| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318278
Identifier: 74318278
GI number: 74318278
Start: 2333917
End: 2334717
Strand: Reverse
Name: 74318278
Synonym: Tbd_2260
Alternate gene names: NA
Gene position: 2334717-2333917 (Counterclockwise)
Preceding gene: 74318279
Following gene: 74318277
Centisome position: 80.24
GC content: 68.16
Gene sequence:
>801_bases ATGCCCAGGAGTGCGCTGCTGCTGAGTCTGATCGTCACCGTCGCGACACCCGCGCTCGCGGCCGACGCGGTCGAGACGCC GACCCATCCGCCCGGTGCCGAGGCCTCTTCCAAGACCCAGGTGCTGAAGGCCGGCTCCGCGGTGCTGCAGTCCGAAAGCC CGCTCAAACCCATGCACGTCCATCTAAGCGGTTTTCACGCGATGAAGAACGACCCCGCGCACCAGATGGCGGCCGAGCAC TACTGCAGCCAGGTCAACGAGGACTTCGCGCAGTGTGCGCTGTTCGACGGCAACACGCGGAGCGCCAACCTGACCGGTAT CGAATACATCATTTCGGAAAAGCTCTTCAAGCAGCTACCGGCGCAGGAGAGGCAGTACTGGCACCCCCACAACTACGAGA TCCTGTCGGGCCAGCTCGTCGCGCCGGGGCTGCCGGACGTCGCCGAGAAGGCCTTGATGAAAGGCAAGATGAACAGCTAC GGCAAGACCTGGCACGTCTGGAACACGGGGGACGCCACGAAAAAGGGCGACCCCTTGCCGTACGGCGACCCGGCGCTCGC CTGGTCGTTCAACCGCGACGGCGAGGCCGACGCAGGCATGGTCCAGCGCCGCGACCGCGCACTCGAGATCGACCCGGTGA AGAAGCGCCGCGGACGCGCCGACCTGACCCCGCTCGCGCGGCCGCAGCAGGGCGTCGACGCCCTGCACGGCAAGTTCGCC GGCCCGGGCCAACCCGTACCTGGCGTCCTCGAGGCCGCCGGCAGCACCGGCCCGGCGCCACGTCCGACCGTCCCGCGTTG A
Upstream 100 bases:
>100_bases GGCGCTGCGCATTTCGCGCGGCGCCGTCGCGCGAAGCAGGGCACACACGAACCGGACGCGCGTGCAGGAAGTGCGAGTCG GGACACGTCGAGGAAATCCC
Downstream 100 bases:
>100_bases GCGGGACATCATCCGGAGGGACAGATCATGCCCAGAGGTGACAAATCCAGTTACAGCGGCAAACAGAAACGGCAGGCCGA GCACATCGAGGAAGGCTATC
Product: hypothetical protein
Products: NA
Alternate protein names: Secreted Protein; Embryo-Specific Protein
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MPRSALLLSLIVTVATPALAADAVETPTHPPGAEASSKTQVLKAGSAVLQSESPLKPMHVHLSGFHAMKNDPAHQMAAEH YCSQVNEDFAQCALFDGNTRSANLTGIEYIISEKLFKQLPAQERQYWHPHNYEILSGQLVAPGLPDVAEKALMKGKMNSY GKTWHVWNTGDATKKGDPLPYGDPALAWSFNRDGEADAGMVQRRDRALEIDPVKKRRGRADLTPLARPQQGVDALHGKFA GPGQPVPGVLEAAGSTGPAPRPTVPR
Sequences:
>Translated_266_residues MPRSALLLSLIVTVATPALAADAVETPTHPPGAEASSKTQVLKAGSAVLQSESPLKPMHVHLSGFHAMKNDPAHQMAAEH YCSQVNEDFAQCALFDGNTRSANLTGIEYIISEKLFKQLPAQERQYWHPHNYEILSGQLVAPGLPDVAEKALMKGKMNSY GKTWHVWNTGDATKKGDPLPYGDPALAWSFNRDGEADAGMVQRRDRALEIDPVKKRRGRADLTPLARPQQGVDALHGKFA GPGQPVPGVLEAAGSTGPAPRPTVPR >Mature_265_residues PRSALLLSLIVTVATPALAADAVETPTHPPGAEASSKTQVLKAGSAVLQSESPLKPMHVHLSGFHAMKNDPAHQMAAEHY CSQVNEDFAQCALFDGNTRSANLTGIEYIISEKLFKQLPAQERQYWHPHNYEILSGQLVAPGLPDVAEKALMKGKMNSYG KTWHVWNTGDATKKGDPLPYGDPALAWSFNRDGEADAGMVQRRDRALEIDPVKKRRGRADLTPLARPQQGVDALHGKFAG PGQPVPGVLEAAGSTGPAPRPTVPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28644; Mature: 28513
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSALLLSLIVTVATPALAADAVETPTHPPGAEASSKTQVLKAGSAVLQSESPLKPMHV CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE HLSGFHAMKNDPAHQMAAEHYCSQVNEDFAQCALFDGNTRSANLTGIEYIISEKLFKQLP EEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCC AQERQYWHPHNYEILSGQLVAPGLPDVAEKALMKGKMNSYGKTWHVWNTGDATKKGDPLP HHHHHCCCCCCCEEECCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC YGDPALAWSFNRDGEADAGMVQRRDRALEIDPVKKRRGRADLTPLARPQQGVDALHGKFA CCCCCEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCC GPGQPVPGVLEAAGSTGPAPRPTVPR CCCCCCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure PRSALLLSLIVTVATPALAADAVETPTHPPGAEASSKTQVLKAGSAVLQSESPLKPMHV CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEE HLSGFHAMKNDPAHQMAAEHYCSQVNEDFAQCALFDGNTRSANLTGIEYIISEKLFKQLP EEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCC AQERQYWHPHNYEILSGQLVAPGLPDVAEKALMKGKMNSYGKTWHVWNTGDATKKGDPLP HHHHHCCCCCCCEEECCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCC YGDPALAWSFNRDGEADAGMVQRRDRALEIDPVKKRRGRADLTPLARPQQGVDALHGKFA CCCCCEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCC GPGQPVPGVLEAAGSTGPAPRPTVPR CCCCCCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA