| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is plsC [H]
Identifier: 74318363
GI number: 74318363
Start: 2418791
End: 2419513
Strand: Reverse
Name: plsC [H]
Synonym: Tbd_2345
Alternate gene names: 74318363
Gene position: 2419513-2418791 (Counterclockwise)
Preceding gene: 74318364
Following gene: 74318362
Centisome position: 83.15
GC content: 67.63
Gene sequence:
>723_bases ATGAGCCTCGTCCGCTCGCTGGTCTTCGCGGTCCTGCAGACCGCGCTGACAATCCTTTTCAGTCTGGTCGCCTTGCTGTC CTTCCCGTTTTCGGCGCACGCGCGCTATCGCCTGATCACGGGCTACAACCACACCGTGATCTGGCTCGCACGCTGGGTGC TCGGCATCCGCTACGTCGTCGAGGGGCGCGAGCATCTGCCGGCCGAGCCCGCGGTCATTCTCGCCAAGCACCAGTCGGCA TGGGAGACCGTGGCCTTCCTGTTCCTGTTTCCGCCGGTCTCGCCGGTGATCAAGCAGGAACTGCTCAAAGTGCCGTTCTT CGGCTGGGCCTTCCGCATGCTCTCGCCGATCGCGATCGATCGCGCCGCCGGGCGCGAGGCGCTCAAGCAGATCGTCAGGC AAGGCAAGGACAAGCTCGCGCAGGGATTCTGGGTACTCGTGTTTCCCGAGGGCACCCGCGTCGCGCCCGGCGAGAAGGGC CGCTACGGCATCGGCGGCGCGTGGCTCGCGGCGGAATCGGGCGCCCCGGTGGTGCCGGTCGCGCACAACGCCGGCGAGGT GTGGCCGAAGAACGCCTTCGTCAAGCATCCGGGGACGATCACGGTGCGCATCGGCCCCGCGATCGACAGCCGCGAGAAAA GCGCCGCCGAACTCACCCGGGCGGTCGAAGCCTGGATCGAAGCGGAAATGGGGAGGCTGCCGCCTGCTGCCGCACGCCAA TAG
Upstream 100 bases:
>100_bases GCAAAGGCGAACGCACGCTCGCGGCCGGCGGCATGCCGGACAACACGCCGGTTTATTCCGACCTCAGCGAGGCCGTCGAC CACCTGCTCAAGGCCGTCGC
Downstream 100 bases:
>100_bases CGGCGTCCTCGCCGTCGGCGAGGCGCTCGTGCCATACCGCCTGCGCCGCTCGCGCCGCCGCCAGACGCTGGGCCTGACCG TCACCGCGGGCGAAGTGCGC
Product: phospholipid/glycerol acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSLVRSLVFAVLQTALTILFSLVALLSFPFSAHARYRLITGYNHTVIWLARWVLGIRYVVEGREHLPAEPAVILAKHQSA WETVAFLFLFPPVSPVIKQELLKVPFFGWAFRMLSPIAIDRAAGREALKQIVRQGKDKLAQGFWVLVFPEGTRVAPGEKG RYGIGGAWLAAESGAPVVPVAHNAGEVWPKNAFVKHPGTITVRIGPAIDSREKSAAELTRAVEAWIEAEMGRLPPAAARQ
Sequences:
>Translated_240_residues MSLVRSLVFAVLQTALTILFSLVALLSFPFSAHARYRLITGYNHTVIWLARWVLGIRYVVEGREHLPAEPAVILAKHQSA WETVAFLFLFPPVSPVIKQELLKVPFFGWAFRMLSPIAIDRAAGREALKQIVRQGKDKLAQGFWVLVFPEGTRVAPGEKG RYGIGGAWLAAESGAPVVPVAHNAGEVWPKNAFVKHPGTITVRIGPAIDSREKSAAELTRAVEAWIEAEMGRLPPAAARQ >Mature_239_residues SLVRSLVFAVLQTALTILFSLVALLSFPFSAHARYRLITGYNHTVIWLARWVLGIRYVVEGREHLPAEPAVILAKHQSAW ETVAFLFLFPPVSPVIKQELLKVPFFGWAFRMLSPIAIDRAAGREALKQIVRQGKDKLAQGFWVLVFPEGTRVAPGEKGR YGIGGAWLAAESGAPVVPVAHNAGEVWPKNAFVKHPGTITVRIGPAIDSREKSAAELTRAVEAWIEAEMGRLPPAAARQ
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6320151, Length=195, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 26390; Mature: 26259
Theoretical pI: Translated: 10.71; Mature: 10.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVRSLVFAVLQTALTILFSLVALLSFPFSAHARYRLITGYNHTVIWLARWVLGIRYVV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH EGREHLPAEPAVILAKHQSAWETVAFLFLFPPVSPVIKQELLKVPFFGWAFRMLSPIAID CCHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH RAAGREALKQIVRQGKDKLAQGFWVLVFPEGTRVAPGEKGRYGIGGAWLAAESGAPVVPV HHHHHHHHHHHHHHCHHHHHCCEEEEEECCCCEECCCCCCCCCCCEEEEEECCCCCEEEE AHNAGEVWPKNAFVKHPGTITVRIGPAIDSREKSAAELTRAVEAWIEAEMGRLPPAAARQ ECCCCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SLVRSLVFAVLQTALTILFSLVALLSFPFSAHARYRLITGYNHTVIWLARWVLGIRYVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHH EGREHLPAEPAVILAKHQSAWETVAFLFLFPPVSPVIKQELLKVPFFGWAFRMLSPIAID CCHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH RAAGREALKQIVRQGKDKLAQGFWVLVFPEGTRVAPGEKGRYGIGGAWLAAESGAPVVPV HHHHHHHHHHHHHHCHHHHHCCEEEEEECCCCEECCCCCCCCCCCEEEEEECCCCCEEEE AHNAGEVWPKNAFVKHPGTITVRIGPAIDSREKSAAELTRAVEAWIEAEMGRLPPAAARQ ECCCCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403685; 7812434 [H]