| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is cls [H]
Identifier: 74318261
GI number: 74318261
Start: 2317918
End: 2319360
Strand: Direct
Name: cls [H]
Synonym: Tbd_2243
Alternate gene names: 74318261
Gene position: 2317918-2319360 (Clockwise)
Preceding gene: 74318260
Following gene: 74318262
Centisome position: 79.66
GC content: 66.81
Gene sequence:
>1443_bases ATGCCGCATCCGAGCCCCTCACCCATCCCGCGACGCAGTCGCGGCGGGATCGCGGGCCTGACAAGAATCCTGATCGCTTG TTGCGCGGCGCCGCTCTGCGCCTGCGCCACCCTGCCCGAGGCGCCGCGTCTCGCGGCGGGTCCAGTCGCCAGTCCGCCGG TCAATTTCGAGTCCGCTCGCGGCCCGGTTTCGGCACGCCGCAACGCGGCGATCTTCGCCGAGCTCAAGCGCGACGGCGGC GACAGCGCGATCCTGCTGCGCCACCTCGCGCTCGAGGAAGCGGTCAATCGCGACAGCCCGCTCGTCGTCGGCAACCGGCT GACGTTGCTGCAGGACGGGCCGGCGACCTACCGCGCGATGTTCGCCGCGATCCGCAGCGCTCGCGATCACGTCAACCTGC AGACCTATATTTTCGAGGCGGGGCAGACCGGCGAGACCTTCGCGCGCCTGCTGCTCGAGAAACAGGCTGCCGGCGTGCAG GTCAACATCATCTACGACAGTGTCGGCTCGATCGACACGCCGCCCGCTTTCTTCCAGCGGCTGCGCGACGCCGGCATGCG CGTGCTCGAATTCAATCCGGTCAACCCGGCCAAGCTCAAGAAGAAGAAATGGCGGCTCAACAACCGCGATCACCGGAAGC TGCTCGTCGTCGACGGCAAGACGGCTTTTCTCGGCGGGATCAACATCAGCGAGACCTATTCGAGCGGCTCGCTGTCGCGC CCGAGCAAGAAAAAAGCCAAGGACCGTGAATCGGAGGGATGGCGCGACACGCATCTGCAGGTCGACGGTCCTGCCGTCGC CGAATTCCAGAAGCTGTTTCTCGACACCTGGGCGCGGCAGAAAGGCCCGCCGCTGCCCGCGCGCGCGTATTTCCCCAAGC TCGCGCGCCAAGGCAACGAAATCGTGCGCGCGATCGCGAGCGAAGCCGACGAGGGCGACAGCCCGATCTATCTGACGCTG CTCTCGGCGATCGAACACGCCGAGCGCAGCATCCGCCTGACCAACGCGTATTTCGTCCCCGACCCGCAATTGCGCCGGGC GCTCGCCGCCGCGTCCCGGCGCGGCGTCGACGTGCAGATCATCCTGCCGAGCCGGACCGACTCGTGGGCCGTGTTCCACG CCGGACGCTCGCACTACGACGAACTGCTCGACGCCGGCGTGAAGATCTACGAACGCCACGGTACCGTGCTGCACGCCAAG ACCGCGTCGGTCGACGGCGTCTGGTCGACGATCGGTTCGACCAACCTCGACTGGCGCAGCTTTCTTCACAACGACGAGCT CAACGCGGTCGTGCTCGGAACCGACTTCGCCCGCCAGCTCGACGCGATGTTCGTGCGCGACCGGGCGGCATCGGAAAAGA TCGACCTCGAGAAATGGCGTCGTCGCGCGCTGCACATCCGCATGCAGGAATGGATCGCCCGGCGCTTCGAGTACTGGCTG TAG
Upstream 100 bases:
>100_bases CGCTGTCGTCGGGTCGCAGCTGGCTGGAACGGCTCAACGCGGCGGCCGCCGCCGAGGACAGCAGTCCACCGCCGTAATCG CGTGAGGGCGGGGATACGCG
Downstream 100 bases:
>100_bases ATCGCGAGCGCCTCGGAGAACGCGGGAACGGAACTTAATCGCCAACGCGGCGACGAATTCGAGTCGCGCCGAATTACAAG CGGCCCCTTCCGGGCCAGAA
Product: cardiolipin synthetase 2
Products: Biphosphatidylglycerol; Glycerol. [C]
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MPHPSPSPIPRRSRGGIAGLTRILIACCAAPLCACATLPEAPRLAAGPVASPPVNFESARGPVSARRNAAIFAELKRDGG DSAILLRHLALEEAVNRDSPLVVGNRLTLLQDGPATYRAMFAAIRSARDHVNLQTYIFEAGQTGETFARLLLEKQAAGVQ VNIIYDSVGSIDTPPAFFQRLRDAGMRVLEFNPVNPAKLKKKKWRLNNRDHRKLLVVDGKTAFLGGINISETYSSGSLSR PSKKKAKDRESEGWRDTHLQVDGPAVAEFQKLFLDTWARQKGPPLPARAYFPKLARQGNEIVRAIASEADEGDSPIYLTL LSAIEHAERSIRLTNAYFVPDPQLRRALAAASRRGVDVQIILPSRTDSWAVFHAGRSHYDELLDAGVKIYERHGTVLHAK TASVDGVWSTIGSTNLDWRSFLHNDELNAVVLGTDFARQLDAMFVRDRAASEKIDLEKWRRRALHIRMQEWIARRFEYWL
Sequences:
>Translated_480_residues MPHPSPSPIPRRSRGGIAGLTRILIACCAAPLCACATLPEAPRLAAGPVASPPVNFESARGPVSARRNAAIFAELKRDGG DSAILLRHLALEEAVNRDSPLVVGNRLTLLQDGPATYRAMFAAIRSARDHVNLQTYIFEAGQTGETFARLLLEKQAAGVQ VNIIYDSVGSIDTPPAFFQRLRDAGMRVLEFNPVNPAKLKKKKWRLNNRDHRKLLVVDGKTAFLGGINISETYSSGSLSR PSKKKAKDRESEGWRDTHLQVDGPAVAEFQKLFLDTWARQKGPPLPARAYFPKLARQGNEIVRAIASEADEGDSPIYLTL LSAIEHAERSIRLTNAYFVPDPQLRRALAAASRRGVDVQIILPSRTDSWAVFHAGRSHYDELLDAGVKIYERHGTVLHAK TASVDGVWSTIGSTNLDWRSFLHNDELNAVVLGTDFARQLDAMFVRDRAASEKIDLEKWRRRALHIRMQEWIARRFEYWL >Mature_479_residues PHPSPSPIPRRSRGGIAGLTRILIACCAAPLCACATLPEAPRLAAGPVASPPVNFESARGPVSARRNAAIFAELKRDGGD SAILLRHLALEEAVNRDSPLVVGNRLTLLQDGPATYRAMFAAIRSARDHVNLQTYIFEAGQTGETFARLLLEKQAAGVQV NIIYDSVGSIDTPPAFFQRLRDAGMRVLEFNPVNPAKLKKKKWRLNNRDHRKLLVVDGKTAFLGGINISETYSSGSLSRP SKKKAKDRESEGWRDTHLQVDGPAVAEFQKLFLDTWARQKGPPLPARAYFPKLARQGNEIVRAIASEADEGDSPIYLTLL SAIEHAERSIRLTNAYFVPDPQLRRALAAASRRGVDVQIILPSRTDSWAVFHAGRSHYDELLDAGVKIYERHGTVLHAKT ASVDGVWSTIGSTNLDWRSFLHNDELNAVVLGTDFARQLDAMFVRDRAASEKIDLEKWRRRALHIRMQEWIARRFEYWL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=409, Percent_Identity=30.5623471882641, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1787007, Length=343, Percent_Identity=28.5714285714286, Blast_Score=131, Evalue=8e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR015679 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 53387; Mature: 53255
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHPSPSPIPRRSRGGIAGLTRILIACCAAPLCACATLPEAPRLAAGPVASPPVNFESAR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GPVSARRNAAIFAELKRDGGDSAILLRHLALEEAVNRDSPLVVGNRLTLLQDGPATYRAM CCCHHCCCHHEEEEEHHCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCHHHHHH FAAIRSARDHVNLQTYIFEAGQTGETFARLLLEKQAAGVQVNIIYDSVGSIDTPPAFFQR HHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHH LRDAGMRVLEFNPVNPAKLKKKKWRLNNRDHRKLLVVDGKTAFLGGINISETYSSGSLSR HHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCC PSKKKAKDRESEGWRDTHLQVDGPAVAEFQKLFLDTWARQKGPPLPARAYFPKLARQGNE CCHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IVRAIASEADEGDSPIYLTLLSAIEHAERSIRLTNAYFVPDPQLRRALAAASRRGVDVQI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHCCCCEEEE ILPSRTDSWAVFHAGRSHYDELLDAGVKIYERHGTVLHAKTASVDGVWSTIGSTNLDWRS EECCCCCCEEEEECCHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHCCCCCHHHH FLHNDELNAVVLGTDFARQLDAMFVRDRAASEKIDLEKWRRRALHIRMQEWIARRFEYWL HHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PHPSPSPIPRRSRGGIAGLTRILIACCAAPLCACATLPEAPRLAAGPVASPPVNFESAR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC GPVSARRNAAIFAELKRDGGDSAILLRHLALEEAVNRDSPLVVGNRLTLLQDGPATYRAM CCCHHCCCHHEEEEEHHCCCCHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCHHHHHH FAAIRSARDHVNLQTYIFEAGQTGETFARLLLEKQAAGVQVNIIYDSVGSIDTPPAFFQR HHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCHHHHHH LRDAGMRVLEFNPVNPAKLKKKKWRLNNRDHRKLLVVDGKTAFLGGINISETYSSGSLSR HHHCCCEEEEECCCCHHHHHHHHHCCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCC PSKKKAKDRESEGWRDTHLQVDGPAVAEFQKLFLDTWARQKGPPLPARAYFPKLARQGNE CCHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IVRAIASEADEGDSPIYLTLLSAIEHAERSIRLTNAYFVPDPQLRRALAAASRRGVDVQI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHCCCCEEEE ILPSRTDSWAVFHAGRSHYDELLDAGVKIYERHGTVLHAKTASVDGVWSTIGSTNLDWRS EECCCCCCEEEEECCHHHHHHHHHHHHHEEECCCCEEEEECCCCCHHHHHHCCCCCHHHH FLHNDELNAVVLGTDFARQLDAMFVRDRAASEKIDLEKWRRRALHIRMQEWIARRFEYWL HHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Phosphatidylglycerol [C]
Specific reaction: 2 Phosphatidylglycerol = Biphosphatidylglycerol + Glycerol. [C]
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA