| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is cyaE [H]
Identifier: 74318339
GI number: 74318339
Start: 2396006
End: 2397391
Strand: Reverse
Name: cyaE [H]
Synonym: Tbd_2321
Alternate gene names: 74318339
Gene position: 2397391-2396006 (Counterclockwise)
Preceding gene: 74318340
Following gene: 74318338
Centisome position: 82.39
GC content: 73.74
Gene sequence:
>1386_bases TTGAAGTCCTCCCTGTTCATTCTCTGGACGGCTGCGAGCGCCGGCATCGTCCACGCCGCCGCGCTCGAACCGCCTGCGCG GCCGGGTAGCTTCTGGCTGCCACCGCACGCCGTGGCCGAGCCGGCGCCGGCCATCGCGGCGCCGGTCCGTTTCGACAGCC TCGCGGCCTTGACCGATCACGCCTTGCGCGAGCGCGCCGAATCGCGCGCGGCGTGGCTCGCGGCGCAGGCCGAGGCGGCT CGCCTCGACGCAGCGACAGCCGAACTGTGGCCCAGCGTGACGGGGCAATTCAACTTCACGCGCAGCCGTGGCCTGTCGAG TTCGGGCGCGCCGGTCGCCACCCTGCATCGTTACGGGCCGAGTCTGAGCCTGAGCTACGTGCTGTTCGACTTCGGGGCGC GCGCGGCAGGCGTCGACGCCCAGCGCTACCGGTTGATCGCGAGTCTGCTATCGGCCAACCGCGCGCTCCAGGACGTGATT GCCGCGGTCGAGGCCGCGTATTACGGCGTGCAGGCGGCGGCAGCCCTGGTCGACGCCCAGGCGCAGCAGGAAGCCGCCCT GCGCACGAGTCTCGAGGCCGTCGAGGTCAGACTCCAGGCCGGACTCGCGGCGCGCGCCGATCGGCTGCGCGCCGAGGCGG CGCTGGTCGAGGCGCAACTCGCGCGCGAGGCCGCGGAACGCGACCAGGCAAACGCCATGGCGACGCTGAAGCAGGCCGCG GGAATCGCGCAGACCCAGCCGCTGACGCTGGCCTGGGACGTCGCGCCGCCAGCCTTGCCGGAGGTCGACGCACTGCTTGC CGACCTGCTCGCCGAGGCCGAGCGGCAGCGCCCCGATCTGCATGCGCTGCAGGCGACCGCGGCCAGCGCGCGGGCAGTGG CCGAGCGCGCCCGCGCCGCGCGCTGGCCGAGCGTGTCGCTCGCGGCGAACAGCGGCCGTACGTTTTTTCTCGAGGACGAA CGGGTGCCATCGACGACGTATAGCGTCGGCCTCAGCGTCGCGCTTCCCCTATTCGACGGCGGCCGGCTCGCCGCCGAAGC GCGCGCGGCGGCGCGCGAGGCCGAGCGTCTGCAGGCCGAGGCCGAGGTGCAGCGCAGCCAGGTCGCGCTCGCGATCACGC GCGCCTACCACGACGTGCGTCACGCCCAGTCGCGCCGCGCCGGCGTCGCGGTGCAGTTCGAGAGCGCTGCCGAGTCGGCA CGCGCAGCCGAGGCGCGCTACCGCGCCGGGGTGGGCAGCCTGCTTGAATGGCTGACCGCACAGGCCGACCTCGCACGCGC CCGCCAGGTGCGCGCCCAGTCCGACAGCGACTGGCTCGCCGCGTTTTCGGCCCTCAATCACGCGCTCGGACGTTTGCCGG GCGCCTCACCGGGAACGCCGCCATGA
Upstream 100 bases:
>100_bases AGCTGTAGGCGGCCATGCCCGTTGCGGCCCTGCCGAGGCGGCCGTGAGCGGGCACCCGGGGCGGTGGGGCGCCTGTGAAG TCGTTTAGAATTCAAACACC
Downstream 100 bases:
>100_bases AACTGCGCATTCTTGTGTCGATCGTCGTGCTGGCGCTGCTCGCTGCGGTCGTTTATCGCGTCCAGCAGCAAGGCGCGGGC GAGCGCCGCGGCAGCGGCGA
Product: putative secretion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKSSLFILWTAASAGIVHAAALEPPARPGSFWLPPHAVAEPAPAIAAPVRFDSLAALTDHALRERAESRAAWLAAQAEAA RLDAATAELWPSVTGQFNFTRSRGLSSSGAPVATLHRYGPSLSLSYVLFDFGARAAGVDAQRYRLIASLLSANRALQDVI AAVEAAYYGVQAAAALVDAQAQQEAALRTSLEAVEVRLQAGLAARADRLRAEAALVEAQLAREAAERDQANAMATLKQAA GIAQTQPLTLAWDVAPPALPEVDALLADLLAEAERQRPDLHALQATAASARAVAERARAARWPSVSLAANSGRTFFLEDE RVPSTTYSVGLSVALPLFDGGRLAAEARAAAREAERLQAEAEVQRSQVALAITRAYHDVRHAQSRRAGVAVQFESAAESA RAAEARYRAGVGSLLEWLTAQADLARARQVRAQSDSDWLAAFSALNHALGRLPGASPGTPP
Sequences:
>Translated_461_residues MKSSLFILWTAASAGIVHAAALEPPARPGSFWLPPHAVAEPAPAIAAPVRFDSLAALTDHALRERAESRAAWLAAQAEAA RLDAATAELWPSVTGQFNFTRSRGLSSSGAPVATLHRYGPSLSLSYVLFDFGARAAGVDAQRYRLIASLLSANRALQDVI AAVEAAYYGVQAAAALVDAQAQQEAALRTSLEAVEVRLQAGLAARADRLRAEAALVEAQLAREAAERDQANAMATLKQAA GIAQTQPLTLAWDVAPPALPEVDALLADLLAEAERQRPDLHALQATAASARAVAERARAARWPSVSLAANSGRTFFLEDE RVPSTTYSVGLSVALPLFDGGRLAAEARAAAREAERLQAEAEVQRSQVALAITRAYHDVRHAQSRRAGVAVQFESAAESA RAAEARYRAGVGSLLEWLTAQADLARARQVRAQSDSDWLAAFSALNHALGRLPGASPGTPP >Mature_461_residues MKSSLFILWTAASAGIVHAAALEPPARPGSFWLPPHAVAEPAPAIAAPVRFDSLAALTDHALRERAESRAAWLAAQAEAA RLDAATAELWPSVTGQFNFTRSRGLSSSGAPVATLHRYGPSLSLSYVLFDFGARAAGVDAQRYRLIASLLSANRALQDVI AAVEAAYYGVQAAAALVDAQAQQEAALRTSLEAVEVRLQAGLAARADRLRAEAALVEAQLAREAAERDQANAMATLKQAA GIAQTQPLTLAWDVAPPALPEVDALLADLLAEAERQRPDLHALQATAASARAVAERARAARWPSVSLAANSGRTFFLEDE RVPSTTYSVGLSVALPLFDGGRLAAEARAAAREAERLQAEAEVQRSQVALAITRAYHDVRHAQSRRAGVAVQFESAAESA RAAEARYRAGVGSLLEWLTAQADLARARQVRAQSDSDWLAAFSALNHALGRLPGASPGTPP
Specific function: CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]
Homologues:
None
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003423 [H]
Pfam domain/function: PF02321 OEP [H]
EC number: NA
Molecular weight: Translated: 48621; Mature: 48621
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSSLFILWTAASAGIVHAAALEPPARPGSFWLPPHAVAEPAPAIAAPVRFDSLAALTDH CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH ALRERAESRAAWLAAQAEAARLDAATAELWPSVTGQFNFTRSRGLSSSGAPVATLHRYGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCCCCCCHHHHHHCCC SLSLSYVLFDFGARAAGVDAQRYRLIASLLSANRALQDVIAAVEAAYYGVQAAAALVDAQ CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQQEAALRTSLEAVEVRLQAGLAARADRLRAEAALVEAQLAREAAERDQANAMATLKQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIAQTQPLTLAWDVAPPALPEVDALLADLLAEAERQRPDLHALQATAASARAVAERARAA CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RWPSVSLAANSGRTFFLEDERVPSTTYSVGLSVALPLFDGGRLAAEARAAAREAERLQAE CCCCEEEEECCCCEEEEECCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH AEVQRSQVALAITRAYHDVRHAQSRRAGVAVQFESAAESARAAEARYRAGVGSLLEWLTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH QADLARARQVRAQSDSDWLAAFSALNHALGRLPGASPGTPP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKSSLFILWTAASAGIVHAAALEPPARPGSFWLPPHAVAEPAPAIAAPVRFDSLAALTDH CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH ALRERAESRAAWLAAQAEAARLDAATAELWPSVTGQFNFTRSRGLSSSGAPVATLHRYGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCCCCCCCCHHHHHHCCC SLSLSYVLFDFGARAAGVDAQRYRLIASLLSANRALQDVIAAVEAAYYGVQAAAALVDAQ CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AQQEAALRTSLEAVEVRLQAGLAARADRLRAEAALVEAQLAREAAERDQANAMATLKQAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIAQTQPLTLAWDVAPPALPEVDALLADLLAEAERQRPDLHALQATAASARAVAERARAA CCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RWPSVSLAANSGRTFFLEDERVPSTTYSVGLSVALPLFDGGRLAAEARAAAREAERLQAE CCCCEEEEECCCCEEEEECCCCCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH AEVQRSQVALAITRAYHDVRHAQSRRAGVAVQFESAAESARAAEARYRAGVGSLLEWLTA HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH QADLARARQVRAQSDSDWLAAFSALNHALGRLPGASPGTPP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2905265; 12910271 [H]