| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is yqeY [H]
Identifier: 74318404
GI number: 74318404
Start: 2457782
End: 2458228
Strand: Direct
Name: yqeY [H]
Synonym: Tbd_2386
Alternate gene names: 74318404
Gene position: 2457782-2458228 (Clockwise)
Preceding gene: 74318403
Following gene: 74318405
Centisome position: 84.47
GC content: 63.76
Gene sequence:
>447_bases ATGTCGCTGCGGACCCGCATCACCGACGACATGAAGAGCGCCATGCGCGCCAAGGAAACGGCGCGCCTCGGTACGATCCG CCTGCTGCTGGCTGCCATCAAGCAGAAAGAGGTCGACGACCGTACCGAGCTAGACGATGCGGCCGTCACCGGCATCGTCG AGAAACTGATCAAGCAACGCAAGGATTCGATCGGCCAGTTCGCAGCTGCCGGGCGGGACGATCTCGTCGCCGCTGAACAG GCCGAACTCGCCGTTCTGCTGACCTATCTCCCCGAGCAATTGTCGGCCGACGAGGTGGAAACAGCGGTCGCCCACGCGAT CAGCGAGTCCGGTGCAACTTCCGTCAAAGATATGGGCAAGGTCATGACGCTGCTGAAGCCGCGTCTCGCCGGCCGGGCCG ACATGGCGCAGGTTTCCGCGCTCATCAAGGCGCGCTTGGCAGGCTGA
Upstream 100 bases:
>100_bases CGCGGTCAAGCGCCAGAGCAAGCGCCTGCGCAGCCAGCAACTGCCGCCCAAGATGTATTGATTCTGCGCGCGCAGAATTT CCCCGCCTAACACCTCGATC
Downstream 100 bases:
>100_bases CCCTTCGCCCGGCCCAGCCCCAGCCGGCCGGGTCTATCATGCGGTAAACATGATTCCGCGCGATTTCATCGATACCCTGC TGAGCCGCGTCGACATTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MSLRTRITDDMKSAMRAKETARLGTIRLLLAAIKQKEVDDRTELDDAAVTGIVEKLIKQRKDSIGQFAAAGRDDLVAAEQ AELAVLLTYLPEQLSADEVETAVAHAISESGATSVKDMGKVMTLLKPRLAGRADMAQVSALIKARLAG
Sequences:
>Translated_148_residues MSLRTRITDDMKSAMRAKETARLGTIRLLLAAIKQKEVDDRTELDDAAVTGIVEKLIKQRKDSIGQFAAAGRDDLVAAEQ AELAVLLTYLPEQLSADEVETAVAHAISESGATSVKDMGKVMTLLKPRLAGRADMAQVSALIKARLAG >Mature_147_residues SLRTRITDDMKSAMRAKETARLGTIRLLLAAIKQKEVDDRTELDDAAVTGIVEKLIKQRKDSIGQFAAAGRDDLVAAEQA ELAVLLTYLPEQLSADEVETAVAHAISESGATSVKDMGKVMTLLKPRLAGRADMAQVSALIKARLAG
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6324789, Length=82, Percent_Identity=43.9024390243902, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 15891; Mature: 15759
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRTRITDDMKSAMRAKETARLGTIRLLLAAIKQKEVDDRTELDDAAVTGIVEKLIKQR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH KDSIGQFAAAGRDDLVAAEQAELAVLLTYLPEQLSADEVETAVAHAISESGATSVKDMGK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH VMTLLKPRLAGRADMAQVSALIKARLAG HHHHHHHHHCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLRTRITDDMKSAMRAKETARLGTIRLLLAAIKQKEVDDRTELDDAAVTGIVEKLIKQR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH KDSIGQFAAAGRDDLVAAEQAELAVLLTYLPEQLSADEVETAVAHAISESGATSVKDMGK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHH VMTLLKPRLAGRADMAQVSALIKARLAG HHHHHHHHHCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]