; Beta-galactosidase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yhcH/yiaL/yjgK family [H]

Homologues:

Organism=Escherichia coli, GI1790001, Length=136, Percent_Identity=30.1470588235294, Blast_Score=71, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004375 [H]

Pfam domain/function: PF04074 DUF386 [H]

EC number: NA

Molecular weight: Translated: 16935; Mature: 16935

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILAPLAHAERYLALHPLFSEAFAFLRRFDLDTLAPGIHAVRGDSVFAIVEAAEGRTREA
CEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEECCCCEEEEEECCCCCCHHH
ARLESHRRYIDIQLILEGVDEMGWRPLSQCRQPLGDHDEDRDIRFFADAPATWVAAHAGM
HHHHHHHHEEHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHCCCE
FCVFFPEDAHAPLVSSGPLRKVVMKVAVDASP
EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MILAPLAHAERYLALHPLFSEAFAFLRRFDLDTLAPGIHAVRGDSVFAIVEAAEGRTREA
CEECCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEECCCCEEEEEECCCCCCHHH
ARLESHRRYIDIQLILEGVDEMGWRPLSQCRQPLGDHDEDRDIRFFADAPATWVAAHAGM
HHHHHHHHEEHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCEEEEECCCHHHHHHCCCE
FCVFFPEDAHAPLVSSGPLRKVVMKVAVDASP
EEEECCCCCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]