| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318287
Identifier: 74318287
GI number: 74318287
Start: 2340520
End: 2341320
Strand: Direct
Name: 74318287
Synonym: Tbd_2269
Alternate gene names: NA
Gene position: 2340520-2341320 (Clockwise)
Preceding gene: 74318285
Following gene: 74318289
Centisome position: 80.44
GC content: 69.54
Gene sequence:
>801_bases ATGAAAAGACTCGTCATCGCGGCCGCCATCTTAGCATCGGCCCTTGCGGCGCCCGCGCGCGGCGCCGACGTCGAACTCGT CAAGGCCACGATCCGCGCGGCCGACGGCAGCGACGTCCCGGTCGAGGTCGCGACGCCTGCCGGCAAGGGTCCGTTCCCGC CGGTCCTCTTCATCCACGCCAAGCGCGGCTACGAAGGCGACGAGCGCGCCCACGTGCGGGAGCTTGCGGCCCAGGGCTTC CTCGTCGTCGCCCCGGACTGGCAGAGCGGCCGCTTCATCGAGCGCTGGCCGTCGGCGCACGACCCCGAGACCGAGATGGA CGTCGAGGCCGGGCTCGACTATCTGAAGTCGCTGCCGAACGCGTGCAAGGGCAAGGTCGGCGTCGTCGGCCTGTCACGCG GGCCCTATTACGCGATCCGGCTCGCCGCCAAGCGCGGCGCCGACCTCGCCGCGATCGTGAGCTACTACGGCCACATGCAG AACCCCAACGCGCCCGAGCCGGACCAACTCTTCCGCATCGCGCCCGAAGTCACGCAGATCACGACGCCGATGCTGTTCCT GATCGGCGACGCCGACTACGAGCTGCGCCGCATGAACGGCGGACGCGCGTTCTATGCGCTGTGGGAGCGCGGGGTGCCGG TGGAATGGCAGGAATACCCGATGGCGCGGCGCGCGTTCGACTTCCGTCCGGACCAGACGCCGGAGGAAAAAGTCGCGACG CGGCACGCGCGCGAGCGGGCCAAGAACTGGCTCGTGCAATGGATGAAGCTCTCGCCCGACATGCGCTGCGCACGTTCCTG A
Upstream 100 bases:
>100_bases GTCCTGCGCGAACCGGGGCCGCGTCAGGTACGTTTGGACTGCAGGGAAAAGCGACGCGGCGGCCCTAGAATGAGGCCGGG ACACAGCCAGGGAGCACAGC
Downstream 100 bases:
>100_bases ACGCCCGGGCCGACCCCGGCGTTCAGCGCGACCAGCCCCACTTGCGGAAGATCGCCTCGCCCGCGTCGGAGGCGAGGAAG TCGACGAATTCGCGGGCCGG
Product: putative dienelactone hydrolase
Products: NA
Alternate protein names: Carboxymethylenebutenolidase
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKRLVIAAAILASALAAPARGADVELVKATIRAADGSDVPVEVATPAGKGPFPPVLFIHAKRGYEGDERAHVRELAAQGF LVVAPDWQSGRFIERWPSAHDPETEMDVEAGLDYLKSLPNACKGKVGVVGLSRGPYYAIRLAAKRGADLAAIVSYYGHMQ NPNAPEPDQLFRIAPEVTQITTPMLFLIGDADYELRRMNGGRAFYALWERGVPVEWQEYPMARRAFDFRPDQTPEEKVAT RHARERAKNWLVQWMKLSPDMRCARS
Sequences:
>Translated_266_residues MKRLVIAAAILASALAAPARGADVELVKATIRAADGSDVPVEVATPAGKGPFPPVLFIHAKRGYEGDERAHVRELAAQGF LVVAPDWQSGRFIERWPSAHDPETEMDVEAGLDYLKSLPNACKGKVGVVGLSRGPYYAIRLAAKRGADLAAIVSYYGHMQ NPNAPEPDQLFRIAPEVTQITTPMLFLIGDADYELRRMNGGRAFYALWERGVPVEWQEYPMARRAFDFRPDQTPEEKVAT RHARERAKNWLVQWMKLSPDMRCARS >Mature_266_residues MKRLVIAAAILASALAAPARGADVELVKATIRAADGSDVPVEVATPAGKGPFPPVLFIHAKRGYEGDERAHVRELAAQGF LVVAPDWQSGRFIERWPSAHDPETEMDVEAGLDYLKSLPNACKGKVGVVGLSRGPYYAIRLAAKRGADLAAIVSYYGHMQ NPNAPEPDQLFRIAPEVTQITTPMLFLIGDADYELRRMNGGRAFYALWERGVPVEWQEYPMARRAFDFRPDQTPEEKVAT RHARERAKNWLVQWMKLSPDMRCARS
Specific function: Unknown
COG id: COG0412
COG function: function code Q; Dienelactone hydrolase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29540; Mature: 29540
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLVIAAAILASALAAPARGADVELVKATIRAADGSDVPVEVATPAGKGPFPPVLFIHA CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEE KRGYEGDERAHVRELAAQGFLVVAPDWQSGRFIERWPSAHDPETEMDVEAGLDYLKSLPN CCCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCHH ACKGKVGVVGLSRGPYYAIRLAAKRGADLAAIVSYYGHMQNPNAPEPDQLFRIAPEVTQI HHCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHH TTPMLFLIGDADYELRRMNGGRAFYALWERGVPVEWQEYPMARRAFDFRPDQTPEEKVAT CCCEEEEEECCCCEEEECCCCEEEEEEHHCCCCCCHHHCCHHHHHCCCCCCCCHHHHHHH RHARERAKNWLVQWMKLSPDMRCARS HHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MKRLVIAAAILASALAAPARGADVELVKATIRAADGSDVPVEVATPAGKGPFPPVLFIHA CCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEEE KRGYEGDERAHVRELAAQGFLVVAPDWQSGRFIERWPSAHDPETEMDVEAGLDYLKSLPN CCCCCCCHHHHHHHHHHCCEEEECCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHCHH ACKGKVGVVGLSRGPYYAIRLAAKRGADLAAIVSYYGHMQNPNAPEPDQLFRIAPEVTQI HHCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHH TTPMLFLIGDADYELRRMNGGRAFYALWERGVPVEWQEYPMARRAFDFRPDQTPEEKVAT CCCEEEEEECCCCEEEECCCCEEEEEEHHCCCCCCHHHCCHHHHHCCCCCCCCHHHHHHH RHARERAKNWLVQWMKLSPDMRCARS HHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA